| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is ugl [H]
Identifier: 86361048
GI number: 86361048
Start: 357197
End: 358369
Strand: Direct
Name: ugl [H]
Synonym: RHE_PF00318
Alternate gene names: 86361048
Gene position: 357197-358369 (Clockwise)
Preceding gene: 86361047
Following gene: 86361049
Centisome position: 55.59
GC content: 63.17
Gene sequence:
>1173_bases ATGAATGCCGTTTCAACAGTCGCCCCGCAGCCGATCACCGATAAGCAAGTGAATGCCGCGCTCGACCTTGCCGTCGAGCA GGTCAGGCGCAACCTTCCTCAGTTCACTTATGCCGCGCAGAACCATTCGAGCGTCAACAACTTTTATCCCGCCGTCGCCA ACGACCAATGGACGGCGGGCTTCTGGCCGGGCGAGCTGTGGCTCGCCTTCGAGCATAGCGGCGATCCGGTGTTCCGGCAT GCCGCGCAGATCCAGGTCCAGTCCTTCCTGCATCGGATCGTCAACCGCATCGAGACCGATCATCACGACATGGGCTTTCT CTATTCGCCCTCCTGCATCGCCGCCTGGAAGCTCGTCGGCGACGAGGACGGCCGCAAGGCGGCGATCCTGGCCGCCGACC AACTGATCGAGCGCTTCCAGCCGATCGGCCAGTTCATCCAAGCCTGGGGCCGCAAGGGCAGACCGGAGGAATACCGCTAC ATCATCGACTGCCTGCTGAACCTGCCGCTTCTCTACTGGGCCAGCAGCGAGACGGGCGACCCGAAATACCGCGAGATCGC GCTCACGCACGCTCGCACGACGCTCGCCCATTCGGTGCGGCCGGACGATTCCACCTATCACACCTTCTATATGGACCCGG TCACCGGCGCGCCTGTGCGCGGCGCCACCAAACAGGGCTACCGGGACGACAGTTTCTGGGCGCGCGGACAGGCCTGGGCC ATCGCGGGCATGGCGATTTCCTATCGCTACGAGCGGATCGAGGAATATCGCCAGACCTTCGACCGGCTGCTCGCCTTCTA CCTCAACCGGCTGCCGGCCGACATGGTGCCCTATTGGGATCTCGTCTTTTCGGACGGCGACGGCGAGCCGCGCGACAGTT CCTCGGCTTCGATCACCGCCTGCGGCCTGCTCGAGATGGCCGATCTCGTCGAGGCCGAAGCCGCCGAACGCTACCGTGTG CTGGCGCGGCGCATGGTGAAGAGCCTTGCCGACCACTATGCGGTCAAGGACCCCGCGGTTTCAAACGGCCTGGTGCTGCA CGCCACCTATTCGAAGAAATCGCCCTTCAACACCTGCCGCGGTGAGGGCGTCGATGAATGCGTCTCCTGGGGAGATTATT ATTACATGGAAGCTTTGACGCGCCTTTCGCGCCGCTGGTCTTCCTATTGGTGA
Upstream 100 bases:
>100_bases GCCTCCGTCGTCGCCCTCGTGCCCGTTCTCATCGTCTTCCTCTCTCTGCAGCGCTTCTTTGTCGAGGGCATCGCCTCAAC GGGATTGAAGGGTTAAAGCC
Downstream 100 bases:
>100_bases GGTCAGGAGAACCCGATGGCCAGCATTTCGCTTAAAGAGCTGAACAAATCCTACGGCGCGCTTACCGTCGTCCACGATAT CGATCTGGAAATTGCCGATA
Product: putative glucoronyl hydrolase protein
Products: NA
Alternate protein names: UGL; Glycosaminoglycan hydrolase; Glycuronidase; Unsaturated uronic acid hydrolase [H]
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MNAVSTVAPQPITDKQVNAALDLAVEQVRRNLPQFTYAAQNHSSVNNFYPAVANDQWTAGFWPGELWLAFEHSGDPVFRH AAQIQVQSFLHRIVNRIETDHHDMGFLYSPSCIAAWKLVGDEDGRKAAILAADQLIERFQPIGQFIQAWGRKGRPEEYRY IIDCLLNLPLLYWASSETGDPKYREIALTHARTTLAHSVRPDDSTYHTFYMDPVTGAPVRGATKQGYRDDSFWARGQAWA IAGMAISYRYERIEEYRQTFDRLLAFYLNRLPADMVPYWDLVFSDGDGEPRDSSSASITACGLLEMADLVEAEAAERYRV LARRMVKSLADHYAVKDPAVSNGLVLHATYSKKSPFNTCRGEGVDECVSWGDYYYMEALTRLSRRWSSYW
Sequences:
>Translated_390_residues MNAVSTVAPQPITDKQVNAALDLAVEQVRRNLPQFTYAAQNHSSVNNFYPAVANDQWTAGFWPGELWLAFEHSGDPVFRH AAQIQVQSFLHRIVNRIETDHHDMGFLYSPSCIAAWKLVGDEDGRKAAILAADQLIERFQPIGQFIQAWGRKGRPEEYRY IIDCLLNLPLLYWASSETGDPKYREIALTHARTTLAHSVRPDDSTYHTFYMDPVTGAPVRGATKQGYRDDSFWARGQAWA IAGMAISYRYERIEEYRQTFDRLLAFYLNRLPADMVPYWDLVFSDGDGEPRDSSSASITACGLLEMADLVEAEAAERYRV LARRMVKSLADHYAVKDPAVSNGLVLHATYSKKSPFNTCRGEGVDECVSWGDYYYMEALTRLSRRWSSYW >Mature_390_residues MNAVSTVAPQPITDKQVNAALDLAVEQVRRNLPQFTYAAQNHSSVNNFYPAVANDQWTAGFWPGELWLAFEHSGDPVFRH AAQIQVQSFLHRIVNRIETDHHDMGFLYSPSCIAAWKLVGDEDGRKAAILAADQLIERFQPIGQFIQAWGRKGRPEEYRY IIDCLLNLPLLYWASSETGDPKYREIALTHARTTLAHSVRPDDSTYHTFYMDPVTGAPVRGATKQGYRDDSFWARGQAWA IAGMAISYRYERIEEYRQTFDRLLAFYLNRLPADMVPYWDLVFSDGDGEPRDSSSASITACGLLEMADLVEAEAAERYRV LARRMVKSLADHYAVKDPAVSNGLVLHATYSKKSPFNTCRGEGVDECVSWGDYYYMEALTRLSRRWSSYW
Specific function: Catalyzes the hydrolysis of oligosaccharides with unsaturated glucuronyl residues at the non-reducing terminal, to a sugar or an amino sugar, and an unsaturated D-glucuronic acid (GlcA), which is nonenzymatically converted immediately to alpha- keto acid
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 88 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR010905 [H]
Pfam domain/function: PF07470 Glyco_hydro_88 [H]
EC number: NA
Molecular weight: Translated: 44410; Mature: 44410
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAVSTVAPQPITDKQVNAALDLAVEQVRRNLPQFTYAAQNHSSVNNFYPAVANDQWTAG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHCCCCCCCCCCCCC FWPGELWLAFEHSGDPVFRHAAQIQVQSFLHRIVNRIETDHHDMGFLYSPSCIAAWKLVG CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHEEEC DEDGRKAAILAADQLIERFQPIGQFIQAWGRKGRPEEYRYIIDCLLNLPLLYWASSETGD CCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEECCCCCC PKYREIALTHARTTLAHSVRPDDSTYHTFYMDPVTGAPVRGATKQGYRDDSFWARGQAWA CHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHCCCCCEE IAGMAISYRYERIEEYRQTFDRLLAFYLNRLPADMVPYWDLVFSDGDGEPRDSSSASITA EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEECCCCCCCCCCCCCCHH CGLLEMADLVEAEAAERYRVLARRMVKSLADHYAVKDPAVSNGLVLHATYSKKSPFNTCR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHC GEGVDECVSWGDYYYMEALTRLSRRWSSYW CCCHHHHHHCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNAVSTVAPQPITDKQVNAALDLAVEQVRRNLPQFTYAAQNHSSVNNFYPAVANDQWTAG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHCCCCCCCCCCCCC FWPGELWLAFEHSGDPVFRHAAQIQVQSFLHRIVNRIETDHHDMGFLYSPSCIAAWKLVG CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHEEEC DEDGRKAAILAADQLIERFQPIGQFIQAWGRKGRPEEYRYIIDCLLNLPLLYWASSETGD CCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEECCCCCC PKYREIALTHARTTLAHSVRPDDSTYHTFYMDPVTGAPVRGATKQGYRDDSFWARGQAWA CHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHCCCCCEE IAGMAISYRYERIEEYRQTFDRLLAFYLNRLPADMVPYWDLVFSDGDGEPRDSSSASITA EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEECCCCCCCCCCCCCCHH CGLLEMADLVEAEAAERYRVLARRMVKSLADHYAVKDPAVSNGLVLHATYSKKSPFNTCR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHC GEGVDECVSWGDYYYMEALTRLSRRWSSYW CCCHHHHHHCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10441389 [H]