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The map label for this gene is ytlD [H]

Identifier: 86361039

GI number: 86361039

Start: 347540

End: 348421

Strand: Direct

Name: ytlD [H]

Synonym: RHE_PF00309

Alternate gene names: 86361039

Gene position: 347540-348421 (Clockwise)

Preceding gene: 86361038

Following gene: 86361042

Centisome position: 54.09

GC content: 61.34

Gene sequence:

>882_bases
ATGGCACACATCACGCTCGAGGCCGGTTCGACCGCTCTCTTTCGCCCGGGCACATCGGATGCCGAAATCGAAGCCTCAGC
ACTGAAGGCCATGCGCCGGCGCAACACGCTGGTGCGCTTCTGGCAGATCGCCATCCTGGTCTTCGTGATCGGCATGTGGG
AGCTTGCCTCCAACATGCAGTGGATCGACCCGTTCTTCTACTCGAGCCCGAGCGGCGTTCTCGAGCGCCTTTACGAATGG
GCGACAGAGGGCACGACCGAAGGATCGCTCTGGTATAATCTCTGGGTGACGATGGAGGAGGCGCTGATCGGCTTCTTCGC
CGGCTCGATCACCGGCGTCTTCGTCGGCATCGGCCTCGGCCGCAACCGTTTCCTGTCGGATATCTTCTCCGTCTACATCA
AGGCGATCAACTCGATCCCGCGCGTCGTCCTGGCCCCAATCTTCATCATGATCATGGGTCTCGGCCTGCCGTCCAAGGTG
GCGCTCGCCTTCATCATGGTGTTCTTCGTCGTCTTCGCCAACGCCTTCCAGGGCGTGCGCGAAGCCGACCGCAACATGAT
CGCCAACGCCCGCATTCTCGGCGCTTCCGACTGGCAGGTGACGCGCACGGTGGTCATTCCCTCGGCGATGAGCTGGATCT
TCGCGAGCCTCCACGTCTCCTTCGGCTTTGCGATCATCGGTGCAATCGTCGGCGAATTCGTCGGCGCCCGCTTCGGCATC
GGTCAGTTGATCTCGATCGCCAAGGGCACGTTCGATGCGGCCGGCATGTTCGCGGCCATCCTCCTCGTCATGGTCGTCAC
GCTTTTTGCCGAATACATCATGACGCTGATCGAAAACCGCCTGGCGAAATGGCGGCCGCAGCAGCACCTCGATACGCAAT
AA

Upstream 100 bases:

>100_bases
AGAGCTTCATCGATTACTGCAAGACGATCTGGGAAGACCTGCGCGAAGAGGTCGAGACCAGCTACCGCCGCGCAAGCGAA
GCAGCCTGAGGGAGGATATC

Downstream 100 bases:

>100_bases
ATCCGCCTCCTCCCAAGGCAGATCGAAGCGAAGGCCGGGCGCCATGCCCGGCCTTTCGTTTGATGGCAAAAATCGTTCTT
TGCCCCGCGTCATCCGGCAC

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MAHITLEAGSTALFRPGTSDAEIEASALKAMRRRNTLVRFWQIAILVFVIGMWELASNMQWIDPFFYSSPSGVLERLYEW
ATEGTTEGSLWYNLWVTMEEALIGFFAGSITGVFVGIGLGRNRFLSDIFSVYIKAINSIPRVVLAPIFIMIMGLGLPSKV
ALAFIMVFFVVFANAFQGVREADRNMIANARILGASDWQVTRTVVIPSAMSWIFASLHVSFGFAIIGAIVGEFVGARFGI
GQLISIAKGTFDAAGMFAAILLVMVVTLFAEYIMTLIENRLAKWRPQQHLDTQ

Sequences:

>Translated_293_residues
MAHITLEAGSTALFRPGTSDAEIEASALKAMRRRNTLVRFWQIAILVFVIGMWELASNMQWIDPFFYSSPSGVLERLYEW
ATEGTTEGSLWYNLWVTMEEALIGFFAGSITGVFVGIGLGRNRFLSDIFSVYIKAINSIPRVVLAPIFIMIMGLGLPSKV
ALAFIMVFFVVFANAFQGVREADRNMIANARILGASDWQVTRTVVIPSAMSWIFASLHVSFGFAIIGAIVGEFVGARFGI
GQLISIAKGTFDAAGMFAAILLVMVVTLFAEYIMTLIENRLAKWRPQQHLDTQ
>Mature_292_residues
AHITLEAGSTALFRPGTSDAEIEASALKAMRRRNTLVRFWQIAILVFVIGMWELASNMQWIDPFFYSSPSGVLERLYEWA
TEGTTEGSLWYNLWVTMEEALIGFFAGSITGVFVGIGLGRNRFLSDIFSVYIKAINSIPRVVLAPIFIMIMGLGLPSKVA
LAFIMVFFVVFANAFQGVREADRNMIANARILGASDWQVTRTVVIPSAMSWIFASLHVSFGFAIIGAIVGEFVGARFGIG
QLISIAKGTFDAAGMFAAILLVMVVTLFAEYIMTLIENRLAKWRPQQHLDTQ

Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1786564, Length=245, Percent_Identity=27.3469387755102, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI87081802, Length=245, Percent_Identity=26.9387755102041, Blast_Score=92, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32415; Mature: 32283

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHITLEAGSTALFRPGTSDAEIEASALKAMRRRNTLVRFWQIAILVFVIGMWELASNMQ
CCEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
WIDPFFYSSPSGVLERLYEWATEGTTEGSLWYNLWVTMEEALIGFFAGSITGVFVGIGLG
HHCHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RNRFLSDIFSVYIKAINSIPRVVLAPIFIMIMGLGLPSKVALAFIMVFFVVFANAFQGVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
EADRNMIANARILGASDWQVTRTVVIPSAMSWIFASLHVSFGFAIIGAIVGEFVGARFGI
HHHHHHHHCCEEECCCCCCEEHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
GQLISIAKGTFDAAGMFAAILLVMVVTLFAEYIMTLIENRLAKWRPQQHLDTQ
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AHITLEAGSTALFRPGTSDAEIEASALKAMRRRNTLVRFWQIAILVFVIGMWELASNMQ
CEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
WIDPFFYSSPSGVLERLYEWATEGTTEGSLWYNLWVTMEEALIGFFAGSITGVFVGIGLG
HHCHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RNRFLSDIFSVYIKAINSIPRVVLAPIFIMIMGLGLPSKVALAFIMVFFVVFANAFQGVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
EADRNMIANARILGASDWQVTRTVVIPSAMSWIFASLHVSFGFAIIGAIVGEFVGARFGI
HHHHHHHHCCEEECCCCCCEEHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
GQLISIAKGTFDAAGMFAAILLVMVVTLFAEYIMTLIENRLAKWRPQQHLDTQ
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]