| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is 86360981
Identifier: 86360981
GI number: 86360981
Start: 269198
End: 269533
Strand: Direct
Name: 86360981
Synonym: RHE_PF00251
Alternate gene names: NA
Gene position: 269198-269533 (Clockwise)
Preceding gene: 86360980
Following gene: 86360986
Centisome position: 41.9
GC content: 61.01
Gene sequence:
>336_bases TTGCCGCCGCTTAGAGCGTTTCTCCGCCTTCGTTGCCATGTTCAAACGTGTGCGGGTGCGTCAGTGATGGCTGTAGAGCG GCGGCGCGACCTCTTCATCGGCGAGTTCCGGGTAAAGATGTCTGCGCGTGCGGGCGAGCGATTCCGCCTCCCGGCGGTTC CGCTCCAGCAGCACTGCAGTAACATCCTTGTACGGTTCGCTCTCCGATACGGCGACGCGGACAGTTCCGCCCTGCGAGAG GAAGTCGCAGAACGACCGTACCGAGCGAAGACGCGTCGTAATCTCGACGTAGCGATCGTCATGTCCAGCCATGTTCGCCT CCGTTTAAAGCAGTAG
Upstream 100 bases:
>100_bases GAGGAAACCAGCGCAGCGACGAAGGAACTTGCCGATGAGACCAGAACGCTCCTGCAACTGATCGACCAGTTCCAGCTGGA TCAAGCCGGCGCAGGCCGCG
Downstream 100 bases:
>100_bases CATGTCACGAACACTTCGGCGAGATGATGGCGTCCGTTCCAGGGTGAAGAATCCGACGCGCGATCTCACGCAGAACCATC CGCGCGCCGTCACCGCCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MPPLRAFLRLRCHVQTCAGASVMAVERRRDLFIGEFRVKMSARAGERFRLPAVPLQQHCSNILVRFALRYGDADSSALRE EVAERPYRAKTRRNLDVAIVMSSHVRLRLKQ
Sequences:
>Translated_111_residues MPPLRAFLRLRCHVQTCAGASVMAVERRRDLFIGEFRVKMSARAGERFRLPAVPLQQHCSNILVRFALRYGDADSSALRE EVAERPYRAKTRRNLDVAIVMSSHVRLRLKQ >Mature_110_residues PPLRAFLRLRCHVQTCAGASVMAVERRRDLFIGEFRVKMSARAGERFRLPAVPLQQHCSNILVRFALRYGDADSSALREE VAERPYRAKTRRNLDVAIVMSSHVRLRLKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12792; Mature: 12661
Theoretical pI: Translated: 11.82; Mature: 11.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPLRAFLRLRCHVQTCAGASVMAVERRRDLFIGEFRVKMSARAGERFRLPAVPLQQHCS CCHHHHHHHHHHHHHHCCCCHHEEHHHHCCCEEEHHEEEEECCCCCEEECCCCCHHHHHH NILVRFALRYGDADSSALREEVAERPYRAKTRRNLDVAIVMSSHVRLRLKQ HHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHCCCCEEEEEEECCEEEEECC >Mature Secondary Structure PPLRAFLRLRCHVQTCAGASVMAVERRRDLFIGEFRVKMSARAGERFRLPAVPLQQHCS CHHHHHHHHHHHHHHCCCCHHEEHHHHCCCEEEHHEEEEECCCCCEEECCCCCHHHHHH NILVRFALRYGDADSSALREEVAERPYRAKTRRNLDVAIVMSSHVRLRLKQ HHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHCCCCEEEEEEECCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA