| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is flgK
Identifier: 86360903
GI number: 86360903
Start: 181690
End: 183051
Strand: Direct
Name: flgK
Synonym: RHE_PF00172
Alternate gene names: 86360903
Gene position: 181690-183051 (Clockwise)
Preceding gene: 86360902
Following gene: 86360904
Centisome position: 28.28
GC content: 62.7
Gene sequence:
>1362_bases ATGTCGCTCACGTCAGCCTTGAACAGCGTGCAGAGTATTTTCAACAATACCGGCCAGCAGAGCAGCGTCGTCTCGACCAA CATCGCCAATGTCGGAAATTCCGACTATGTCAGGCGGGAGGCGTCGATCACGACGTCTCTTTCCGGCGCTCAGGTCGTCA GCATCAGCCGGGCGCAGGAAACTGCGCTGCTCGCCCAGTACCTGCAATCCAACGCCAAGGACAGCGCCCAGCAGACGCTC GTGACCGGTCTCGAAAGCCTGCAGTCGCTGATGGGCGGCAATGACTACGAGACATCGCCGAGCACCTATCTCGCGGCCTT CCAGGAGGCGCTCCAGACATATGCGACGTCGCCGAGCAACACGACCGCAGCGCAATCGGCGGTCACCGCCGCGCAGGATC TCGCCAATTCGCTGAATACCGCAACCGACGGCGTCCAGTCGATCAGGGCAGAGGCGGATGCGGAGATCGCCACACAGGTC TCCACGCTGAATACGCTGCTGTCGCAGTTCGAGGCGGCCAACAACGCGGTCAAGCTGGCGACATCGACCGGCGCCGATAC ATCTACGGCGCTCGACGCGCGCGAGAAGCTCCTGAAGCAGATCTCCTCGATCGTCGGCGTCACCTCCGTCGTGCGCGACA ATAACGACATGGCGCTCTATACCTCGGACGGCACCGTGCTGTTCGAGACCATGCCGCGCACCGTCACATTCGCGTCGACG GCAACTTATGTCGCCGGAACCGAGGGCAATGCCATCTATATCGACGGCGTGGCGCTCGATGCCGGCGAGGGTTCGACGAC GAGCGCCTCGGGCAGCCTGCAGGCGCTGCTGCAGCTCCGCGACGAGATCGCCCCGACATTCCAGGACCAGCTCGACCAGA TCGCCAAGGCCCTCGTCCAGGTCTTCTCGGAAACCGACGGCAGCACGAGCGCGCCGGGACTTTTTACCTGGACGACGGCA TCGGGGACAACGGGAGAAACACCGTCTGATACCGACGATGTTACCGGGATTGCCTCCACCATCTCGGTCAATCCCGCCGT CGTCACGAGCGAAGGCGGCGATGCGACCAAGCTGCGCGACGGAACGATCAGCGGCATCACCAATCTCAACACCTCCGGAG ATAGCGGTTTTTCCGACAATCTCGACGCCCTCTATCAGGCGCTGACGGAACAACGCTCGTTCTCCGCCGACGCCGGTCTC TCCACAACGCAAAGCCTGAGGGACTATGCCAGCGCCCCATCGGCTGGCTCGAACAATATCGAAGCGACGCGACGTCGGCC TCAGAAACCACGGCCGCCGCGCTGTCTCGCTCCGACGAGGCCTATTCCAACGAAACCGGCGTCAATCTCGACGAGGAGCT GA
Upstream 100 bases:
>100_bases GAGGCGCAGCGCAGCTACACCGCCAATTCGAAGGTGTTTCAGACCGGCTCCGACATCATGGATGTCCTCGTCAATCTGAA GCGATAGAGGGAACGCCTGG
Downstream 100 bases:
>100_bases CGCTGCTTCTCGACATCGAACAATCCTATAAAGCGGCGACGAAGATCCTGAACGTCATCGACGAGATGTTCCAGTCGCTC CTCGACATAGCGAGCTAGTC
Product: flagellar hook-associated protein FlgK
Products: NA
Alternate protein names: Flagellar Hook-Associated Protein; Flagellar Hook-Associated FlgK
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MSLTSALNSVQSIFNNTGQQSSVVSTNIANVGNSDYVRREASITTSLSGAQVVSISRAQETALLAQYLQSNAKDSAQQTL VTGLESLQSLMGGNDYETSPSTYLAAFQEALQTYATSPSNTTAAQSAVTAAQDLANSLNTATDGVQSIRAEADAEIATQV STLNTLLSQFEAANNAVKLATSTGADTSTALDAREKLLKQISSIVGVTSVVRDNNDMALYTSDGTVLFETMPRTVTFAST ATYVAGTEGNAIYIDGVALDAGEGSTTSASGSLQALLQLRDEIAPTFQDQLDQIAKALVQVFSETDGSTSAPGLFTWTTA SGTTGETPSDTDDVTGIASTISVNPAVVTSEGGDATKLRDGTISGITNLNTSGDSGFSDNLDALYQALTEQRSFSADAGL STTQSLRDYASAPSAGSNNIEATRRRPQKPRPPRCLAPTRPIPTKPASISTRS
Sequences:
>Translated_453_residues MSLTSALNSVQSIFNNTGQQSSVVSTNIANVGNSDYVRREASITTSLSGAQVVSISRAQETALLAQYLQSNAKDSAQQTL VTGLESLQSLMGGNDYETSPSTYLAAFQEALQTYATSPSNTTAAQSAVTAAQDLANSLNTATDGVQSIRAEADAEIATQV STLNTLLSQFEAANNAVKLATSTGADTSTALDAREKLLKQISSIVGVTSVVRDNNDMALYTSDGTVLFETMPRTVTFAST ATYVAGTEGNAIYIDGVALDAGEGSTTSASGSLQALLQLRDEIAPTFQDQLDQIAKALVQVFSETDGSTSAPGLFTWTTA SGTTGETPSDTDDVTGIASTISVNPAVVTSEGGDATKLRDGTISGITNLNTSGDSGFSDNLDALYQALTEQRSFSADAGL STTQSLRDYASAPSAGSNNIEATRRRPQKPRPPRCLAPTRPIPTKPASISTRS >Mature_452_residues SLTSALNSVQSIFNNTGQQSSVVSTNIANVGNSDYVRREASITTSLSGAQVVSISRAQETALLAQYLQSNAKDSAQQTLV TGLESLQSLMGGNDYETSPSTYLAAFQEALQTYATSPSNTTAAQSAVTAAQDLANSLNTATDGVQSIRAEADAEIATQVS TLNTLLSQFEAANNAVKLATSTGADTSTALDAREKLLKQISSIVGVTSVVRDNNDMALYTSDGTVLFETMPRTVTFASTA TYVAGTEGNAIYIDGVALDAGEGSTTSASGSLQALLQLRDEIAPTFQDQLDQIAKALVQVFSETDGSTSAPGLFTWTTAS GTTGETPSDTDDVTGIASTISVNPAVVTSEGGDATKLRDGTISGITNLNTSGDSGFSDNLDALYQALTEQRSFSADAGLS TTQSLRDYASAPSAGSNNIEATRRRPQKPRPPRCLAPTRPIPTKPASISTRS
Specific function: Unknown
COG id: COG1256
COG function: function code N; Flagellar hook-associated protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46991; Mature: 46859
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTSALNSVQSIFNNTGQQSSVVSTNIANVGNSDYVRREASITTSLSGAQVVSISRAQE CCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEHHHHHH TALLAQYLQSNAKDSAQQTLVTGLESLQSLMGGNDYETSPSTYLAAFQEALQTYATSPSN HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCC TTAAQSAVTAAQDLANSLNTATDGVQSIRAEADAEIATQVSTLNTLLSQFEAANNAVKLA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE TSTGADTSTALDAREKLLKQISSIVGVTSVVRDNNDMALYTSDGTVLFETMPRTVTFAST ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCEEEEECC ATYVAGTEGNAIYIDGVALDAGEGSTTSASGSLQALLQLRDEIAPTFQDQLDQIAKALVQ EEEEECCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH VFSETDGSTSAPGLFTWTTASGTTGETPSDTDDVTGIASTISVNPAVVTSEGGDATKLRD HHHCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHEECCCEEEECCCCCCCEECC GTISGITNLNTSGDSGFSDNLDALYQALTEQRSFSADAGLSTTQSLRDYASAPSAGSNNI CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCC EATRRRPQKPRPPRCLAPTRPIPTKPASISTRS HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SLTSALNSVQSIFNNTGQQSSVVSTNIANVGNSDYVRREASITTSLSGAQVVSISRAQE CHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEHHHHHH TALLAQYLQSNAKDSAQQTLVTGLESLQSLMGGNDYETSPSTYLAAFQEALQTYATSPSN HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCC TTAAQSAVTAAQDLANSLNTATDGVQSIRAEADAEIATQVSTLNTLLSQFEAANNAVKLA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE TSTGADTSTALDAREKLLKQISSIVGVTSVVRDNNDMALYTSDGTVLFETMPRTVTFAST ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCEEEEECC ATYVAGTEGNAIYIDGVALDAGEGSTTSASGSLQALLQLRDEIAPTFQDQLDQIAKALVQ EEEEECCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH VFSETDGSTSAPGLFTWTTASGTTGETPSDTDDVTGIASTISVNPAVVTSEGGDATKLRD HHHCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHEECCCEEEECCCCCCCEECC GTISGITNLNTSGDSGFSDNLDALYQALTEQRSFSADAGLSTTQSLRDYASAPSAGSNNI CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCC EATRRRPQKPRPPRCLAPTRPIPTKPASISTRS HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA