| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is 86360870
Identifier: 86360870
GI number: 86360870
Start: 145599
End: 145982
Strand: Direct
Name: 86360870
Synonym: RHE_PF00139
Alternate gene names: NA
Gene position: 145599-145982 (Clockwise)
Preceding gene: 86360869
Following gene: 86360871
Centisome position: 22.66
GC content: 64.32
Gene sequence:
>384_bases ATGTTAGCGGGATCCGCGGGCCTTGTGGCCGGCCGGTTCGCTATCGAGCTCGTCAACTCACTTCTGCCACCTGACCTGCA AGGCGTTCAGGGCGGCGACAAGATCACTCTGTCACCCTTCTTATCATTCGACGCCGATGGCGTTGCAGGCTCTCTGCGCG CGCAGCAGTCCGACGTGGCCTTCGGCCCCCGGCGCCTTCCGACGGTTCGCCAACGGCGGTCGGCCGTTCTGCCCAAGTGC AGCAACACCGAAGCGTACGGCATCCCTCGCCGGCGACTCCGCCGCTGCGGCGACCGCTTGCGCGAACTCTCGGTCACCTG TGTCCCACTCACTCATACTCCACGAGGCTGCATAGAAGGCACGATCTCTCACCTATCCGGATGA
Upstream 100 bases:
>100_bases GAAAGACATTGCGCCGGAAGCAGTGCTGGATCGCATCCAGGCGGAAGGGGAAGACAAGTAGAAGTGTTCGTGTTGGCTGC GAAGTGGGACTCCCGGGCTG
Downstream 100 bases:
>100_bases TTGCCGTTACAGGTTTAGTTTGTAGTAATACTAGGTTTCTGACCAATCTTGGGAAGAGTGTCGTTGATTATGGCTAGATC TTCTCGAAAAAATATCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MLAGSAGLVAGRFAIELVNSLLPPDLQGVQGGDKITLSPFLSFDADGVAGSLRAQQSDVAFGPRRLPTVRQRRSAVLPKC SNTEAYGIPRRRLRRCGDRLRELSVTCVPLTHTPRGCIEGTISHLSG
Sequences:
>Translated_127_residues MLAGSAGLVAGRFAIELVNSLLPPDLQGVQGGDKITLSPFLSFDADGVAGSLRAQQSDVAFGPRRLPTVRQRRSAVLPKC SNTEAYGIPRRRLRRCGDRLRELSVTCVPLTHTPRGCIEGTISHLSG >Mature_127_residues MLAGSAGLVAGRFAIELVNSLLPPDLQGVQGGDKITLSPFLSFDADGVAGSLRAQQSDVAFGPRRLPTVRQRRSAVLPKC SNTEAYGIPRRRLRRCGDRLRELSVTCVPLTHTPRGCIEGTISHLSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13581; Mature: 13581
Theoretical pI: Translated: 10.75; Mature: 10.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAGSAGLVAGRFAIELVNSLLPPDLQGVQGGDKITLSPFLSFDADGVAGSLRAQQSDVA CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHCCCCCCC FGPRRLPTVRQRRSAVLPKCSNTEAYGIPRRRLRRCGDRLRELSVTCVPLTHTPRGCIEG CCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHH TISHLSG HHHHCCC >Mature Secondary Structure MLAGSAGLVAGRFAIELVNSLLPPDLQGVQGGDKITLSPFLSFDADGVAGSLRAQQSDVA CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHCCCCCCC FGPRRLPTVRQRRSAVLPKCSNTEAYGIPRRRLRRCGDRLRELSVTCVPLTHTPRGCIEG CCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHH TISHLSG HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA