Definition Rhizobium etli CFN 42 plasmid p42f, complete sequence.
Accession NC_007766
Length 642,517

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The map label for this gene is 86360859

Identifier: 86360859

GI number: 86360859

Start: 136269

End: 136700

Strand: Direct

Name: 86360859

Synonym: RHE_PF00128

Alternate gene names: NA

Gene position: 136269-136700 (Clockwise)

Preceding gene: 86360855

Following gene: 86360860

Centisome position: 21.21

GC content: 52.31

Gene sequence:

>432_bases
ATGCAATGTGAAACACGCAATTTCAATTTTTATAAGATATCTATAACAAAACCGAAAATTGCGGTTGCGTTTCCTGCAGC
GAGTGCCTACATGGCATCCATCGGCATCGCTGATGAGCGCTGGAAAACATCTGTCGCTCGCAATTGCCGCAATCGCTTTC
TGCTTTTGACCACGGATGTACTGGCACTGGTACGGCAGCGATGTGAGGAAGGTCGGCGCGGTCTCGCCCCGGCCTTTTTT
GTTGGCCGGCCCGCTGGCCGAGAACTTCGTTTAAACACAATGGCGGCCCACGTTGCCACACCGAGTTTGCTAGTCGAGCT
TCGTTTCGCGCCGATTGGCGTCAAGCAAACCTTTTCTCTCAAAATCGAACTTCGGTCTTCCGGGCGCCGTCCGGCAGCGA
TCACTCATACGACGAAAAGGAATCGAAAATGA

Upstream 100 bases:

>100_bases
CGGTCCTCCTTCAATTTGGGGCGAGGGCTCTGAGCCCTGATGCAGCAGCGCCCGTAACATTGGCTGCTGACGAAGTGACC
ATGCCTGAGCGCGGCTCCGG

Downstream 100 bases:

>100_bases
GCAAAACCAATGCGGCTGAGATCCGGCGCAGAACCGAACGCCAGGTTGCGAACACGAGCGGTGGCGGGCACTTGGGGGGA
ACAAACTTCGGGCAAGCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MQCETRNFNFYKISITKPKIAVAFPAASAYMASIGIADERWKTSVARNCRNRFLLLTTDVLALVRQRCEEGRRGLAPAFF
VGRPAGRELRLNTMAAHVATPSLLVELRFAPIGVKQTFSLKIELRSSGRRPAAITHTTKRNRK

Sequences:

>Translated_143_residues
MQCETRNFNFYKISITKPKIAVAFPAASAYMASIGIADERWKTSVARNCRNRFLLLTTDVLALVRQRCEEGRRGLAPAFF
VGRPAGRELRLNTMAAHVATPSLLVELRFAPIGVKQTFSLKIELRSSGRRPAAITHTTKRNRK
>Mature_143_residues
MQCETRNFNFYKISITKPKIAVAFPAASAYMASIGIADERWKTSVARNCRNRFLLLTTDVLALVRQRCEEGRRGLAPAFF
VGRPAGRELRLNTMAAHVATPSLLVELRFAPIGVKQTFSLKIELRSSGRRPAAITHTTKRNRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16062; Mature: 16062

Theoretical pI: Translated: 11.90; Mature: 11.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQCETRNFNFYKISITKPKIAVAFPAASAYMASIGIADERWKTSVARNCRNRFLLLTTDV
CCCCCCCCEEEEEEECCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEHHHH
LALVRQRCEEGRRGLAPAFFVGRPAGRELRLNTMAAHVATPSLLVELRFAPIGVKQTFSL
HHHHHHHHHHCCCCCCCEEEECCCCCCEEEEHHHHHHHCCCEEEEEEEECCCCCCEEEEE
KIELRSSGRRPAAITHTTKRNRK
EEEEECCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MQCETRNFNFYKISITKPKIAVAFPAASAYMASIGIADERWKTSVARNCRNRFLLLTTDV
CCCCCCCCEEEEEEECCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEHHHH
LALVRQRCEEGRRGLAPAFFVGRPAGRELRLNTMAAHVATPSLLVELRFAPIGVKQTFSL
HHHHHHHHHHCCCCCCCEEEECCCCCCEEEEHHHHHHHCCCEEEEEEEECCCCCCEEEEE
KIELRSSGRRPAAITHTTKRNRK
EEEEECCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA