Definition Rhizobium etli CFN 42 plasmid p42f, complete sequence.
Accession NC_007766
Length 642,517

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The map label for this gene is 86360842

Identifier: 86360842

GI number: 86360842

Start: 118986

End: 119567

Strand: Direct

Name: 86360842

Synonym: RHE_PF00109

Alternate gene names: NA

Gene position: 118986-119567 (Clockwise)

Preceding gene: 86360841

Following gene: 162329649

Centisome position: 18.52

GC content: 61.68

Gene sequence:

>582_bases
ATGAGCCGGCGCGAGGAGATTATCGTCGTCAGGTCACTTGCGGAATCGGACCTGGGTCTCTTCTCGGCGCACCGCCTTAG
CGCCACCAGCAAGCAGCGCGCGATCGCACTGACCACACCTGTCGCGCGCAAGCTCTTGAGCGCGCAGCTGTTCGAAAAAG
GCGGCGCGGACATGGATTTGATCTGTGTCTATGGCGGCTACGGAAACCGGGAACTCAGGAACATCGGCAAAGTCGGCAAG
AACTGGCGGCTGGGCGGCCGCAAGATCACCGCCAACGCTTGCGCCTTTCTCGACAGCAAGGATTTCGTGCTGCTGCGATC
TGTTGCGGGAAATGACGGCGTTCAGCCAATCCTGATGACGTTCATCGGCCGTCAACGCGAGCGTCTTCTCCACGCAGGGA
TCGTTGCCAGCCTTGTCAACGAATTCCGGGATAGCGTGGCCATGGTCTCAGTAGGGTCGGATGCCTTCAACGCGCTCTCA
GCTGCCTTTCCTGCCGTGCCAGCTGATCTGGCGATCGGCGCGCCTCTGGTTGAGGATGATGCCGTGCCCCCGGAGCAGGC
GGCTGGGAGCGATGGCCGATAG

Upstream 100 bases:

>100_bases
CGCCGCTGCTCGCTCGCGCGATCGCCCAGACCCTGCGCAGTCAGCTTGTCCGAGGAGTGGCAACAGAGGACCTGCCGCGC
GTGGCAGGTGCAGGTCGCTG

Downstream 100 bases:

>100_bases
ACTTACCCCGGAGCAGCGCCGGCTCAATATGAGCCGCATCCGCGCTAAGAATACAGCGCCAGAATGGATAATACGTCGGC
TTCTGCACAGCCGAGGTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MSRREEIIVVRSLAESDLGLFSAHRLSATSKQRAIALTTPVARKLLSAQLFEKGGADMDLICVYGGYGNRELRNIGKVGK
NWRLGGRKITANACAFLDSKDFVLLRSVAGNDGVQPILMTFIGRQRERLLHAGIVASLVNEFRDSVAMVSVGSDAFNALS
AAFPAVPADLAIGAPLVEDDAVPPEQAAGSDGR

Sequences:

>Translated_193_residues
MSRREEIIVVRSLAESDLGLFSAHRLSATSKQRAIALTTPVARKLLSAQLFEKGGADMDLICVYGGYGNRELRNIGKVGK
NWRLGGRKITANACAFLDSKDFVLLRSVAGNDGVQPILMTFIGRQRERLLHAGIVASLVNEFRDSVAMVSVGSDAFNALS
AAFPAVPADLAIGAPLVEDDAVPPEQAAGSDGR
>Mature_192_residues
SRREEIIVVRSLAESDLGLFSAHRLSATSKQRAIALTTPVARKLLSAQLFEKGGADMDLICVYGGYGNRELRNIGKVGKN
WRLGGRKITANACAFLDSKDFVLLRSVAGNDGVQPILMTFIGRQRERLLHAGIVASLVNEFRDSVAMVSVGSDAFNALSA
AFPAVPADLAIGAPLVEDDAVPPEQAAGSDGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20553; Mature: 20422

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRREEIIVVRSLAESDLGLFSAHRLSATSKQRAIALTTPVARKLLSAQLFEKGGADMDL
CCCCHHEEEEHHHHHCCCCHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHCCCCCEEE
ICVYGGYGNRELRNIGKVGKNWRLGGRKITANACAFLDSKDFVLLRSVAGNDGVQPILMT
EEEECCCCCHHHHHHHHCCCCCCCCCEEEECHHHEEECCCCEEEEEECCCCCCCHHHHHH
FIGRQRERLLHAGIVASLVNEFRDSVAMVSVGSDAFNALSAAFPAVPADLAIGAPLVEDD
HHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHCCCCCCHHHCCCCCCCCC
AVPPEQAAGSDGR
CCCCHHCCCCCCC
>Mature Secondary Structure 
SRREEIIVVRSLAESDLGLFSAHRLSATSKQRAIALTTPVARKLLSAQLFEKGGADMDL
CCCHHEEEEHHHHHCCCCHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHCCCCCEEE
ICVYGGYGNRELRNIGKVGKNWRLGGRKITANACAFLDSKDFVLLRSVAGNDGVQPILMT
EEEECCCCCHHHHHHHHCCCCCCCCCEEEECHHHEEECCCCEEEEEECCCCCCCHHHHHH
FIGRQRERLLHAGIVASLVNEFRDSVAMVSVGSDAFNALSAAFPAVPADLAIGAPLVEDD
HHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHCCCCCCHHHCCCCCCCCC
AVPPEQAAGSDGR
CCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA