| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is 86360834
Identifier: 86360834
GI number: 86360834
Start: 103080
End: 104036
Strand: Direct
Name: 86360834
Synonym: RHE_PF00101
Alternate gene names: NA
Gene position: 103080-104036 (Clockwise)
Preceding gene: 86360833
Following gene: 86360835
Centisome position: 16.04
GC content: 55.07
Gene sequence:
>957_bases ATGCATGACTGCAGACCGCCATCGCGCGCACTACGGCGGTGGCTTAAAATTTTTGACTCAGACCCGGTTGACGGCAGATA TGGGCATTTGCTCCTCGTTGAAAATCCCGAGAGAGATGATGACCTCGGCAACCAACTCAGGCCCTACTTCGAGTCAGCCC ATGGCGATGCCCGCGAGTATTTCGCTGGAGAAATTGGAATATCTCTTCACCCGGACGCCGATGAAGATGATGACGACGCG TCGTTGCTTTATCCCGGCTGTCTCCCCGACACAGCCAAACGCGGGCTGTTTGGCGAGGTAATGGCCGGCTTGGTCACCGA GCACTATGAATTCGTCGGGGGTCACGAATGGAAGGTCCCGATTTTCTTGTTTCGGTACCATGCCGACGTCGAAAAATACC TGTTTGATTTAGCTCGTGACGCTGCACGCGAGCGTGCGGTCTTTGGGCGGTTCGGATCTGATTTTATTGGCCTCAAACTC GATGACGACGGTGCGGTCGTTCGATTGATTGTCGGGGAAGCAAAGTGGAGAGCGGAACTGAGCGACAGCGAGGTCGAGAC GCTGATGCTCGGTAAGTGGAGAAAGAATAAGCGCACCGGGGAGCGAAAGCGCGCGGGAGGAATATGGTTCGAGATCAACC GCGATCTCGATGTCCCGCATGGGGTGCGCCAGCTGCAGAGGCTTCTGAAGGAGCGTGACCGAGATGGCCATGCCGCAGCG ATCGTTTCTATGGACAAGGCCTTGGCGTTGAAAAACCCGGTCCCAATGCCTCGCACCAACCTGATTATGATCGTTGGTAA CGGTAAGGCGACGAGAGACGAGGGCGAGCCGCTACTAGTATGGAAGACCATACCCGAAGAATATACCTCTCGACACGATC TCCAGGTCGTCGAAGTCATCCTGAAGGATGGTGAAGACCTGATCGATGAAATTTACGACCTTCTCTGGACGGTATGA
Upstream 100 bases:
>100_bases AAACCTTCGCGCGGGCGACAAGTTCCATTCGCTCTTCAAAAGACAAGCAAACCTCAGTATTGGCTATCGTAGAAATTGTA TTGGGGGAGGCCTCAAGCCT
Downstream 100 bases:
>100_bases TCATGGCTGAACGGGATCAAGAACGCTTGGAAGTCGCAAACACCGTTCGAACAGAGATCGGCATTGAGAATGTTTTGTCG GCTAGGCAGGCTCGCTCCTT
Product: putative aminotransferase protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MHDCRPPSRALRRWLKIFDSDPVDGRYGHLLLVENPERDDDLGNQLRPYFESAHGDAREYFAGEIGISLHPDADEDDDDA SLLYPGCLPDTAKRGLFGEVMAGLVTEHYEFVGGHEWKVPIFLFRYHADVEKYLFDLARDAARERAVFGRFGSDFIGLKL DDDGAVVRLIVGEAKWRAELSDSEVETLMLGKWRKNKRTGERKRAGGIWFEINRDLDVPHGVRQLQRLLKERDRDGHAAA IVSMDKALALKNPVPMPRTNLIMIVGNGKATRDEGEPLLVWKTIPEEYTSRHDLQVVEVILKDGEDLIDEIYDLLWTV
Sequences:
>Translated_318_residues MHDCRPPSRALRRWLKIFDSDPVDGRYGHLLLVENPERDDDLGNQLRPYFESAHGDAREYFAGEIGISLHPDADEDDDDA SLLYPGCLPDTAKRGLFGEVMAGLVTEHYEFVGGHEWKVPIFLFRYHADVEKYLFDLARDAARERAVFGRFGSDFIGLKL DDDGAVVRLIVGEAKWRAELSDSEVETLMLGKWRKNKRTGERKRAGGIWFEINRDLDVPHGVRQLQRLLKERDRDGHAAA IVSMDKALALKNPVPMPRTNLIMIVGNGKATRDEGEPLLVWKTIPEEYTSRHDLQVVEVILKDGEDLIDEIYDLLWTV >Mature_318_residues MHDCRPPSRALRRWLKIFDSDPVDGRYGHLLLVENPERDDDLGNQLRPYFESAHGDAREYFAGEIGISLHPDADEDDDDA SLLYPGCLPDTAKRGLFGEVMAGLVTEHYEFVGGHEWKVPIFLFRYHADVEKYLFDLARDAARERAVFGRFGSDFIGLKL DDDGAVVRLIVGEAKWRAELSDSEVETLMLGKWRKNKRTGERKRAGGIWFEINRDLDVPHGVRQLQRLLKERDRDGHAAA IVSMDKALALKNPVPMPRTNLIMIVGNGKATRDEGEPLLVWKTIPEEYTSRHDLQVVEVILKDGEDLIDEIYDLLWTV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36292; Mature: 36292
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS00387 PPASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDCRPPSRALRRWLKIFDSDPVDGRYGHLLLVENPERDDDLGNQLRPYFESAHGDAREY CCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHH FAGEIGISLHPDADEDDDDASLLYPGCLPDTAKRGLFGEVMAGLVTEHYEFVGGHEWKVP HHCCCCEEECCCCCCCCCCCEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEE IFLFRYHADVEKYLFDLARDAARERAVFGRFGSDFIGLKLDDDGAVVRLIVGEAKWRAEL EEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCHHHCCC SDSEVETLMLGKWRKNKRTGERKRAGGIWFEINRDLDVPHGVRQLQRLLKERDRDGHAAA CCCHHHHHHHCCCCCCCCCCCHHHCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEE IVSMDKALALKNPVPMPRTNLIMIVGNGKATRDEGEPLLVWKTIPEEYTSRHDLQVVEVI EEEHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCHHHCCCCHHHHHHHH LKDGEDLIDEIYDLLWTV HHCCHHHHHHHHHHHHCC >Mature Secondary Structure MHDCRPPSRALRRWLKIFDSDPVDGRYGHLLLVENPERDDDLGNQLRPYFESAHGDAREY CCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHH FAGEIGISLHPDADEDDDDASLLYPGCLPDTAKRGLFGEVMAGLVTEHYEFVGGHEWKVP HHCCCCEEECCCCCCCCCCCEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEE IFLFRYHADVEKYLFDLARDAARERAVFGRFGSDFIGLKLDDDGAVVRLIVGEAKWRAEL EEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCHHHCCC SDSEVETLMLGKWRKNKRTGERKRAGGIWFEINRDLDVPHGVRQLQRLLKERDRDGHAAA CCCHHHHHHHCCCCCCCCCCCHHHCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEE IVSMDKALALKNPVPMPRTNLIMIVGNGKATRDEGEPLLVWKTIPEEYTSRHDLQVVEVI EEEHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCHHHCCCCHHHHHHHH LKDGEDLIDEIYDLLWTV HHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA