Definition Rhizobium etli CFN 42 plasmid p42f, complete sequence.
Accession NC_007766
Length 642,517

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The map label for this gene is 86360834

Identifier: 86360834

GI number: 86360834

Start: 103080

End: 104036

Strand: Direct

Name: 86360834

Synonym: RHE_PF00101

Alternate gene names: NA

Gene position: 103080-104036 (Clockwise)

Preceding gene: 86360833

Following gene: 86360835

Centisome position: 16.04

GC content: 55.07

Gene sequence:

>957_bases
ATGCATGACTGCAGACCGCCATCGCGCGCACTACGGCGGTGGCTTAAAATTTTTGACTCAGACCCGGTTGACGGCAGATA
TGGGCATTTGCTCCTCGTTGAAAATCCCGAGAGAGATGATGACCTCGGCAACCAACTCAGGCCCTACTTCGAGTCAGCCC
ATGGCGATGCCCGCGAGTATTTCGCTGGAGAAATTGGAATATCTCTTCACCCGGACGCCGATGAAGATGATGACGACGCG
TCGTTGCTTTATCCCGGCTGTCTCCCCGACACAGCCAAACGCGGGCTGTTTGGCGAGGTAATGGCCGGCTTGGTCACCGA
GCACTATGAATTCGTCGGGGGTCACGAATGGAAGGTCCCGATTTTCTTGTTTCGGTACCATGCCGACGTCGAAAAATACC
TGTTTGATTTAGCTCGTGACGCTGCACGCGAGCGTGCGGTCTTTGGGCGGTTCGGATCTGATTTTATTGGCCTCAAACTC
GATGACGACGGTGCGGTCGTTCGATTGATTGTCGGGGAAGCAAAGTGGAGAGCGGAACTGAGCGACAGCGAGGTCGAGAC
GCTGATGCTCGGTAAGTGGAGAAAGAATAAGCGCACCGGGGAGCGAAAGCGCGCGGGAGGAATATGGTTCGAGATCAACC
GCGATCTCGATGTCCCGCATGGGGTGCGCCAGCTGCAGAGGCTTCTGAAGGAGCGTGACCGAGATGGCCATGCCGCAGCG
ATCGTTTCTATGGACAAGGCCTTGGCGTTGAAAAACCCGGTCCCAATGCCTCGCACCAACCTGATTATGATCGTTGGTAA
CGGTAAGGCGACGAGAGACGAGGGCGAGCCGCTACTAGTATGGAAGACCATACCCGAAGAATATACCTCTCGACACGATC
TCCAGGTCGTCGAAGTCATCCTGAAGGATGGTGAAGACCTGATCGATGAAATTTACGACCTTCTCTGGACGGTATGA

Upstream 100 bases:

>100_bases
AAACCTTCGCGCGGGCGACAAGTTCCATTCGCTCTTCAAAAGACAAGCAAACCTCAGTATTGGCTATCGTAGAAATTGTA
TTGGGGGAGGCCTCAAGCCT

Downstream 100 bases:

>100_bases
TCATGGCTGAACGGGATCAAGAACGCTTGGAAGTCGCAAACACCGTTCGAACAGAGATCGGCATTGAGAATGTTTTGTCG
GCTAGGCAGGCTCGCTCCTT

Product: putative aminotransferase protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MHDCRPPSRALRRWLKIFDSDPVDGRYGHLLLVENPERDDDLGNQLRPYFESAHGDAREYFAGEIGISLHPDADEDDDDA
SLLYPGCLPDTAKRGLFGEVMAGLVTEHYEFVGGHEWKVPIFLFRYHADVEKYLFDLARDAARERAVFGRFGSDFIGLKL
DDDGAVVRLIVGEAKWRAELSDSEVETLMLGKWRKNKRTGERKRAGGIWFEINRDLDVPHGVRQLQRLLKERDRDGHAAA
IVSMDKALALKNPVPMPRTNLIMIVGNGKATRDEGEPLLVWKTIPEEYTSRHDLQVVEVILKDGEDLIDEIYDLLWTV

Sequences:

>Translated_318_residues
MHDCRPPSRALRRWLKIFDSDPVDGRYGHLLLVENPERDDDLGNQLRPYFESAHGDAREYFAGEIGISLHPDADEDDDDA
SLLYPGCLPDTAKRGLFGEVMAGLVTEHYEFVGGHEWKVPIFLFRYHADVEKYLFDLARDAARERAVFGRFGSDFIGLKL
DDDGAVVRLIVGEAKWRAELSDSEVETLMLGKWRKNKRTGERKRAGGIWFEINRDLDVPHGVRQLQRLLKERDRDGHAAA
IVSMDKALALKNPVPMPRTNLIMIVGNGKATRDEGEPLLVWKTIPEEYTSRHDLQVVEVILKDGEDLIDEIYDLLWTV
>Mature_318_residues
MHDCRPPSRALRRWLKIFDSDPVDGRYGHLLLVENPERDDDLGNQLRPYFESAHGDAREYFAGEIGISLHPDADEDDDDA
SLLYPGCLPDTAKRGLFGEVMAGLVTEHYEFVGGHEWKVPIFLFRYHADVEKYLFDLARDAARERAVFGRFGSDFIGLKL
DDDGAVVRLIVGEAKWRAELSDSEVETLMLGKWRKNKRTGERKRAGGIWFEINRDLDVPHGVRQLQRLLKERDRDGHAAA
IVSMDKALALKNPVPMPRTNLIMIVGNGKATRDEGEPLLVWKTIPEEYTSRHDLQVVEVILKDGEDLIDEIYDLLWTV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36292; Mature: 36292

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS00387 PPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDCRPPSRALRRWLKIFDSDPVDGRYGHLLLVENPERDDDLGNQLRPYFESAHGDAREY
CCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHH
FAGEIGISLHPDADEDDDDASLLYPGCLPDTAKRGLFGEVMAGLVTEHYEFVGGHEWKVP
HHCCCCEEECCCCCCCCCCCEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEE
IFLFRYHADVEKYLFDLARDAARERAVFGRFGSDFIGLKLDDDGAVVRLIVGEAKWRAEL
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCHHHCCC
SDSEVETLMLGKWRKNKRTGERKRAGGIWFEINRDLDVPHGVRQLQRLLKERDRDGHAAA
CCCHHHHHHHCCCCCCCCCCCHHHCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEE
IVSMDKALALKNPVPMPRTNLIMIVGNGKATRDEGEPLLVWKTIPEEYTSRHDLQVVEVI
EEEHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCHHHCCCCHHHHHHHH
LKDGEDLIDEIYDLLWTV
HHCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MHDCRPPSRALRRWLKIFDSDPVDGRYGHLLLVENPERDDDLGNQLRPYFESAHGDAREY
CCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHH
FAGEIGISLHPDADEDDDDASLLYPGCLPDTAKRGLFGEVMAGLVTEHYEFVGGHEWKVP
HHCCCCEEECCCCCCCCCCCEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEE
IFLFRYHADVEKYLFDLARDAARERAVFGRFGSDFIGLKLDDDGAVVRLIVGEAKWRAEL
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCHHHCCC
SDSEVETLMLGKWRKNKRTGERKRAGGIWFEINRDLDVPHGVRQLQRLLKERDRDGHAAA
CCCHHHHHHHCCCCCCCCCCCHHHCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEE
IVSMDKALALKNPVPMPRTNLIMIVGNGKATRDEGEPLLVWKTIPEEYTSRHDLQVVEVI
EEEHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCHHHCCCCHHHHHHHH
LKDGEDLIDEIYDLLWTV
HHCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA