| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is malG [C]
Identifier: 86360831
GI number: 86360831
Start: 99590
End: 100354
Strand: Direct
Name: malG [C]
Synonym: RHE_PF00098
Alternate gene names: 86360831
Gene position: 99590-100354 (Clockwise)
Preceding gene: 86360830
Following gene: 86360832
Centisome position: 15.5
GC content: 60.0
Gene sequence:
>765_bases ATGATCTCGCCGGTCGTCCTGTTCTTCCTCTGGATGATCTCGCTGTCGCTGAAATATGAGATCGACAATGGCGCCTATCC GCCGATCTTCATCCCCGAGCGCTTCGCCTGGTCGAACTATGTGAAGGTCTTCGAGGAGAACAATTTCTTTCTCTATCTCT GGAATTCACTGCTGGTGACGGGCGCCGCCACGCTTCTGGCGCTCGTGATCGGCGTGCCGGCCGGATATGGCATCGCGCGC CTGAAGGCGGAGAAGTCGGCGATGATCATCATGATCGCCCGCATGACGCCGGGCCTGTCCTTCCTCATTCCGCTGTTCCT GCTGTTCCAATGGCTGAACCTGCTCGGTACGCTGATGCCGCAGATCATCATCCATCTCGTCGTCACCGTGCCGATCGTCG TATGGATCATGATCGGCTATTTCGAGACGACGCCGATGGAGCTGGAGGAGGCTGCAAGCATCGACGGCGCTACGCCCTGG CAGGTTTTCCGACTGGTTGCCCTGCCGATCGCGAGGCCCGGCATCGTCGTCGCCTTCATCCTGTCGGTGATCTTTTCCTG GAACAATTTCGTCTTCGGCATCGTGCTCGCCAGTCGCGAGACGCGCACGCTTCCCGTCGCCGTCTACAATATGCTGTCTT TCGAACAGGTCAGTTGGGGGCCGCTCGCGGCAGCCGCGCTGATCGTCACCTTGCCGGTGCTGATCTTGACCGTGTTTGCG CAACGGCAGATCGTGGCCGGTCTGACGGCCGGGGCCGTCAAGTGA
Upstream 100 bases:
>100_bases TGATGATGATCCGGCAGCGCGTGAACTGGTCCGACGGGGAGGCACGCTGATGAAGCGCAAGACGCTCGATCGCATCGGAC TGCTGTTCGCTGCGCTGGTG
Downstream 100 bases:
>100_bases GCACGTGAGGCGACCGCCAATGACTTCCTCTGCCATTGGCCCTCCGCCAGTTCCGCCACGCCGCGTGCTCTGCATCGGCG CGGCGGTGCTCGACACCCTG
Product: sugar ABC transporter, permease protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MISPVVLFFLWMISLSLKYEIDNGAYPPIFIPERFAWSNYVKVFEENNFFLYLWNSLLVTGAATLLALVIGVPAGYGIAR LKAEKSAMIIMIARMTPGLSFLIPLFLLFQWLNLLGTLMPQIIIHLVVTVPIVVWIMIGYFETTPMELEEAASIDGATPW QVFRLVALPIARPGIVVAFILSVIFSWNNFVFGIVLASRETRTLPVAVYNMLSFEQVSWGPLAAAALIVTLPVLILTVFA QRQIVAGLTAGAVK
Sequences:
>Translated_254_residues MISPVVLFFLWMISLSLKYEIDNGAYPPIFIPERFAWSNYVKVFEENNFFLYLWNSLLVTGAATLLALVIGVPAGYGIAR LKAEKSAMIIMIARMTPGLSFLIPLFLLFQWLNLLGTLMPQIIIHLVVTVPIVVWIMIGYFETTPMELEEAASIDGATPW QVFRLVALPIARPGIVVAFILSVIFSWNNFVFGIVLASRETRTLPVAVYNMLSFEQVSWGPLAAAALIVTLPVLILTVFA QRQIVAGLTAGAVK >Mature_254_residues MISPVVLFFLWMISLSLKYEIDNGAYPPIFIPERFAWSNYVKVFEENNFFLYLWNSLLVTGAATLLALVIGVPAGYGIAR LKAEKSAMIIMIARMTPGLSFLIPLFLLFQWLNLLGTLMPQIIIHLVVTVPIVVWIMIGYFETTPMELEEAASIDGATPW QVFRLVALPIARPGIVVAFILSVIFSWNNFVFGIVLASRETRTLPVAVYNMLSFEQVSWGPLAAAALIVTLPVLILTVFA QRQIVAGLTAGAVK
Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0395
COG function: function code G; ABC-type sugar transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790464, Length=249, Percent_Identity=34.136546184739, Blast_Score=119, Evalue=3e-28, Organism=Escherichia coli, GI1787571, Length=252, Percent_Identity=31.3492063492063, Blast_Score=117, Evalue=6e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 28180; Mature: 28180
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: PS50928 ABC_TM1 ; PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISPVVLFFLWMISLSLKYEIDNGAYPPIFIPERFAWSNYVKVFEENNFFLYLWNSLLVT CCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHHHEEECCCEEEEEHHHHHHH GAATLLALVIGVPAGYGIARLKAEKSAMIIMIARMTPGLSFLIPLFLLFQWLNLLGTLMP HHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH QIIIHLVVTVPIVVWIMIGYFETTPMELEEAASIDGATPWQVFRLVALPIARPGIVVAFI HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHH LSVIFSWNNFVFGIVLASRETRTLPVAVYNMLSFEQVSWGPLAAAALIVTLPVLILTVFA HHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH QRQIVAGLTAGAVK HHHHHHHHHCCCCC >Mature Secondary Structure MISPVVLFFLWMISLSLKYEIDNGAYPPIFIPERFAWSNYVKVFEENNFFLYLWNSLLVT CCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHHHEEECCCEEEEEHHHHHHH GAATLLALVIGVPAGYGIARLKAEKSAMIIMIARMTPGLSFLIPLFLLFQWLNLLGTLMP HHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH QIIIHLVVTVPIVVWIMIGYFETTPMELEEAASIDGATPWQVFRLVALPIARPGIVVAFI HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHH LSVIFSWNNFVFGIVLASRETRTLPVAVYNMLSFEQVSWGPLAAAALIVTLPVLILTVFA HHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH QRQIVAGLTAGAVK HHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]