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The map label for this gene is ycjP [H]

Identifier: 86360826

GI number: 86360826

Start: 94606

End: 95505

Strand: Direct

Name: ycjP [H]

Synonym: RHE_PF00093

Alternate gene names: 86360826

Gene position: 94606-95505 (Clockwise)

Preceding gene: 86360825

Following gene: 86360827

Centisome position: 14.72

GC content: 60.56

Gene sequence:

>900_bases
ATGTCGACCAATCTCAAAACGGCCGATGAGGGCCTGACCGACAATGCCGAGGGCATGAGCTATCTGAACCGCCTGCCGCG
GCGGGTGGTGATGCTCTACCTGCCGATGGCGGTCTTCGTCTTCGTGCTGCTCTTTCCCTTCTACTGGATGGCGATCACCG
CCGTAAAACCGAACGAGCAGCTGACGGATTACAACAACTACAGCCCCTTCTGGGTGGTCGGCCCGACGCTCGACCACATC
AAATACCTGTTCCTCGAGACGTCCTATCCCGGCTGGCTGTGGAACACGATGCTGGTGGCGGCGGGGTCGACGGCGCTGTC
GCTGGTCGCCTCGGTGTTCGGCGCCTATGCGATCGAGCGCGTGCGCTTCACCGGCGCACGGCAGATCGGCCTCGTCATCT
TTCTCGCCTATCTCATTCCGCCCTCGATCCTCTTCATCCCGCTCGCCTTCATCGTCTTCAAGCTTGGGATCTACGACTCG
CGCCTGGCGCTGATCTTCACCTATCCGACCTTCCTCATTCCCTTCTGCACCTGGCTGCTGATGGGCTATTTCCGCTCGAT
CCCGTTCGAACTGGAGGAGAGCGCGCTGGTCGACGGCGCCAACCGATGGCAGATCCTGGTCAAGATCATCCTGCCGCTTG
CGGTGCCGGGCCTGATCTCCGCCGGCATCTTCGCCTTCACGCTGTCCTGGAACGAATTCATCTACGCGCTGACATTCATC
CAGTCCTCGGAGAACAAGACTATTCCGGTCGGCGTCCTGACCGAACTGGTCCGCGGCGACGTCTTCGAATGGGGATCGCT
GATGGCGGGTGCGCTGTTCGGCTCGCTGCCTGTCGTGATCCTGTATTCCTTCTTCGTCGATTATTACGTGTCCTCGATGA
CGGGCGCGGTGAAGGAGTAG

Upstream 100 bases:

>100_bases
GTCGCCATGATACCCTTCCTGCTCGGCGCCATCATGTTCAGCTTCTTCGGCCTGCAACGCCGCAAATGGCAGCAGGGCGG
CCAGGATTAAGGGGAAAAAG

Downstream 100 bases:

>100_bases
TCTCGTAAATCGGGCCGGCCGCGGAACGTTTGGAAACCTCGGTCGTCGAGAAGAATCTGCTAAAAGGCGCGACCGAACAA
TCACCCCTTTACAACTAACA

Product: sugar ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MSTNLKTADEGLTDNAEGMSYLNRLPRRVVMLYLPMAVFVFVLLFPFYWMAITAVKPNEQLTDYNNYSPFWVVGPTLDHI
KYLFLETSYPGWLWNTMLVAAGSTALSLVASVFGAYAIERVRFTGARQIGLVIFLAYLIPPSILFIPLAFIVFKLGIYDS
RLALIFTYPTFLIPFCTWLLMGYFRSIPFELEESALVDGANRWQILVKIILPLAVPGLISAGIFAFTLSWNEFIYALTFI
QSSENKTIPVGVLTELVRGDVFEWGSLMAGALFGSLPVVILYSFFVDYYVSSMTGAVKE

Sequences:

>Translated_299_residues
MSTNLKTADEGLTDNAEGMSYLNRLPRRVVMLYLPMAVFVFVLLFPFYWMAITAVKPNEQLTDYNNYSPFWVVGPTLDHI
KYLFLETSYPGWLWNTMLVAAGSTALSLVASVFGAYAIERVRFTGARQIGLVIFLAYLIPPSILFIPLAFIVFKLGIYDS
RLALIFTYPTFLIPFCTWLLMGYFRSIPFELEESALVDGANRWQILVKIILPLAVPGLISAGIFAFTLSWNEFIYALTFI
QSSENKTIPVGVLTELVRGDVFEWGSLMAGALFGSLPVVILYSFFVDYYVSSMTGAVKE
>Mature_298_residues
STNLKTADEGLTDNAEGMSYLNRLPRRVVMLYLPMAVFVFVLLFPFYWMAITAVKPNEQLTDYNNYSPFWVVGPTLDHIK
YLFLETSYPGWLWNTMLVAAGSTALSLVASVFGAYAIERVRFTGARQIGLVIFLAYLIPPSILFIPLAFIVFKLGIYDSR
LALIFTYPTFLIPFCTWLLMGYFRSIPFELEESALVDGANRWQILVKIILPLAVPGLISAGIFAFTLSWNEFIYALTFIQ
SSENKTIPVGVLTELVRGDVFEWGSLMAGALFGSLPVVILYSFFVDYYVSSMTGAVKE

Specific function: Probably part of the binding-protein-dependent transport system ycjNOP. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=281, Percent_Identity=35.2313167259786, Blast_Score=153, Evalue=1e-38,
Organism=Escherichia coli, GI1790464, Length=218, Percent_Identity=32.1100917431193, Blast_Score=85, Evalue=7e-18,
Organism=Escherichia coli, GI1789860, Length=266, Percent_Identity=25.187969924812, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1787368, Length=184, Percent_Identity=27.7173913043478, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33640; Mature: 33509

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTNLKTADEGLTDNAEGMSYLNRLPRRVVMLYLPMAVFVFVLLFPFYWMAITAVKPNEQ
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LTDYNNYSPFWVVGPTLDHIKYLFLETSYPGWLWNTMLVAAGSTALSLVASVFGAYAIER
CCCCCCCCCEEEECCCHHHHEEHHEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
VRFTGARQIGLVIFLAYLIPPSILFIPLAFIVFKLGIYDSRLALIFTYPTFLIPFCTWLL
HHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHH
MGYFRSIPFELEESALVDGANRWQILVKIILPLAVPGLISAGIFAFTLSWNEFIYALTFI
HHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHH
QSSENKTIPVGVLTELVRGDVFEWGSLMAGALFGSLPVVILYSFFVDYYVSSMTGAVKE
CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STNLKTADEGLTDNAEGMSYLNRLPRRVVMLYLPMAVFVFVLLFPFYWMAITAVKPNEQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LTDYNNYSPFWVVGPTLDHIKYLFLETSYPGWLWNTMLVAAGSTALSLVASVFGAYAIER
CCCCCCCCCEEEECCCHHHHEEHHEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
VRFTGARQIGLVIFLAYLIPPSILFIPLAFIVFKLGIYDSRLALIFTYPTFLIPFCTWLL
HHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHH
MGYFRSIPFELEESALVDGANRWQILVKIILPLAVPGLISAGIFAFTLSWNEFIYALTFI
HHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHH
QSSENKTIPVGVLTELVRGDVFEWGSLMAGALFGSLPVVILYSFFVDYYVSSMTGAVKE
CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]