| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is 86360819
Identifier: 86360819
GI number: 86360819
Start: 87161
End: 87634
Strand: Direct
Name: 86360819
Synonym: RHE_PF00086
Alternate gene names: NA
Gene position: 87161-87634 (Clockwise)
Preceding gene: 86360814
Following gene: 86360821
Centisome position: 13.57
GC content: 63.71
Gene sequence:
>474_bases ATGCCGGTCCGTAGCGCCGGGCTTCTCATCTACCGCCTTTGCGAGACCGGGCCGGAGGTCCTGCTCGTCCATCCCGGCGG CCCCTTCTGGGCGAAGAAGGACGAGGGCGCCTGGTCGATCCCGAAAGGATTGATCGAAGCCGGCGAAGACGAACTGTCGG CAGCAATCCGGGAGGCGCAGGAAGAGCTCGGCGTCGAAATCAAAGGAAGCTTCGCCCCGCTCGGAGAATATCGCCAACCC GGCGGAAAGGTGGTGGTCGTCTGGTCAGTGGAGGCGGACGCCGCGCTTGATGTCGAGACGGTGCGGAGTTCAGAGTTTCA GATCGAATGGCCGCCGCGATCGGGCCGCATCCAGAATTTCCCCGAGGTCGACCGCGCCGGGTGGTTCCCCGCCGCAGAAG CTGAAATCAAGATTCTCAAAGGCCAGGTTGCAATGCTTGCCGATCTCGCCACACAGCTCGGTCGAGGCCGGTGA
Upstream 100 bases:
>100_bases CATGATATTCTCCGCGCGTCCGTGTGGCTGTCACCTCTAACGCGCCACCGCGCGGAAAGTTGTCATCGAGGAAAGACCAT GATCATTGAGGGAGTTGCCG
Downstream 100 bases:
>100_bases CTGCAAGTCTCTGCCACATTCGGCTTCGACGGGAAGAAGGAGCGCTCAACCGCCTGGAGCTTTTGCGCACACGGAGGCTG CGAATCGCCAACCCGACGCG
Product: putative NTP pyrophosphohydrolase protein
Products: NA
Alternate protein names: MutT-Like Protein; MutT/Nudix Family Protein; Phosphohydrolase; NTP Pyrophosphohydrolase Protein; NUDIX Hydrolase Family Protein; MutT/NUDIX Family Protein; NUDIX Domain-Contain Protein; NTP Pyrophosphohydrolase; MutT Protein; Hydrolase NUDIX Family; MutT-Like Domain-Containing Protein; NUDIX Family Protein
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MPVRSAGLLIYRLCETGPEVLLVHPGGPFWAKKDEGAWSIPKGLIEAGEDELSAAIREAQEELGVEIKGSFAPLGEYRQP GGKVVVVWSVEADAALDVETVRSSEFQIEWPPRSGRIQNFPEVDRAGWFPAAEAEIKILKGQVAMLADLATQLGRGR
Sequences:
>Translated_157_residues MPVRSAGLLIYRLCETGPEVLLVHPGGPFWAKKDEGAWSIPKGLIEAGEDELSAAIREAQEELGVEIKGSFAPLGEYRQP GGKVVVVWSVEADAALDVETVRSSEFQIEWPPRSGRIQNFPEVDRAGWFPAAEAEIKILKGQVAMLADLATQLGRGR >Mature_156_residues PVRSAGLLIYRLCETGPEVLLVHPGGPFWAKKDEGAWSIPKGLIEAGEDELSAAIREAQEELGVEIKGSFAPLGEYRQPG GKVVVVWSVEADAALDVETVRSSEFQIEWPPRSGRIQNFPEVDRAGWFPAAEAEIKILKGQVAMLADLATQLGRGR
Specific function: Unknown
COG id: COG4119
COG function: function code LR; Predicted NTP pyrophosphohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17080; Mature: 16948
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVRSAGLLIYRLCETGPEVLLVHPGGPFWAKKDEGAWSIPKGLIEAGEDELSAAIREAQ CCCCCHHHHEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHH EELGVEIKGSFAPLGEYRQPGGKVVVVWSVEADAALDVETVRSSEFQIEWPPRSGRIQNF HHCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCCCCCCCCC PEVDRAGWFPAAEAEIKILKGQVAMLADLATQLGRGR CCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PVRSAGLLIYRLCETGPEVLLVHPGGPFWAKKDEGAWSIPKGLIEAGEDELSAAIREAQ CCCCHHHHEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHH EELGVEIKGSFAPLGEYRQPGGKVVVVWSVEADAALDVETVRSSEFQIEWPPRSGRIQNF HHCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCCCCCCCCC PEVDRAGWFPAAEAEIKILKGQVAMLADLATQLGRGR CCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA