Definition Rhizobium etli CFN 42 plasmid p42f, complete sequence.
Accession NC_007766
Length 642,517

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The map label for this gene is 86360819

Identifier: 86360819

GI number: 86360819

Start: 87161

End: 87634

Strand: Direct

Name: 86360819

Synonym: RHE_PF00086

Alternate gene names: NA

Gene position: 87161-87634 (Clockwise)

Preceding gene: 86360814

Following gene: 86360821

Centisome position: 13.57

GC content: 63.71

Gene sequence:

>474_bases
ATGCCGGTCCGTAGCGCCGGGCTTCTCATCTACCGCCTTTGCGAGACCGGGCCGGAGGTCCTGCTCGTCCATCCCGGCGG
CCCCTTCTGGGCGAAGAAGGACGAGGGCGCCTGGTCGATCCCGAAAGGATTGATCGAAGCCGGCGAAGACGAACTGTCGG
CAGCAATCCGGGAGGCGCAGGAAGAGCTCGGCGTCGAAATCAAAGGAAGCTTCGCCCCGCTCGGAGAATATCGCCAACCC
GGCGGAAAGGTGGTGGTCGTCTGGTCAGTGGAGGCGGACGCCGCGCTTGATGTCGAGACGGTGCGGAGTTCAGAGTTTCA
GATCGAATGGCCGCCGCGATCGGGCCGCATCCAGAATTTCCCCGAGGTCGACCGCGCCGGGTGGTTCCCCGCCGCAGAAG
CTGAAATCAAGATTCTCAAAGGCCAGGTTGCAATGCTTGCCGATCTCGCCACACAGCTCGGTCGAGGCCGGTGA

Upstream 100 bases:

>100_bases
CATGATATTCTCCGCGCGTCCGTGTGGCTGTCACCTCTAACGCGCCACCGCGCGGAAAGTTGTCATCGAGGAAAGACCAT
GATCATTGAGGGAGTTGCCG

Downstream 100 bases:

>100_bases
CTGCAAGTCTCTGCCACATTCGGCTTCGACGGGAAGAAGGAGCGCTCAACCGCCTGGAGCTTTTGCGCACACGGAGGCTG
CGAATCGCCAACCCGACGCG

Product: putative NTP pyrophosphohydrolase protein

Products: NA

Alternate protein names: MutT-Like Protein; MutT/Nudix Family Protein; Phosphohydrolase; NTP Pyrophosphohydrolase Protein; NUDIX Hydrolase Family Protein; MutT/NUDIX Family Protein; NUDIX Domain-Contain Protein; NTP Pyrophosphohydrolase; MutT Protein; Hydrolase NUDIX Family; MutT-Like Domain-Containing Protein; NUDIX Family Protein

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MPVRSAGLLIYRLCETGPEVLLVHPGGPFWAKKDEGAWSIPKGLIEAGEDELSAAIREAQEELGVEIKGSFAPLGEYRQP
GGKVVVVWSVEADAALDVETVRSSEFQIEWPPRSGRIQNFPEVDRAGWFPAAEAEIKILKGQVAMLADLATQLGRGR

Sequences:

>Translated_157_residues
MPVRSAGLLIYRLCETGPEVLLVHPGGPFWAKKDEGAWSIPKGLIEAGEDELSAAIREAQEELGVEIKGSFAPLGEYRQP
GGKVVVVWSVEADAALDVETVRSSEFQIEWPPRSGRIQNFPEVDRAGWFPAAEAEIKILKGQVAMLADLATQLGRGR
>Mature_156_residues
PVRSAGLLIYRLCETGPEVLLVHPGGPFWAKKDEGAWSIPKGLIEAGEDELSAAIREAQEELGVEIKGSFAPLGEYRQPG
GKVVVVWSVEADAALDVETVRSSEFQIEWPPRSGRIQNFPEVDRAGWFPAAEAEIKILKGQVAMLADLATQLGRGR

Specific function: Unknown

COG id: COG4119

COG function: function code LR; Predicted NTP pyrophosphohydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17080; Mature: 16948

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVRSAGLLIYRLCETGPEVLLVHPGGPFWAKKDEGAWSIPKGLIEAGEDELSAAIREAQ
CCCCCHHHHEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHH
EELGVEIKGSFAPLGEYRQPGGKVVVVWSVEADAALDVETVRSSEFQIEWPPRSGRIQNF
HHCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCCCCCCCCC
PEVDRAGWFPAAEAEIKILKGQVAMLADLATQLGRGR
CCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PVRSAGLLIYRLCETGPEVLLVHPGGPFWAKKDEGAWSIPKGLIEAGEDELSAAIREAQ
CCCCHHHHEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHH
EELGVEIKGSFAPLGEYRQPGGKVVVVWSVEADAALDVETVRSSEFQIEWPPRSGRIQNF
HHCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCCCCCCCCC
PEVDRAGWFPAAEAEIKILKGQVAMLADLATQLGRGR
CCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA