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The map label for this gene is yhhJ [H]

Identifier: 85861001

GI number: 85861001

Start: 3166973

End: 3168094

Strand: Direct

Name: yhhJ [H]

Synonym: SYN_02064

Alternate gene names: 85861001

Gene position: 3166973-3168094 (Clockwise)

Preceding gene: 85861000

Following gene: 85861002

Centisome position: 99.61

GC content: 58.91

Gene sequence:

>1122_bases
ATGCGCGCCGCCAACATTTTCCATCTGGGGATTAAGGAACTGCGCAGCCTGCTGCGCGATCCAGTGATGCTGTTTCTGAT
TATCTACGCTTTTACGTTTGCAATCTATGTCGGCGCCACGGCCATGCCCGAGACGCTGCACAAAGCGCCCATAGCCATCG
TGGACGAGGATCGATCACCGCTTTCTCAGCGTATTGTCGATGCCTTTTACCCGCCGTACTTCATGCTTCCCGTGATGATA
TCGCAGGCGGAGATGGATTCCAGAATGGATGCCGGCCTCGACACTTTTGCCGTCAACATCCCTCCGGAATTCCAGCGTGA
TGTGCTGGCCGGCCGCTCACCGACGATTCAGCTCAATGTGGACGCCACCCGGATGAGCCAGGCCTTCACCGGAAACAGCT
ATATCCAGACCATCATCAGCAGCGAGGTTGCCGGCTTCCTACAGGGTTACCGTTCCAGCCCTGCTCCCACGGTGGATCTG
GCCATGCGGGCCCGCTTCAACCCGGAGTTGAACAAAACATGGTTCGGCGCGGTTATGAAGATCATTGACAATGTCACCAT
GCTCTCCATCATTCTCACCGGGGCCGCGCTGATCCGCGAGCGGGAGCATGGCACCGTGGAGCATCTGCTGGTGATGCCGG
TTACCCCTTTCGAGATCATGACCTCCAAAGTATGGGCCATGGCGCTGGTGGTGCTCATCGCCACGACCTGCTCACTGTTC
TTCATCGTCCAGGGTCTTCTCAAGGTCCCCACCGAAGGTTCCATCGGACTGTTTCTGGCCGGGACGGCGCTGCACCTGTT
TGCCACTACGTCACTGGGAATTTTCCTCGGCACGCTGGCCCGCTCCATGCCTCAGTTCGGCCTGTTGATGATCCTGCTGC
TGATCCCCCTTCAGGTACTCTCAGGGGGCACCACACCCCGGGAAAGCATGCCGGCGTTCGTCCAGTTCGTCATGCTGGCG
GCGCCGAACACCCATTTCGTCATGCTCGCCCAGGCCATTCTGTATCGTGGCGCCGGACTGTCGATTGTCTGGCCGCAATT
TGTCTCCCTGGCCCTGATCGGGGCCACTCTGTTCGGCCTGTCCCTGACCCGCTTCCGCAAAACTCTGGCGACAATGGCAT
GA

Upstream 100 bases:

>100_bases
GGTTCGCTGATCTGAACAATTCGTTTATTCCCCTGCTCCTGGCCGTTCCTCTCCTGGTCGGTCTGGGAACCATTCTGCTC
AAGAAACAGGAATCCTGACC

Downstream 100 bases:

>100_bases
AACTTTTGATGATGCTGATTACAGCTCTGCTGATTGCGGCCTCTGGGCCGTTCCCGTCCTGGGCGGCGGAACCGGCGCGC
AACGGAACGTTCAGCTTTGT

Product: export ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MRAANIFHLGIKELRSLLRDPVMLFLIIYAFTFAIYVGATAMPETLHKAPIAIVDEDRSPLSQRIVDAFYPPYFMLPVMI
SQAEMDSRMDAGLDTFAVNIPPEFQRDVLAGRSPTIQLNVDATRMSQAFTGNSYIQTIISSEVAGFLQGYRSSPAPTVDL
AMRARFNPELNKTWFGAVMKIIDNVTMLSIILTGAALIREREHGTVEHLLVMPVTPFEIMTSKVWAMALVVLIATTCSLF
FIVQGLLKVPTEGSIGLFLAGTALHLFATTSLGIFLGTLARSMPQFGLLMILLLIPLQVLSGGTTPRESMPAFVQFVMLA
APNTHFVMLAQAILYRGAGLSIVWPQFVSLALIGATLFGLSLTRFRKTLATMA

Sequences:

>Translated_373_residues
MRAANIFHLGIKELRSLLRDPVMLFLIIYAFTFAIYVGATAMPETLHKAPIAIVDEDRSPLSQRIVDAFYPPYFMLPVMI
SQAEMDSRMDAGLDTFAVNIPPEFQRDVLAGRSPTIQLNVDATRMSQAFTGNSYIQTIISSEVAGFLQGYRSSPAPTVDL
AMRARFNPELNKTWFGAVMKIIDNVTMLSIILTGAALIREREHGTVEHLLVMPVTPFEIMTSKVWAMALVVLIATTCSLF
FIVQGLLKVPTEGSIGLFLAGTALHLFATTSLGIFLGTLARSMPQFGLLMILLLIPLQVLSGGTTPRESMPAFVQFVMLA
APNTHFVMLAQAILYRGAGLSIVWPQFVSLALIGATLFGLSLTRFRKTLATMA
>Mature_373_residues
MRAANIFHLGIKELRSLLRDPVMLFLIIYAFTFAIYVGATAMPETLHKAPIAIVDEDRSPLSQRIVDAFYPPYFMLPVMI
SQAEMDSRMDAGLDTFAVNIPPEFQRDVLAGRSPTIQLNVDATRMSQAFTGNSYIQTIISSEVAGFLQGYRSSPAPTVDL
AMRARFNPELNKTWFGAVMKIIDNVTMLSIILTGAALIREREHGTVEHLLVMPVTPFEIMTSKVWAMALVVLIATTCSLF
FIVQGLLKVPTEGSIGLFLAGTALHLFATTSLGIFLGTLARSMPQFGLLMILLLIPLQVLSGGTTPRESMPAFVQFVMLA
APNTHFVMLAQAILYRGAGLSIVWPQFVSLALIGATLFGLSLTRFRKTLATMA

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI226510979, Length=369, Percent_Identity=65.3116531165312, Blast_Score=477, Evalue=1e-136,
Organism=Escherichia coli, GI1787010, Length=364, Percent_Identity=27.7472527472527, Blast_Score=125, Evalue=5e-30,
Organism=Escherichia coli, GI48994943, Length=376, Percent_Identity=25.7978723404255, Blast_Score=98, Evalue=7e-22,
Organism=Escherichia coli, GI1787011, Length=348, Percent_Identity=26.1494252873563, Blast_Score=79, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 40896; Mature: 40896

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAANIFHLGIKELRSLLRDPVMLFLIIYAFTFAIYVGATAMPETLHKAPIAIVDEDRSP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEEECCCCH
LSQRIVDAFYPPYFMLPVMISQAEMDSRMDAGLDTFAVNIPPEFQRDVLAGRSPTIQLNV
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCCCEEEEEC
DATRMSQAFTGNSYIQTIISSEVAGFLQGYRSSPAPTVDLAMRARFNPELNKTWFGAVMK
CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHH
IIDNVTMLSIILTGAALIREREHGTVEHLLVMPVTPFEIMTSKVWAMALVVLIATTCSLF
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
FIVQGLLKVPTEGSIGLFLAGTALHLFATTSLGIFLGTLARSMPQFGLLMILLLIPLQVL
HHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
SGGTTPRESMPAFVQFVMLAAPNTHFVMLAQAILYRGAGLSIVWPQFVSLALIGATLFGL
CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHH
SLTRFRKTLATMA
HHHHHHHHHHHCC
>Mature Secondary Structure
MRAANIFHLGIKELRSLLRDPVMLFLIIYAFTFAIYVGATAMPETLHKAPIAIVDEDRSP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEEECCCCH
LSQRIVDAFYPPYFMLPVMISQAEMDSRMDAGLDTFAVNIPPEFQRDVLAGRSPTIQLNV
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCCCEEEEEC
DATRMSQAFTGNSYIQTIISSEVAGFLQGYRSSPAPTVDLAMRARFNPELNKTWFGAVMK
CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHH
IIDNVTMLSIILTGAALIREREHGTVEHLLVMPVTPFEIMTSKVWAMALVVLIATTCSLF
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
FIVQGLLKVPTEGSIGLFLAGTALHLFATTSLGIFLGTLARSMPQFGLLMILLLIPLQVL
HHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
SGGTTPRESMPAFVQFVMLAAPNTHFVMLAQAILYRGAGLSIVWPQFVSLALIGATLFGL
CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHH
SLTRFRKTLATMA
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 8387990 [H]