Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85860949

Identifier: 85860949

GI number: 85860949

Start: 3115711

End: 3115941

Strand: Direct

Name: 85860949

Synonym: SYN_01296

Alternate gene names: NA

Gene position: 3115711-3115941 (Clockwise)

Preceding gene: 85860947

Following gene: 85860950

Centisome position: 98.0

GC content: 52.81

Gene sequence:

>231_bases
ATGTCAACCGAAGCTCCTGAATACGAGGTAGTGCTGTTCCATTCCGTCAGTTACGCCTTGAAAGCGGAAAAAATCCTGAA
AACAAAGGGGATATCCTATAAATTGATCCCTGTGCCCCGCCATATCAGCTCCGACTGCGGCTTCTGCGTTCGCTTTCCTT
CCCATCTCCACCAGGAGGTCGCCGAGGCCCTGAAGGACAGCGTGGACTATGTGGTCATTCGTCCCCTCTGA

Upstream 100 bases:

>100_bases
AATAAACCAGATTTTAATGGTTTGAGAAGGTTTGTTCGAGCTGGATATTTTCATTCGAAATTCTCCATGGCAGGTAAGGT
AATAAGGCGGATGCAAAAAG

Downstream 100 bases:

>100_bases
AGGCTGAGGGTGACGAATAAGTTTCAGAAAAAGAATAAAAAAAAAGTAAAAAAATTGTTTGCATTGGAGTTTTCATCATG
GTATGAGAGCTCATGTTTGT

Product: cytoplasmic protein

Products: NA

Alternate protein names: NifU -Like Protein Involved In Fe-S Cluster Formation

Number of amino acids: Translated: 76; Mature: 75

Protein sequence:

>76_residues
MSTEAPEYEVVLFHSVSYALKAEKILKTKGISYKLIPVPRHISSDCGFCVRFPSHLHQEVAEALKDSVDYVVIRPL

Sequences:

>Translated_76_residues
MSTEAPEYEVVLFHSVSYALKAEKILKTKGISYKLIPVPRHISSDCGFCVRFPSHLHQEVAEALKDSVDYVVIRPL
>Mature_75_residues
STEAPEYEVVLFHSVSYALKAEKILKTKGISYKLIPVPRHISSDCGFCVRFPSHLHQEVAEALKDSVDYVVIRPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8588; Mature: 8457

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTEAPEYEVVLFHSVSYALKAEKILKTKGISYKLIPVPRHISSDCGFCVRFPSHLHQEV
CCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECHHHHHHHH
AEALKDSVDYVVIRPL
HHHHHCCCCEEEEECC
>Mature Secondary Structure 
STEAPEYEVVLFHSVSYALKAEKILKTKGISYKLIPVPRHISSDCGFCVRFPSHLHQEV
CCCCCCEEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECHHHHHHHH
AEALKDSVDYVVIRPL
HHHHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA