Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85860917

Identifier: 85860917

GI number: 85860917

Start: 3087831

End: 3088310

Strand: Direct

Name: 85860917

Synonym: SYN_03077

Alternate gene names: NA

Gene position: 3087831-3088310 (Clockwise)

Preceding gene: 85860916

Following gene: 85860918

Centisome position: 97.12

GC content: 52.92

Gene sequence:

>480_bases
ATGGCAGAACCATTGAAAAACAGGTTCATAAGATACTGGCTTCCCGTCCTTCTCTGGATGGGGATGATCTTCTGGATGTC
CACCGGGACGTTTTCCGCGGAACATACCTCCCGTTTCATCGGTCCGCTCCTGCATTTCCTGTTCCCCCGGCTCTCGTCGC
AGGATATGGATCTGCTGCATGGATGTATTCGGAAGGCCGGTCATGTCGCCGAGTATTTTATCCTGGGGCTTCTTTTCTTT
CGCGCCTTCCGCGGCAACGATCCGCAGGGATGGCGCCTGCGCTGGGCGGTTTGCGCCGTGATCGGGGTGGTGTTCTACGC
GCTGGGCGATGAATTTCATCAGTCATGGATTGCTTCGAGGACTTCTTCTCTTGTAGATGTGGGCATCGATTCAATGGGCG
GCGTTTTTTCACAGATTGTGATGTTCGCCAGAGTAAAAATATCCAGACCTGTTTCCCTCCAATCAATCGGATCAGGATAA

Upstream 100 bases:

>100_bases
CATCTCTTCCCAGTTGTCGCTGCTCTCGGAAACGGAAGACCACATCGAGGCGGCAAAGGCCTTTCTGGAGAAACGGCCTC
CCCTTTTCAAAGGAAAATAG

Downstream 100 bases:

>100_bases
CCCCCGGCAAGGCCTGATTCCGCCGCTGTCTTTTAAGGCCGGCTGAATTTTTTGCAGACATGAACTCATTTTGATTGACA
AGTTCACCGACCGCCCTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: VanZ Family Protein; Acetobutylicum Phosphotransbutyrylase; Phosphotransbutyrylase

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MAEPLKNRFIRYWLPVLLWMGMIFWMSTGTFSAEHTSRFIGPLLHFLFPRLSSQDMDLLHGCIRKAGHVAEYFILGLLFF
RAFRGNDPQGWRLRWAVCAVIGVVFYALGDEFHQSWIASRTSSLVDVGIDSMGGVFSQIVMFARVKISRPVSLQSIGSG

Sequences:

>Translated_159_residues
MAEPLKNRFIRYWLPVLLWMGMIFWMSTGTFSAEHTSRFIGPLLHFLFPRLSSQDMDLLHGCIRKAGHVAEYFILGLLFF
RAFRGNDPQGWRLRWAVCAVIGVVFYALGDEFHQSWIASRTSSLVDVGIDSMGGVFSQIVMFARVKISRPVSLQSIGSG
>Mature_158_residues
AEPLKNRFIRYWLPVLLWMGMIFWMSTGTFSAEHTSRFIGPLLHFLFPRLSSQDMDLLHGCIRKAGHVAEYFILGLLFFR
AFRGNDPQGWRLRWAVCAVIGVVFYALGDEFHQSWIASRTSSLVDVGIDSMGGVFSQIVMFARVKISRPVSLQSIGSG

Specific function: Unknown

COG id: COG5652

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18048; Mature: 17917

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEPLKNRFIRYWLPVLLWMGMIFWMSTGTFSAEHTSRFIGPLLHFLFPRLSSQDMDLLH
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHH
GCIRKAGHVAEYFILGLLFFRAFRGNDPQGWRLRWAVCAVIGVVFYALGDEFHQSWIASR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSSLVDVGIDSMGGVFSQIVMFARVKISRPVSLQSIGSG
HHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCC
>Mature Secondary Structure 
AEPLKNRFIRYWLPVLLWMGMIFWMSTGTFSAEHTSRFIGPLLHFLFPRLSSQDMDLLH
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHH
GCIRKAGHVAEYFILGLLFFRAFRGNDPQGWRLRWAVCAVIGVVFYALGDEFHQSWIASR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSSLVDVGIDSMGGVFSQIVMFARVKISRPVSLQSIGSG
HHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA