| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85860784
Identifier: 85860784
GI number: 85860784
Start: 2954752
End: 2955018
Strand: Direct
Name: 85860784
Synonym: SYN_00336
Alternate gene names: NA
Gene position: 2954752-2955018 (Clockwise)
Preceding gene: 85860783
Following gene: 85860785
Centisome position: 92.94
GC content: 56.93
Gene sequence:
>267_bases GTGAGCGAAAGGAGGACCATTATGGGAGAAAAGATCAGGATCTACGGAACGGAAATGTGTCCCTTCTGCAGAAAGGCACG TGAGGCCTACGGGGAGAAGGCCGTTTTCATCAATGTCGGAGGCGATCCGGAAAAGCTTGCAGAGATGCTCGCCTATTCCG GCGGCAACAGGACCGTGCCTGTCATCGTGGACGGCGATAAGGTGACGGTCGGCTTTCTCGGGGATTCCTCTTCACAGGGG AACGTCCCGCTTTTCGGGGGCGGATGA
Upstream 100 bases:
>100_bases TAATCAGCCATGTGAGCGGATTTGCGTTTTGCAAGTTCACATCCCGATGCAGAGGTAATGAATCAAATTATCTCCTCAGA ATTATAGGAGATTCTTTTTC
Downstream 100 bases:
>100_bases GCGGTCTGAACAGGGCTCTCGGTGAGAGACCCACTATTTTTTATTACGGAGGAAGAAATCATGATAGAAGTCACGGAAAA AGCGGCGCAGATGATCAAGG
Product: glutaredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MSERRTIMGEKIRIYGTEMCPFCRKAREAYGEKAVFINVGGDPEKLAEMLAYSGGNRTVPVIVDGDKVTVGFLGDSSSQG NVPLFGGG
Sequences:
>Translated_88_residues MSERRTIMGEKIRIYGTEMCPFCRKAREAYGEKAVFINVGGDPEKLAEMLAYSGGNRTVPVIVDGDKVTVGFLGDSSSQG NVPLFGGG >Mature_87_residues SERRTIMGEKIRIYGTEMCPFCRKAREAYGEKAVFINVGGDPEKLAEMLAYSGGNRTVPVIVDGDKVTVGFLGDSSSQGN VPLFGGG
Specific function: Unknown
COG id: COG0695
COG function: function code O; Glutaredoxin and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9434; Mature: 9303
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERRTIMGEKIRIYGTEMCPFCRKAREAYGEKAVFINVGGDPEKLAEMLAYSGGNRTVP CCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHCCCCCCEEE VIVDGDKVTVGFLGDSSSQGNVPLFGGG EEECCCEEEEEEECCCCCCCCEEEECCC >Mature Secondary Structure SERRTIMGEKIRIYGTEMCPFCRKAREAYGEKAVFINVGGDPEKLAEMLAYSGGNRTVP CCCCCCCCCEEEEEECCCCHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHCCCCCCEEE VIVDGDKVTVGFLGDSSSQGNVPLFGGG EEECCCEEEEEEECCCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA