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The map label for this gene is ydjY [H]

Identifier: 85860747

GI number: 85860747

Start: 2924929

End: 2925654

Strand: Direct

Name: ydjY [H]

Synonym: SYN_00374

Alternate gene names: 85860747

Gene position: 2924929-2925654 (Clockwise)

Preceding gene: 85860746

Following gene: 85860757

Centisome position: 92.0

GC content: 58.13

Gene sequence:

>726_bases
ATGAGAGAACGGATTTCATCTATCCCCTGTCAGGATTTCTCCCGGCGGGATTTTCTTCGTTCTCTGCTGATCGCCAGTGG
GGCTGTTCTTCTCGGACCGCAGGGTCTCCTGGAGGCAGCCCCCCTCCTTGCCGGAGGAAGGGACTGGCCTGGAGACTGGC
CGACGTCCGGCAACCCCGTCATGGTGGACACGGCAAGGCGAATTGTTAAACTTTACACGAAGCTTCAGCTGCGTCACCTT
ACGGAGACGACTCCCCACTGGGGAATCGGTTATTCCGGGGGAAAGTTAGCCGACAAGTTCATTCTCGTGTCTCCGGCGGG
ACCAGTGGCCTTGCATGACGCCCTGGTCCGGATCAGAGCCAGAGCGGGGAACAATCTTCCCCTTGACGGTTACGGCAAAT
TTGTCGACGGGGATCGCCTGATCCTGTCTGCCCAATGGCCGGGCCTTCCGACACCGGTCGGCCTTAACGAGATCTTTTAT
GATTCGGCGGGGAAGGGGTTCGATATCCGTTTTGGCGGAAACAGGGCCATTGCGGCGGAAAAGAAAACGGGTTGCCTCAC
CTGCCTGGAATCCTGCCCGATCGGCATATCGAGCAATGCCGTCTATCCCCACCTCAGCACGCTGCAGCGGATGCTGCGCC
CCACTTCTTCCTTCCGTGGGAAACCGGAGAGGCTTCCGAACAAAGAGGCCGTTCCGATCGTTGTCTTTTATCAGTTGGCT
CCATAA

Upstream 100 bases:

>100_bases
TCGCCACCCCGGCGGAATCATGGCCTGGGATCAGGCGGGCTATCCTGTGGAAAAAGTCAAATAGGGTAATGTCCTCGAAT
TTTAAGGGAGTTAAAACGAT

Downstream 100 bases:

>100_bases
TCCGTCCCCCCTCGAAGTTCACGAAAATCTACAGAAATACCATACTTTCCCAGTCTGCCGCCCCCTGCAGCATTCCAACC
ACTGTTTCCTGCTGGTCCAT

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MRERISSIPCQDFSRRDFLRSLLIASGAVLLGPQGLLEAAPLLAGGRDWPGDWPTSGNPVMVDTARRIVKLYTKLQLRHL
TETTPHWGIGYSGGKLADKFILVSPAGPVALHDALVRIRARAGNNLPLDGYGKFVDGDRLILSAQWPGLPTPVGLNEIFY
DSAGKGFDIRFGGNRAIAAEKKTGCLTCLESCPIGISSNAVYPHLSTLQRMLRPTSSFRGKPERLPNKEAVPIVVFYQLA
P

Sequences:

>Translated_241_residues
MRERISSIPCQDFSRRDFLRSLLIASGAVLLGPQGLLEAAPLLAGGRDWPGDWPTSGNPVMVDTARRIVKLYTKLQLRHL
TETTPHWGIGYSGGKLADKFILVSPAGPVALHDALVRIRARAGNNLPLDGYGKFVDGDRLILSAQWPGLPTPVGLNEIFY
DSAGKGFDIRFGGNRAIAAEKKTGCLTCLESCPIGISSNAVYPHLSTLQRMLRPTSSFRGKPERLPNKEAVPIVVFYQLA
P
>Mature_241_residues
MRERISSIPCQDFSRRDFLRSLLIASGAVLLGPQGLLEAAPLLAGGRDWPGDWPTSGNPVMVDTARRIVKLYTKLQLRHL
TETTPHWGIGYSGGKLADKFILVSPAGPVALHDALVRIRARAGNNLPLDGYGKFVDGDRLILSAQWPGLPTPVGLNEIFY
DSAGKGFDIRFGGNRAIAAEKKTGCLTCLESCPIGISSNAVYPHLSTLQRMLRPTSSFRGKPERLPNKEAVPIVVFYQLA
P

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI87081965, Length=186, Percent_Identity=34.9462365591398, Blast_Score=114, Evalue=4e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26216; Mature: 26216

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRERISSIPCQDFSRRDFLRSLLIASGAVLLGPQGLLEAAPLLAGGRDWPGDWPTSGNPV
CCCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCE
MVDTARRIVKLYTKLQLRHLTETTPHWGIGYSGGKLADKFILVSPAGPVALHDALVRIRA
EEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHH
RAGNNLPLDGYGKFVDGDRLILSAQWPGLPTPVGLNEIFYDSAGKGFDIRFGGNRAIAAE
HCCCCCCCCCCCCEECCCEEEEEECCCCCCCCCCCHHHHHCCCCCCEEEEECCCEEEECC
KKTGCLTCLESCPIGISSNAVYPHLSTLQRMLRPTSSFRGKPERLPNKEAVPIVVFYQLA
CCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHCCCHHHCCCCCCCEEEEEEEEC
P
C
>Mature Secondary Structure
MRERISSIPCQDFSRRDFLRSLLIASGAVLLGPQGLLEAAPLLAGGRDWPGDWPTSGNPV
CCCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCE
MVDTARRIVKLYTKLQLRHLTETTPHWGIGYSGGKLADKFILVSPAGPVALHDALVRIRA
EEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHH
RAGNNLPLDGYGKFVDGDRLILSAQWPGLPTPVGLNEIFYDSAGKGFDIRFGGNRAIAAE
HCCCCCCCCCCCCEECCCEEEEEECCCCCCCCCCCHHHHHCCCCCCEEEEECCCEEEECC
KKTGCLTCLESCPIGISSNAVYPHLSTLQRMLRPTSSFRGKPERLPNKEAVPIVVFYQLA
CCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHCCCHHHCCCCCCCEEEEEEEEC
P
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]