Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85860733

Identifier: 85860733

GI number: 85860733

Start: 2913962

End: 2915548

Strand: Direct

Name: 85860733

Synonym: SYN_02389

Alternate gene names: NA

Gene position: 2913962-2915548 (Clockwise)

Preceding gene: 85860732

Following gene: 85860739

Centisome position: 91.65

GC content: 56.08

Gene sequence:

>1587_bases
ATGTCTCGAGATCAGCACACCATACAAAAAATGATTCCCCGAATCGGACTTCCCGGCACGGCATTGCGGTACGCCGGACT
GAGGTGGCAATGGGTTGGTACCTTCGCACTGTTGCTCGTCTTGGCACTGGGGCTTCGTCTGCTGGCAATGGCAAACGTGC
CGTTGATTCCCGAGGAGGCGTACTACTGGATGTACGCGCAACACGCTGAACTCAGCTACTTCGATCATCCACCGATGATC
GCCTGGGTGATCGGTCTGGGAACGGCGGTTTTCGGCCATACGGAGTTTGGTGTCCGCATCGTCGGGAACCTGTTGATGCT
TGGCGCGAGTTTGCTGATGTACCGATTCGGACGGGCCTGGTTCAGTCAGGCGGCCGGTGCGGTGGCAGCTTTGCTTCTGC
AAGTCTTGCCGGTGTTTTTCGGTGTCGGGTTTATTGCGACGATGGACGCGGCGTTGGTTTTTTTCTGGATGCTCGGTCTG
GTCGGCGTAACTGCCGCGTTGCGTGACAACCGAGCGTGGGGCTGGTATTTGGCCGGATTCGCCCTCGGTTCGGCCATGCT
CAGTAAGTATACTGGCTTGTTCCTGGCTGTGGGGACAGGACTGGCGGTTGTTGCACATCGACCATGGCGGCGGCATCTGC
AAACCATCCACCCATACCTATCGATCCTGTTCGCGGTGGCCCTTTTCAGCCCGGTCATCATCTGGAATGCACAGCACGAC
TGGGCCAGTTTCCGTTTCCAGTTCCTGGATCGCTTCACCGCTGAGCCGATTAGAGTTAGCACGATGCTGACGTTCATAGG
ATTTCAACTCCTGATCGCAACACCGATCATTTTCTGGGTTTACGGTCGACTCACTGTCCAACTGCTTCACAAACCGCTGC
AGGCGTTGCCCCCGCAATCTACCCTCACGTTTGCATTCAGCTTGCCCCTGTTTTCGATAATGGCATATAAGTCGCTCCGG
TATGGCGTCCACATCAACTGGACGCTCCCCGCATTTCTCAGTCTTTTGCCCGCCGTATCGCAATGGTTTATTGATCATGG
ACTTGCCGACTTCAAACGCCGGCTGTGGACACGCGGATTTGCGTGGACGATCATACTCTGCGTTCTTTTCAATATCAGTT
CGGCCGCATACCTGCTGATCCTCCAGCCACGCGTGCAATGGATCTCGGCATTCGGGCCGTGGAAGCAGTTAGCCTCTATC
GTCGAGCAGTACGAAGATCAACTTGAGTCAGAGACCGGGCGTGAGCCCCTGATCATCGCGGAGGGCGCGTACCGCCTGGC
CAGTGTCCTGGCCTTTTACCGCAGGCCAGTAGAACACCACGTGAACACAGCCTGCTACACAACCAGCCAGTGGGTTCTCG
GAGGGAACGGCCTGGGTTATCCCTACTGGAGCGACCGTAATCGCTGGCAAGGGAGTGTCGCCATCTTTATCGACGACGAC
GAAGGCGCTCTCGCAAGAACGCGGGATCACTTCGATGAAGTCCGGCTGGTAACAGACGCGCGTCTGCTTGAACTCGGACG
GCATAAATACCAGCTCGTTATGGGCAAAAACCTGAAGTTAGGCAATGATTCGGTTTCCAGTAAATAA

Upstream 100 bases:

>100_bases
TATGGATGGCCTGCCTGTCTTCAAGAAACTGGTCCAGGAAAATTTTACACAAAATAGTTGACACTACCTCTTTAACATTT
CTGCATATGCGGATGGATAA

Downstream 100 bases:

>100_bases
TGATCGAGACGATGCAGAATGCCGTTTCAAACGTTGGCTGTCCTTTTTTCATCCCCAACCTTAATCTCCTCGCAAAATCG
ACTCTGTATCAACGGCTGAA

Product: dolichyl-phosphate-mannose--protein mannosyltransferase

Products: NA

Alternate protein names: Glycosyl Transferase Family Protein; Dolichyl-Phosphate-Mannose-Protein Mannosyltransferase; Glycosyl Transferase; Glycosyltransferase; 4-Amino-4-Deoxy-L-Arabinose Transferase; Dolichyl-Phosphate Beta-D-Mannosyltransferase; Glycosyltransferase Family; Undecaprenyl-PhosphomannoseProtein Mannosyltransferase; Dolichol Monophosphate Mannose Synthase; Family; Glycosyl/Arabinosyl/Mannosyl Transferase; Dolichyl-Phosphate Mannosyltransferase

Number of amino acids: Translated: 528; Mature: 527

Protein sequence:

>528_residues
MSRDQHTIQKMIPRIGLPGTALRYAGLRWQWVGTFALLLVLALGLRLLAMANVPLIPEEAYYWMYAQHAELSYFDHPPMI
AWVIGLGTAVFGHTEFGVRIVGNLLMLGASLLMYRFGRAWFSQAAGAVAALLLQVLPVFFGVGFIATMDAALVFFWMLGL
VGVTAALRDNRAWGWYLAGFALGSAMLSKYTGLFLAVGTGLAVVAHRPWRRHLQTIHPYLSILFAVALFSPVIIWNAQHD
WASFRFQFLDRFTAEPIRVSTMLTFIGFQLLIATPIIFWVYGRLTVQLLHKPLQALPPQSTLTFAFSLPLFSIMAYKSLR
YGVHINWTLPAFLSLLPAVSQWFIDHGLADFKRRLWTRGFAWTIILCVLFNISSAAYLLILQPRVQWISAFGPWKQLASI
VEQYEDQLESETGREPLIIAEGAYRLASVLAFYRRPVEHHVNTACYTTSQWVLGGNGLGYPYWSDRNRWQGSVAIFIDDD
EGALARTRDHFDEVRLVTDARLLELGRHKYQLVMGKNLKLGNDSVSSK

Sequences:

>Translated_528_residues
MSRDQHTIQKMIPRIGLPGTALRYAGLRWQWVGTFALLLVLALGLRLLAMANVPLIPEEAYYWMYAQHAELSYFDHPPMI
AWVIGLGTAVFGHTEFGVRIVGNLLMLGASLLMYRFGRAWFSQAAGAVAALLLQVLPVFFGVGFIATMDAALVFFWMLGL
VGVTAALRDNRAWGWYLAGFALGSAMLSKYTGLFLAVGTGLAVVAHRPWRRHLQTIHPYLSILFAVALFSPVIIWNAQHD
WASFRFQFLDRFTAEPIRVSTMLTFIGFQLLIATPIIFWVYGRLTVQLLHKPLQALPPQSTLTFAFSLPLFSIMAYKSLR
YGVHINWTLPAFLSLLPAVSQWFIDHGLADFKRRLWTRGFAWTIILCVLFNISSAAYLLILQPRVQWISAFGPWKQLASI
VEQYEDQLESETGREPLIIAEGAYRLASVLAFYRRPVEHHVNTACYTTSQWVLGGNGLGYPYWSDRNRWQGSVAIFIDDD
EGALARTRDHFDEVRLVTDARLLELGRHKYQLVMGKNLKLGNDSVSSK
>Mature_527_residues
SRDQHTIQKMIPRIGLPGTALRYAGLRWQWVGTFALLLVLALGLRLLAMANVPLIPEEAYYWMYAQHAELSYFDHPPMIA
WVIGLGTAVFGHTEFGVRIVGNLLMLGASLLMYRFGRAWFSQAAGAVAALLLQVLPVFFGVGFIATMDAALVFFWMLGLV
GVTAALRDNRAWGWYLAGFALGSAMLSKYTGLFLAVGTGLAVVAHRPWRRHLQTIHPYLSILFAVALFSPVIIWNAQHDW
ASFRFQFLDRFTAEPIRVSTMLTFIGFQLLIATPIIFWVYGRLTVQLLHKPLQALPPQSTLTFAFSLPLFSIMAYKSLRY
GVHINWTLPAFLSLLPAVSQWFIDHGLADFKRRLWTRGFAWTIILCVLFNISSAAYLLILQPRVQWISAFGPWKQLASIV
EQYEDQLESETGREPLIIAEGAYRLASVLAFYRRPVEHHVNTACYTTSQWVLGGNGLGYPYWSDRNRWQGSVAIFIDDDE
GALARTRDHFDEVRLVTDARLLELGRHKYQLVMGKNLKLGNDSVSSK

Specific function: Unknown

COG id: COG1807

COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59696; Mature: 59564

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRDQHTIQKMIPRIGLPGTALRYAGLRWQWVGTFALLLVLALGLRLLAMANVPLIPEEA
CCCHHHHHHHHHHCCCCCCHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
YYWMYAQHAELSYFDHPPMIAWVIGLGTAVFGHTEFGVRIVGNLLMLGASLLMYRFGRAW
EEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FSQAAGAVAALLLQVLPVFFGVGFIATMDAALVFFWMLGLVGVTAALRDNRAWGWYLAGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
ALGSAMLSKYTGLFLAVGTGLAVVAHRPWRRHLQTIHPYLSILFAVALFSPVIIWNAQHD
HHHHHHHHHHHHHHHHHCCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCH
WASFRFQFLDRFTAEPIRVSTMLTFIGFQLLIATPIIFWVYGRLTVQLLHKPLQALPPQS
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TLTFAFSLPLFSIMAYKSLRYGVHINWTLPAFLSLLPAVSQWFIDHGLADFKRRLWTRGF
HHHEEHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCH
AWTIILCVLFNISSAAYLLILQPRVQWISAFGPWKQLASIVEQYEDQLESETGREPLIIA
HHHHHHHHHHCCCCCEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEE
EGAYRLASVLAFYRRPVEHHVNTACYTTSQWVLGGNGLGYPYWSDRNRWQGSVAIFIDDD
CCHHHHHHHHHHHHCCHHHHCCHHEEECCCEEECCCCCCCCCCCCCCCCCCEEEEEEECC
EGALARTRDHFDEVRLVTDARLLELGRHKYQLVMGKNLKLGNDSVSSK
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
SRDQHTIQKMIPRIGLPGTALRYAGLRWQWVGTFALLLVLALGLRLLAMANVPLIPEEA
CCHHHHHHHHHHCCCCCCHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC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CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA