| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85860688
Identifier: 85860688
GI number: 85860688
Start: 2866124
End: 2866768
Strand: Direct
Name: 85860688
Synonym: SYN_02435
Alternate gene names: NA
Gene position: 2866124-2866768 (Clockwise)
Preceding gene: 85860687
Following gene: 85860690
Centisome position: 90.15
GC content: 40.16
Gene sequence:
>645_bases GTGGCTAAGGAATGGATTCTAAACAGTGCGATGAACCGTTTCCAATTGAATTTCAAGAGAAATGTCGGCCCTACCTCGGA AAGCATCAGGCAGTGTGCGCCTGCAACATATAATGAATGGCGAGATTATTACTTTAGTAACGTCCGCACAAAAGAGCATA TAGAAGACCTTGGCAAGAAACTCTACGTTAAAATCACCGAAGTCATTAGCGCTGAGGTGGAGGACGTTACCGAGCAAGAC TGCATTGATTATATGTTGCAGATGGTCATAGACCGTTCATTTGATGGTTATATTACCGAGATCAAAACTGTTTACGGGCA ATTGGAAAAAGAGCTTATGGTAAAAATCGAACCAGCACCAGATGAATGGGACAGGCTTTTCAATGTGGATTTTTTCATCA AAATTCAAGATAAGTACATAGGCATACAGATAAAACCGGTCAATCAGGGGATACAGTTATCGCAAATCTTCAAGGAAAAA GACTTGCAAGCCAAAACTCATGAAGCATTTACTAAGCAATATGGTGGAAGGGTTTTCTATGTTTATTCATCCAAGGTTGG GGAACGAAAAGAAATACGCAACAAAGAAGTCATCATTGAAATAAGACAAGAAATTGAACGTCTCAAGACTGACATGACCC GCTAA
Upstream 100 bases:
>100_bases ACATTTCTCAATGCACACCTGATCAAAGAAGGTTTGGCAATAGTTGACCGCTCTGTTGATTTTCGATACAAAGACAAATT CATGAAACTGGAGGCACAGT
Downstream 100 bases:
>100_bases TCGGGTAAGGAGGAGTATTTCTCTCCCCTCTCCCCACACCACCTGGCATTCGGGTCCGCACCGGAGTGTTCACTGAATAT GACAGCTATTCTCGATTTCA
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MAKEWILNSAMNRFQLNFKRNVGPTSESIRQCAPATYNEWRDYYFSNVRTKEHIEDLGKKLYVKITEVISAEVEDVTEQD CIDYMLQMVIDRSFDGYITEIKTVYGQLEKELMVKIEPAPDEWDRLFNVDFFIKIQDKYIGIQIKPVNQGIQLSQIFKEK DLQAKTHEAFTKQYGGRVFYVYSSKVGERKEIRNKEVIIEIRQEIERLKTDMTR
Sequences:
>Translated_214_residues MAKEWILNSAMNRFQLNFKRNVGPTSESIRQCAPATYNEWRDYYFSNVRTKEHIEDLGKKLYVKITEVISAEVEDVTEQD CIDYMLQMVIDRSFDGYITEIKTVYGQLEKELMVKIEPAPDEWDRLFNVDFFIKIQDKYIGIQIKPVNQGIQLSQIFKEK DLQAKTHEAFTKQYGGRVFYVYSSKVGERKEIRNKEVIIEIRQEIERLKTDMTR >Mature_213_residues AKEWILNSAMNRFQLNFKRNVGPTSESIRQCAPATYNEWRDYYFSNVRTKEHIEDLGKKLYVKITEVISAEVEDVTEQDC IDYMLQMVIDRSFDGYITEIKTVYGQLEKELMVKIEPAPDEWDRLFNVDFFIKIQDKYIGIQIKPVNQGIQLSQIFKEKD LQAKTHEAFTKQYGGRVFYVYSSKVGERKEIRNKEVIIEIRQEIERLKTDMTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25419; Mature: 25288
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKEWILNSAMNRFQLNFKRNVGPTSESIRQCAPATYNEWRDYYFSNVRTKEHIEDLGKK CCHHHHHHHHHHHHEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHH LYVKITEVISAEVEDVTEQDCIDYMLQMVIDRSFDGYITEIKTVYGQLEKELMVKIEPAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEECCCC DEWDRLFNVDFFIKIQDKYIGIQIKPVNQGIQLSQIFKEKDLQAKTHEAFTKQYGGRVFY CHHHHHCCCEEEEEEECEEEEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHCCEEEE VYSSKVGERKEIRNKEVIIEIRQEIERLKTDMTR EECCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AKEWILNSAMNRFQLNFKRNVGPTSESIRQCAPATYNEWRDYYFSNVRTKEHIEDLGKK CHHHHHHHHHHHHEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHH LYVKITEVISAEVEDVTEQDCIDYMLQMVIDRSFDGYITEIKTVYGQLEKELMVKIEPAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEECCCC DEWDRLFNVDFFIKIQDKYIGIQIKPVNQGIQLSQIFKEKDLQAKTHEAFTKQYGGRVFY CHHHHHCCCEEEEEEECEEEEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHCCEEEE VYSSKVGERKEIRNKEVIIEIRQEIERLKTDMTR EECCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA