Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85860554

Identifier: 85860554

GI number: 85860554

Start: 2729329

End: 2730165

Strand: Direct

Name: 85860554

Synonym: SYN_00301

Alternate gene names: NA

Gene position: 2729329-2730165 (Clockwise)

Preceding gene: 85860553

Following gene: 85860556

Centisome position: 85.85

GC content: 56.27

Gene sequence:

>837_bases
ATGAAACCGGACAAGCTGATCATCCTTGACTACTCGGGCACACTCAGTCTTCAGGCCGTACTGTTCGGCCGTCAGGAATC
TCTGCAGGCTGCGCTGGAACAAAGCGGGCTTTCCCGTCTGGGCGTAACGCCTTCCCTTTTCTGGAACGAAATCGTCAATC
CGACCTGGAGAGAAGGCAGCACGACCCGGGTGGGCTACAAACGGGTCATGATAAAGCGCCTCAGGAAAAGGGCCGCGTTC
CGACACCCGGGAGCGACGCCGTTGACCGGGGCCGGTCTGGAAAAGGCGGTGGCGGATTTTGTGGATGCCTATCTGGCCGC
CTCCCGCATGGAAAAATCCTGGCGCTCCATCCTGCGGATTCTCGCCGATCGACGGGATGTCTGTACGATCATTGCCACGG
ATCATTATGCGGAAGCCACCCCGGCCATCCTGAATTTTCTGGCGGAATGGAACATCCCGGCCCTTCCTGCTGAAAAGGCC
TTCAGCTCCCGACGGCCGGCGGTGATCATCGTGGCCAATTCCGCCGATCTGGGGATGCACAAAACCACTCCCTACTTCTG
GCTTACCTTGAAGTCAGGGCTTGAACTTCAGAATTTACGGGAGATTCTGCTTCTGGATGATTTCGGATACAACGAGCAGG
CGGGCGACGCCTACGGTGAGAAAACATGCGTTGAAATACGGCAGGAGCAGACGTCCCGACTGCTCAGAGACGTGTTTTCC
GCCAAGCTTGACGTTTTCCCCTTTTTCCTGGACAGGCGGAACAATCCTGAGGCTTACGAACGCCTTATGATTCAGGTCGG
CCTCTGTATCGATCGCTTTCTGGGTAAAAAAATCTGA

Upstream 100 bases:

>100_bases
ATATCCAGGCGGAAATATCATGGGCACTGAAGAAGAAACAGAGAAACAAGCAGCATCTCATCCACCCTTAGATAACACTA
TCCCGCAGGTTCCGTAATCC

Downstream 100 bases:

>100_bases
CGATGGGTTTTTTAAAAAATCCAGAGCAACCCGGAAGGTTCCTCGTAGAAATTCATGTACGCCAGAAAACCGGATGCGAG
CACAGATGGCGCCATCATTG

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MKPDKLIILDYSGTLSLQAVLFGRQESLQAALEQSGLSRLGVTPSLFWNEIVNPTWREGSTTRVGYKRVMIKRLRKRAAF
RHPGATPLTGAGLEKAVADFVDAYLAASRMEKSWRSILRILADRRDVCTIIATDHYAEATPAILNFLAEWNIPALPAEKA
FSSRRPAVIIVANSADLGMHKTTPYFWLTLKSGLELQNLREILLLDDFGYNEQAGDAYGEKTCVEIRQEQTSRLLRDVFS
AKLDVFPFFLDRRNNPEAYERLMIQVGLCIDRFLGKKI

Sequences:

>Translated_278_residues
MKPDKLIILDYSGTLSLQAVLFGRQESLQAALEQSGLSRLGVTPSLFWNEIVNPTWREGSTTRVGYKRVMIKRLRKRAAF
RHPGATPLTGAGLEKAVADFVDAYLAASRMEKSWRSILRILADRRDVCTIIATDHYAEATPAILNFLAEWNIPALPAEKA
FSSRRPAVIIVANSADLGMHKTTPYFWLTLKSGLELQNLREILLLDDFGYNEQAGDAYGEKTCVEIRQEQTSRLLRDVFS
AKLDVFPFFLDRRNNPEAYERLMIQVGLCIDRFLGKKI
>Mature_278_residues
MKPDKLIILDYSGTLSLQAVLFGRQESLQAALEQSGLSRLGVTPSLFWNEIVNPTWREGSTTRVGYKRVMIKRLRKRAAF
RHPGATPLTGAGLEKAVADFVDAYLAASRMEKSWRSILRILADRRDVCTIIATDHYAEATPAILNFLAEWNIPALPAEKA
FSSRRPAVIIVANSADLGMHKTTPYFWLTLKSGLELQNLREILLLDDFGYNEQAGDAYGEKTCVEIRQEQTSRLLRDVFS
AKLDVFPFFLDRRNNPEAYERLMIQVGLCIDRFLGKKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31440; Mature: 31440

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPDKLIILDYSGTLSLQAVLFGRQESLQAALEQSGLSRLGVTPSLFWNEIVNPTWREGS
CCCCCEEEEECCCCEEEEHHHHCCHHHHHHHHHHCCHHHCCCCHHHHHHHHCCCCCCCCC
TTRVGYKRVMIKRLRKRAAFRHPGATPLTGAGLEKAVADFVDAYLAASRMEKSWRSILRI
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LADRRDVCTIIATDHYAEATPAILNFLAEWNIPALPAEKAFSSRRPAVIIVANSADLGMH
HHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEECCCCCCCC
KTTPYFWLTLKSGLELQNLREILLLDDFGYNEQAGDAYGEKTCVEIRQEQTSRLLRDVFS
CCCCEEEEEECCCCCHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AKLDVFPFFLDRRNNPEAYERLMIQVGLCIDRFLGKKI
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKPDKLIILDYSGTLSLQAVLFGRQESLQAALEQSGLSRLGVTPSLFWNEIVNPTWREGS
CCCCCEEEEECCCCEEEEHHHHCCHHHHHHHHHHCCHHHCCCCHHHHHHHHCCCCCCCCC
TTRVGYKRVMIKRLRKRAAFRHPGATPLTGAGLEKAVADFVDAYLAASRMEKSWRSILRI
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LADRRDVCTIIATDHYAEATPAILNFLAEWNIPALPAEKAFSSRRPAVIIVANSADLGMH
HHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEECCCCCCCC
KTTPYFWLTLKSGLELQNLREILLLDDFGYNEQAGDAYGEKTCVEIRQEQTSRLLRDVFS
CCCCEEEEEECCCCCHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AKLDVFPFFLDRRNNPEAYERLMIQVGLCIDRFLGKKI
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA