Click here to switch to the map view.

The map label for this gene is 85860549

Identifier: 85860549

GI number: 85860549

Start: 2726487

End: 2726759

Strand: Direct

Name: 85860549

Synonym: SYN_03787

Alternate gene names: NA

Gene position: 2726487-2726759 (Clockwise)

Preceding gene: 85860548

Following gene: 85860550

Centisome position: 85.76

GC content: 57.14

Gene sequence:

>273_bases
GTGGATTTCGAGCTTCCCGACCTGGAAAAACGTCCCTTTCGTCTCAGTCAACACCGGGGCAAACCCGTGCTGCTGATCTT
CAGCACGACCTGGTGCGCCTATTGCCGTTCCGAACTGCCCCGTTTCCGGGACATTCATGAACGCTACGCTTCCGGCGGGC
CTGGTGGTCGTTCAGATCTTCATTCAGGAATCCCAACGGAAAGTCTCATCCTTTGCCCGCCAGAACAATCTCCCCTATCG
CGTCCTGCTGGACGAAAAGGGCGAGGTCTCTGA

Upstream 100 bases:

>100_bases
CTTTTGATTTTCTGTCTGGAAGGCTGTACGGAACCTGCCGATCAAAAAGAAGACGGACCCCTCAGCGGCAGTCCGTCCCA
GTTCGAGGTCACGGAAGCGG

Downstream 100 bases:

>100_bases
AGCCTATGGAATTCGGGGCGTTCCCGACATGATTCTCCTTGACCGCAACGGCAAACTGGTTTGCCGGCACTGCCCGGACC
TCGATGCCACCCTGGGAACC

Product: thioredoxin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MDFELPDLEKRPFRLSQHRGKPVLLIFSTTWCAYCRSELPRFRDIHERYASGGPGGRSDLHSGIPTESLILCPPEQSPLS
RPAGRKGRGL

Sequences:

>Translated_90_residues
MDFELPDLEKRPFRLSQHRGKPVLLIFSTTWCAYCRSELPRFRDIHERYASGGPGGRSDLHSGIPTESLILCPPEQSPLS
RPAGRKGRGL
>Mature_90_residues
MDFELPDLEKRPFRLSQHRGKPVLLIFSTTWCAYCRSELPRFRDIHERYASGGPGGRSDLHSGIPTESLILCPPEQSPLS
RPAGRKGRGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10147; Mature: 10147

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: PS00194 THIOREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFELPDLEKRPFRLSQHRGKPVLLIFSTTWCAYCRSELPRFRDIHERYASGGPGGRSDL
CCCCCCCCCCCCCCCHHCCCCEEEEEECCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCC
HSGIPTESLILCPPEQSPLSRPAGRKGRGL
CCCCCCCCEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDFELPDLEKRPFRLSQHRGKPVLLIFSTTWCAYCRSELPRFRDIHERYASGGPGGRSDL
CCCCCCCCCCCCCCCHHCCCCEEEEEECCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCC
HSGIPTESLILCPPEQSPLSRPAGRKGRGL
CCCCCCCCEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA