| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85860545
Identifier: 85860545
GI number: 85860545
Start: 2724552
End: 2725049
Strand: Direct
Name: 85860545
Synonym: SYN_03785
Alternate gene names: NA
Gene position: 2724552-2725049 (Clockwise)
Preceding gene: 85860544
Following gene: 85860546
Centisome position: 85.7
GC content: 64.66
Gene sequence:
>498_bases TTGACGGCATCCTGGCCCTGGAAGGCGAAGGACCGGGGAAACGGGGAACGCCGAAAGGAGGTTGGCCTGCTCCTCGGCAG CGACAACGCCCTGGCCCTCGACAGGACCGTTTGCCGGATACTTGATCTGGAACCGGATCACGTGCCCACGCTGAGAGCCG CCCGCGAACTGGAACTGCTGGACGATTCTTTCACCATCGACGGTCCCCTGGACCCCGTCCGTCCGTTCCGCCTGCCTCAA TCAGCGCCTTCTCTGCTTTACGGCCCCCAGAGCCTGCAACGCCTCATCCGCCTTCATTTCCTGCCCCAGACCCCGTCGTC GATGCCGATCTCTGCCGACAGTGCGGGGCCTGCTGGACAATCTGCCCGGCCAGGGCCATCGACGAATCCGCCCGGCCTCT TGAATTCGACTATGACCGGTGCATCCGCTGCTGCTGCTGCATCGAGGTTTGTCCCTACGGCGCGCTGCATACGGTGGATC CGCTGCCGGGCCGCATGA
Upstream 100 bases:
>100_bases CGCAAACCGGAGTGGCACATGAAGACGGGCGTCAATCGCCCGTTGTTCGCTCGGCTGCTGGTACAGCTTTATCATAGAAT CTCGCCGGCCTTCACGATCC
Downstream 100 bases:
>100_bases TTCGGAAACTCATAGCACGCTTTTCATGACGGAAAAAAGACCTGCCGGCGAAAACCGCGTCAACGAAAATCCGTCAGCTT CCCTTGACCGGAAGACCGCT
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MTASWPWKAKDRGNGERRKEVGLLLGSDNALALDRTVCRILDLEPDHVPTLRAARELELLDDSFTIDGPLDPVRPFRLPQ SAPSLLYGPQSLQRLIRLHFLPQTPSSMPISADSAGPAGQSARPGPSTNPPGLLNSTMTGASAAAAASRFVPTARCIRWI RCRAA
Sequences:
>Translated_165_residues MTASWPWKAKDRGNGERRKEVGLLLGSDNALALDRTVCRILDLEPDHVPTLRAARELELLDDSFTIDGPLDPVRPFRLPQ SAPSLLYGPQSLQRLIRLHFLPQTPSSMPISADSAGPAGQSARPGPSTNPPGLLNSTMTGASAAAAASRFVPTARCIRWI RCRAA >Mature_164_residues TASWPWKAKDRGNGERRKEVGLLLGSDNALALDRTVCRILDLEPDHVPTLRAARELELLDDSFTIDGPLDPVRPFRLPQS APSLLYGPQSLQRLIRLHFLPQTPSSMPISADSAGPAGQSARPGPSTNPPGLLNSTMTGASAAAAASRFVPTARCIRWIR CRAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17804; Mature: 17672
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASWPWKAKDRGNGERRKEVGLLLGSDNALALDRTVCRILDLEPDHVPTLRAARELELL CCCCCCCCCCCCCCCCCHHHEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH DDSFTIDGPLDPVRPFRLPQSAPSLLYGPQSLQRLIRLHFLPQTPSSMPISADSAGPAGQ CCCEECCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC SARPGPSTNPPGLLNSTMTGASAAAAASRFVPTARCIRWIRCRAA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCC >Mature Secondary Structure TASWPWKAKDRGNGERRKEVGLLLGSDNALALDRTVCRILDLEPDHVPTLRAARELELL CCCCCCCCCCCCCCCCHHHEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH DDSFTIDGPLDPVRPFRLPQSAPSLLYGPQSLQRLIRLHFLPQTPSSMPISADSAGPAGQ CCCEECCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC SARPGPSTNPPGLLNSTMTGASAAAAASRFVPTARCIRWIRCRAA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA