| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is zraS [H]
Identifier: 85860539
GI number: 85860539
Start: 2718597
End: 2720108
Strand: Direct
Name: zraS [H]
Synonym: SYN_01808
Alternate gene names: 85860539
Gene position: 2718597-2720108 (Clockwise)
Preceding gene: 85860538
Following gene: 85860543
Centisome position: 85.51
GC content: 54.17
Gene sequence:
>1512_bases ATGACACTGAAAACACGACTGATGATCATCACTCTGTTCGGCCTGGCCATCACCATGGCGCTGTGGGGCTGGATTCAGCT CAGTGTTCTGGACAGAATTCTGCGGGAACAGCAATATAAAAGACTCGATAACATCGCGGAGACCTTGAGCGCCTTCTATC AGCGTTTCCCCTCCGCCCGCGGCCTGTCCGCGCTGGACACCGCGCTGAAAGATCATATCCAGACGGATGTCCGCCTGGCC CGCATCGATATCATTTCCCTGTCCGGAGACGACGTTGATTATATTGCCGGAGCCGGACGCGTACCCTACGAATGGCCGGA GAATCTGATTATCCGGACAGACGGAAAAATGGAGAAGCACCATTATGCCCTGCAGACGGAAGCCGGTTCGGCGATTGGTC TTCTTTATCCTGTTCATCCCGAAAAAGGCTCATCGGCAAAAACCATGATCGGCGTCATTCTTTTTTCCCAATCCGATATG GAGATTTTGAGCCGGGCCCGGTGGATGCTTTTCTTCAGCACGCTGGGGCTTCTCGTCATTATCCTGCTCGTGATGGCCGT CGGCTACGATTTTCTCATCGGCAGGCCTCTCCGACGGATTATCGAAACGATCGATCACTTTCGTACGGGAAAGCAGGCCA GCCGTATTCCCATTGACCGTTCCGATGAATGGGGACAGCTGGCTGATCATTTCAACGTAATGGCCGGAGAGATAGAAAAT TTCATAGCCCAGAACCAGGAATTGAACAGGGGATTGGAACTCCGGGTCAAGGAAGCCACTCTCAAGGTGGTTCAGCTGCA GAGACAGGTCAATCAACTTCAGCAGTTGAAAGCCCTGGGATATCTGACGGCCACACTGGCCCATGATTTAGGCACGCCTT TGCATTCCATCGCCGGCATGACCCAACTCCTCCTGGAACGGGACGAATGGCCGCCTGATACCGCCCGCAAACTGGAATTG ATCCTGCAGCAAACTCAAAGGCTCAACACGGTGATTCAGAATGTCCGCCGCGCAACCCGTCTGCCGGAGCCTCATTTCGA ATCGATCCCGGTACAGAGACTGCTCGACGATACCCTGCCGCTTGTTGAACCGGTCATTCAGAAATCGAAAGTGGAACTCC TTGTCCAGATCGCCCCGGACACGCCCCCGTTATATGTAGATAACTACCGTGTTCAGACAGCCCTGTTCAATCTCATCCAG AATGCCCTGGAAGCCATGCCGCATGGGGGGAAAATTTTTGTTTCCGCCCGGGTTTCCAATGACCGCCAGGCGATCGCCGT AACCGTTCAGGACACCGGTCCAGGCATCCCTCCATCCATGATGGGAAAGATATGTGAACCCTTCTTCAGCACCCATCCGG GCGAAGGCATCCGCGGCCTGGGACTGGCTATCGTCCAGGACATTGTCAAGGCCCATGCCGGTTCAATTGATATTCAAAGT CAGCCTCACAAGGGAACATGCATTACGCTCTTTTTCCCGATCGCTTGCAGGCTGCAGGAAATCCCCGGGTAA
Upstream 100 bases:
>100_bases TCTTTTTTTTCATGAAAATCATTTTTGTTTCCTGTAGAGAAAGGATCGTCGGGCAGAGAAAAAAGATTTCTCCGCCAATA ATTCGGCTGAGGACAAAACC
Downstream 100 bases:
>100_bases ATAAGGAAGGGATCAACATGAAGGGATAAAAAGACTGCAGGAAGGAGACGCACGGAAGGCTCCCGGCTGTTTTTCAGGAA CAGGATCGTGATGGCGGGAA
Product: signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 503; Mature: 502
Protein sequence:
>503_residues MTLKTRLMIITLFGLAITMALWGWIQLSVLDRILREQQYKRLDNIAETLSAFYQRFPSARGLSALDTALKDHIQTDVRLA RIDIISLSGDDVDYIAGAGRVPYEWPENLIIRTDGKMEKHHYALQTEAGSAIGLLYPVHPEKGSSAKTMIGVILFSQSDM EILSRARWMLFFSTLGLLVIILLVMAVGYDFLIGRPLRRIIETIDHFRTGKQASRIPIDRSDEWGQLADHFNVMAGEIEN FIAQNQELNRGLELRVKEATLKVVQLQRQVNQLQQLKALGYLTATLAHDLGTPLHSIAGMTQLLLERDEWPPDTARKLEL ILQQTQRLNTVIQNVRRATRLPEPHFESIPVQRLLDDTLPLVEPVIQKSKVELLVQIAPDTPPLYVDNYRVQTALFNLIQ NALEAMPHGGKIFVSARVSNDRQAIAVTVQDTGPGIPPSMMGKICEPFFSTHPGEGIRGLGLAIVQDIVKAHAGSIDIQS QPHKGTCITLFFPIACRLQEIPG
Sequences:
>Translated_503_residues MTLKTRLMIITLFGLAITMALWGWIQLSVLDRILREQQYKRLDNIAETLSAFYQRFPSARGLSALDTALKDHIQTDVRLA RIDIISLSGDDVDYIAGAGRVPYEWPENLIIRTDGKMEKHHYALQTEAGSAIGLLYPVHPEKGSSAKTMIGVILFSQSDM EILSRARWMLFFSTLGLLVIILLVMAVGYDFLIGRPLRRIIETIDHFRTGKQASRIPIDRSDEWGQLADHFNVMAGEIEN FIAQNQELNRGLELRVKEATLKVVQLQRQVNQLQQLKALGYLTATLAHDLGTPLHSIAGMTQLLLERDEWPPDTARKLEL ILQQTQRLNTVIQNVRRATRLPEPHFESIPVQRLLDDTLPLVEPVIQKSKVELLVQIAPDTPPLYVDNYRVQTALFNLIQ NALEAMPHGGKIFVSARVSNDRQAIAVTVQDTGPGIPPSMMGKICEPFFSTHPGEGIRGLGLAIVQDIVKAHAGSIDIQS QPHKGTCITLFFPIACRLQEIPG >Mature_502_residues TLKTRLMIITLFGLAITMALWGWIQLSVLDRILREQQYKRLDNIAETLSAFYQRFPSARGLSALDTALKDHIQTDVRLAR IDIISLSGDDVDYIAGAGRVPYEWPENLIIRTDGKMEKHHYALQTEAGSAIGLLYPVHPEKGSSAKTMIGVILFSQSDME ILSRARWMLFFSTLGLLVIILLVMAVGYDFLIGRPLRRIIETIDHFRTGKQASRIPIDRSDEWGQLADHFNVMAGEIENF IAQNQELNRGLELRVKEATLKVVQLQRQVNQLQQLKALGYLTATLAHDLGTPLHSIAGMTQLLLERDEWPPDTARKLELI LQQTQRLNTVIQNVRRATRLPEPHFESIPVQRLLDDTLPLVEPVIQKSKVELLVQIAPDTPPLYVDNYRVQTALFNLIQN ALEAMPHGGKIFVSARVSNDRQAIAVTVQDTGPGIPPSMMGKICEPFFSTHPGEGIRGLGLAIVQDIVKAHAGSIDIQSQ PHKGTCITLFFPIACRLQEIPG
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788549, Length=230, Percent_Identity=31.304347826087, Blast_Score=118, Evalue=7e-28, Organism=Escherichia coli, GI1790436, Length=229, Percent_Identity=30.1310043668122, Blast_Score=114, Evalue=1e-26, Organism=Escherichia coli, GI1789149, Length=375, Percent_Identity=25.8666666666667, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI87081816, Length=358, Percent_Identity=26.8156424581006, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1790346, Length=280, Percent_Identity=27.8571428571429, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1790300, Length=243, Percent_Identity=29.2181069958848, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI145693157, Length=252, Percent_Identity=25.3968253968254, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1786600, Length=259, Percent_Identity=27.4131274131274, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1788393, Length=316, Percent_Identity=24.3670886075949, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1790861, Length=212, Percent_Identity=27.8301886792453, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1786912, Length=234, Percent_Identity=26.9230769230769, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI48994928, Length=223, Percent_Identity=26.0089686098655, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 56356; Mature: 56225
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLKTRLMIITLFGLAITMALWGWIQLSVLDRILREQQYKRLDNIAETLSAFYQRFPSAR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GLSALDTALKDHIQTDVRLARIDIISLSGDDVDYIAGAGRVPYEWPENLIIRTDGKMEKH CHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCHHHCCCCCCCCCCCCCEEEECCCCCHHH HYALQTEAGSAIGLLYPVHPEKGSSAKTMIGVILFSQSDMEILSRARWMLFFSTLGLLVI HEEEEECCCCEEEEEEECCCCCCCCHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH ILLVMAVGYDFLIGRPLRRIIETIDHFRTGKQASRIPIDRSDEWGQLADHFNVMAGEIEN HHHHHHHCHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH FIAQNQELNRGLELRVKEATLKVVQLQRQVNQLQQLKALGYLTATLAHDLGTPLHSIAGM HHHCCHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH TQLLLERDEWPPDTARKLELILQQTQRLNTVIQNVRRATRLPEPHFESIPVQRLLDDTLP HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH LVEPVIQKSKVELLVQIAPDTPPLYVDNYRVQTALFNLIQNALEAMPHGGKIFVSARVSN HHHHHHHHHHHEEEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECC DRQAIAVTVQDTGPGIPPSMMGKICEPFFSTHPGEGIRGLGLAIVQDIVKAHAGSIDIQS CCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC QPHKGTCITLFFPIACRLQEIPG CCCCCCEEEEEEHHHHHHHCCCC >Mature Secondary Structure TLKTRLMIITLFGLAITMALWGWIQLSVLDRILREQQYKRLDNIAETLSAFYQRFPSAR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GLSALDTALKDHIQTDVRLARIDIISLSGDDVDYIAGAGRVPYEWPENLIIRTDGKMEKH CHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCHHHCCCCCCCCCCCCCEEEECCCCCHHH HYALQTEAGSAIGLLYPVHPEKGSSAKTMIGVILFSQSDMEILSRARWMLFFSTLGLLVI HEEEEECCCCEEEEEEECCCCCCCCHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH ILLVMAVGYDFLIGRPLRRIIETIDHFRTGKQASRIPIDRSDEWGQLADHFNVMAGEIEN HHHHHHHCHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH FIAQNQELNRGLELRVKEATLKVVQLQRQVNQLQQLKALGYLTATLAHDLGTPLHSIAGM HHHCCHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH TQLLLERDEWPPDTARKLELILQQTQRLNTVIQNVRRATRLPEPHFESIPVQRLLDDTLP HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH LVEPVIQKSKVELLVQIAPDTPPLYVDNYRVQTALFNLIQNALEAMPHGGKIFVSARVSN HHHHHHHHHHHEEEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECC DRQAIAVTVQDTGPGIPPSMMGKICEPFFSTHPGEGIRGLGLAIVQDIVKAHAGSIDIQS CCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC QPHKGTCITLFFPIACRLQEIPG CCCCCCEEEEEEHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11243806 [H]