| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is apgM [H]
Identifier: 85860484
GI number: 85860484
Start: 2661956
End: 2663164
Strand: Direct
Name: apgM [H]
Synonym: SYN_02641
Alternate gene names: 85860484
Gene position: 2661956-2663164 (Clockwise)
Preceding gene: 85860483
Following gene: 85860491
Centisome position: 83.73
GC content: 59.97
Gene sequence:
>1209_bases ATGGACCCTCAATGGATGGATAAACTGGTCATCAAGAATGACGCAAAGATGGTTTTTCTCATTATGGACGGACTGGGAGG ACTGCCCATGGACGGCAGACCGGGAACGGAGCTGGAAACGGCGAAAACCCCCAATCTGGACGCCCTGGCCAGAGGCGGCG TATGCGGCCTCCTGGATCCCATCGCCCCCGGCATCACACCGGGAAGCGGACCGGCCCACTTTGCCCTGTTCGGTTACGAT CCGGTGTCCACCAATGTGGGGCGGGGGCTTCTCTCCGCTGCCGGCCTGGATTTCCCCATAACGGAGCGGGATCTCTGCAT GCGGGTCAATTTTGCCACAATGGACGCCTGGGGGCAGATCACCGATCGCCGGGCTGGCCGCATCGATACAGAAACCAACG AACGGCTCTGCCGAAAGCTGAAGGAAGGCATCCGTCCCGCTCCCGGAACGGAGCTCTTTTTTGCCACGGAAAAGGAACAT CGGGCATTGATCGTGTTGCGCGGAGACAACCTCCACGAGGAAATCACCGAAACCGATCCTCAGCAGACCGGCCTGCCGCC GATATCTCCCCGGGCGCTCGTCCCGGAAGCTGAATTCACATCAGGCCTGCTGACGGACCTGCTGGCTCAGGCAAAAATGG TCCTTGCCGATGAACCCAAAGCCAACATGCTCCTCCTGCGGGGTTATGCCCGATATCATCGTTTCAAAAGCATGTCGGAA CGATTCGGTCTTTCTCCCGTGGCCATTGCGAGCTACCCCATGTACCGCGGCATCGCCCGCCTGCTGGGAATGACCGTTCA CACCCCGACATCCTCTCTGGAGGAAGAAATCTCGGCCCTGGAAACGACCTGGCCGGATTACGACTTCTTCTTCGTGCACG TCAAACCGACGGATTCCCGGGGTGAAGACGGCAAGTTCGATGAGAAGGTGAAGGTCATCGAAACAGTGGACGCCCTCCTT CCCCGGATTACGGCGCTGCATCCCGATGTCCTGGTCGTCACCGGCGATCACTCCACTCCCGCCACCCTTGCCGCACACAG CTGGCATCCCGTCCCTGTTCTCCTCGCCGCCAAAACATGCCGCCCGGACCGGGTGGAACACTTCGGCGAAGGGGATTGTC TTTTCGGAGGGCTGGGAAGAATGCCTACGTCTTCCCTGATGACCGTGGCTTTGGCCCATGCCGGACGTCTGACCAAATTC GGGGCCTGA
Upstream 100 bases:
>100_bases TAAGAACAGGTATTCAACCAGATAACTGATTAACGATTGACCCGAGGGCGGGGACGGTTCTGTATTTTCCGTCCCCGCTC CCTGGATTCAGGAAGAGATC
Downstream 100 bases:
>100_bases GAGGCCGACGCCGGAGGAGGGATCCGAGTTCAGTCATTTTTCCGCTCGGCCTCCCGAAGCTCGCGATGCAGAATTTTTCC CACCCTGGATTTAGGCAGTT
Product: cofactor-independent phosphoglycerate mutase
Products: NA
Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; aPGAM [H]
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MDPQWMDKLVIKNDAKMVFLIMDGLGGLPMDGRPGTELETAKTPNLDALARGGVCGLLDPIAPGITPGSGPAHFALFGYD PVSTNVGRGLLSAAGLDFPITERDLCMRVNFATMDAWGQITDRRAGRIDTETNERLCRKLKEGIRPAPGTELFFATEKEH RALIVLRGDNLHEEITETDPQQTGLPPISPRALVPEAEFTSGLLTDLLAQAKMVLADEPKANMLLLRGYARYHRFKSMSE RFGLSPVAIASYPMYRGIARLLGMTVHTPTSSLEEEISALETTWPDYDFFFVHVKPTDSRGEDGKFDEKVKVIETVDALL PRITALHPDVLVVTGDHSTPATLAAHSWHPVPVLLAAKTCRPDRVEHFGEGDCLFGGLGRMPTSSLMTVALAHAGRLTKF GA
Sequences:
>Translated_402_residues MDPQWMDKLVIKNDAKMVFLIMDGLGGLPMDGRPGTELETAKTPNLDALARGGVCGLLDPIAPGITPGSGPAHFALFGYD PVSTNVGRGLLSAAGLDFPITERDLCMRVNFATMDAWGQITDRRAGRIDTETNERLCRKLKEGIRPAPGTELFFATEKEH RALIVLRGDNLHEEITETDPQQTGLPPISPRALVPEAEFTSGLLTDLLAQAKMVLADEPKANMLLLRGYARYHRFKSMSE RFGLSPVAIASYPMYRGIARLLGMTVHTPTSSLEEEISALETTWPDYDFFFVHVKPTDSRGEDGKFDEKVKVIETVDALL PRITALHPDVLVVTGDHSTPATLAAHSWHPVPVLLAAKTCRPDRVEHFGEGDCLFGGLGRMPTSSLMTVALAHAGRLTKF GA >Mature_402_residues MDPQWMDKLVIKNDAKMVFLIMDGLGGLPMDGRPGTELETAKTPNLDALARGGVCGLLDPIAPGITPGSGPAHFALFGYD PVSTNVGRGLLSAAGLDFPITERDLCMRVNFATMDAWGQITDRRAGRIDTETNERLCRKLKEGIRPAPGTELFFATEKEH RALIVLRGDNLHEEITETDPQQTGLPPISPRALVPEAEFTSGLLTDLLAQAKMVLADEPKANMLLLRGYARYHRFKSMSE RFGLSPVAIASYPMYRGIARLLGMTVHTPTSSLEEEISALETTWPDYDFFFVHVKPTDSRGEDGKFDEKVKVIETVDALL PRITALHPDVLVVTGDHSTPATLAAHSWHPVPVLLAAKTCRPDRVEHFGEGDCLFGGLGRMPTSSLMTVALAHAGRLTKF GA
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG3635
COG function: function code G; Predicted phosphoglycerate mutase, AP superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family. A-PGAM subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR004456 - InterPro: IPR006124 [H]
Pfam domain/function: PF01676 Metalloenzyme; PF10143 PhosphMutase [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 43851; Mature: 43851
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPQWMDKLVIKNDAKMVFLIMDGLGGLPMDGRPGTELETAKTPNLDALARGGVCGLLDP CCHHHHHHHHEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHH IAPGITPGSGPAHFALFGYDPVSTNVGRGLLSAAGLDFPITERDLCMRVNFATMDAWGQI HCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEEHHHCHHHHH TDRRAGRIDTETNERLCRKLKEGIRPAPGTELFFATEKEHRALIVLRGDNLHEEITETDP HHCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEECCCCHHHHHCCCC QQTGLPPISPRALVPEAEFTSGLLTDLLAQAKMVLADEPKANMLLLRGYARYHRFKSMSE HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHH RFGLSPVAIASYPMYRGIARLLGMTVHTPTSSLEEEISALETTWPDYDFFFVHVKPTDSR HHCCCCHHHHHCHHHHHHHHHHCCEEECCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCC GEDGKFDEKVKVIETVDALLPRITALHPDVLVVTGDHSTPATLAAHSWHPVPVLLAAKTC CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCCEEEEEECCC RPDRVEHFGEGDCLFGGLGRMPTSSLMTVALAHAGRLTKFGA CCHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHCCCHHCCCC >Mature Secondary Structure MDPQWMDKLVIKNDAKMVFLIMDGLGGLPMDGRPGTELETAKTPNLDALARGGVCGLLDP CCHHHHHHHHEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHH IAPGITPGSGPAHFALFGYDPVSTNVGRGLLSAAGLDFPITERDLCMRVNFATMDAWGQI HCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEEHHHCHHHHH TDRRAGRIDTETNERLCRKLKEGIRPAPGTELFFATEKEHRALIVLRGDNLHEEITETDP HHCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEECCCCHHHHHCCCC QQTGLPPISPRALVPEAEFTSGLLTDLLAQAKMVLADEPKANMLLLRGYARYHRFKSMSE HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHH RFGLSPVAIASYPMYRGIARLLGMTVHTPTSSLEEEISALETTWPDYDFFFVHVKPTDSR HHCCCCHHHHHCHHHHHHHHHHCCEEECCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCC GEDGKFDEKVKVIETVDALLPRITALHPDVLVVTGDHSTPATLAAHSWHPVPVLLAAKTC CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCCEEEEEECCC RPDRVEHFGEGDCLFGGLGRMPTSSLMTVALAHAGRLTKFGA CCHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA