Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85860427

Identifier: 85860427

GI number: 85860427

Start: 2594996

End: 2595676

Strand: Direct

Name: 85860427

Synonym: SYN_02698

Alternate gene names: NA

Gene position: 2594996-2595676 (Clockwise)

Preceding gene: 85860426

Following gene: 85860468

Centisome position: 81.62

GC content: 56.53

Gene sequence:

>681_bases
ATGAGGGTGGGCTTACATCTTGATATTGTTCTGGAAGAAGACCTGGAGCGGGACCGGGTCGTCGCGAGAAAAGCTGTGGT
TTATGATGTTGTGGAACGCCTGATCACCATTTCCCAGACATCGCCTTCTTTCGTCAGAAGGCATCTCGGTGACCGGATCA
ACGCAAGCTACGTCACCACCGTCGGAGAGGGAGAGAACAAAAGACCTGTCCGGATGGGCTTCCCGGCGACCATTCTGGAG
TATCGGGAAGATTATCCCCTCGCTTCATCCAACCTTGTCCCCGCCTTCGTTCTGCAACAGGACGGGAAACCCGTGGAAAT
CAATCTGCGGATGCACTACCGCGTGCACCCGATGATAGAAAGCGACCTCGCCCTGCAGGCAAACGGCGAAACGGTCAACC
TGATTGACATCTCCCTCGGCGGGATCCAGTTCAGTCACCGAAGAAAGGAACCGCCCCTGAAATACGGAGGCATCGTCCTG
AAGCTCTCGTCCGGCAGCAGAACCTTCAGGATCGACGGGCAGATCATCCGGATCGACACCCCCGTTTCGCCCGGCGGCCG
CGGCGAGGATATGGAATACGTCATGGTCAAATTCCTCAGCCTCAACCGGGACGCGGAAGCCTTCCTGGGAAAGAAAATCC
TCATGATCGAACGCGAGCTTATCGCCGCCGGAAAAGTCTGA

Upstream 100 bases:

>100_bases
TTCGTGTTCAATGTTCAAGGTTCGATGTTCGACGTTCAAGGTTTCGGGTTCGAGGTTATTGTGAAAAACAAGGGGGGTTG
TTTCTGAAAGGGTTTTCTGC

Downstream 100 bases:

>100_bases
AAGCATGAGGGCGATAAATGGGCGCAGTTCCTGTTTATTGCCGCTGTTTATCGCCGCTGTTTACTGCCGCTGTGTATTGC
CCATGAGGAATCTCCGGCCG

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MRVGLHLDIVLEEDLERDRVVARKAVVYDVVERLITISQTSPSFVRRHLGDRINASYVTTVGEGENKRPVRMGFPATILE
YREDYPLASSNLVPAFVLQQDGKPVEINLRMHYRVHPMIESDLALQANGETVNLIDISLGGIQFSHRRKEPPLKYGGIVL
KLSSGSRTFRIDGQIIRIDTPVSPGGRGEDMEYVMVKFLSLNRDAEAFLGKKILMIERELIAAGKV

Sequences:

>Translated_226_residues
MRVGLHLDIVLEEDLERDRVVARKAVVYDVVERLITISQTSPSFVRRHLGDRINASYVTTVGEGENKRPVRMGFPATILE
YREDYPLASSNLVPAFVLQQDGKPVEINLRMHYRVHPMIESDLALQANGETVNLIDISLGGIQFSHRRKEPPLKYGGIVL
KLSSGSRTFRIDGQIIRIDTPVSPGGRGEDMEYVMVKFLSLNRDAEAFLGKKILMIERELIAAGKV
>Mature_226_residues
MRVGLHLDIVLEEDLERDRVVARKAVVYDVVERLITISQTSPSFVRRHLGDRINASYVTTVGEGENKRPVRMGFPATILE
YREDYPLASSNLVPAFVLQQDGKPVEINLRMHYRVHPMIESDLALQANGETVNLIDISLGGIQFSHRRKEPPLKYGGIVL
KLSSGSRTFRIDGQIIRIDTPVSPGGRGEDMEYVMVKFLSLNRDAEAFLGKKILMIERELIAAGKV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25412; Mature: 25412

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVGLHLDIVLEEDLERDRVVARKAVVYDVVERLITISQTSPSFVRRHLGDRINASYVTT
CEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHCCCCCCEEEEE
VGEGENKRPVRMGFPATILEYREDYPLASSNLVPAFVLQQDGKPVEINLRMHYRVHPMIE
ECCCCCCCCEEECCCHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEEEEEEEEECCCCC
SDLALQANGETVNLIDISLGGIQFSHRRKEPPLKYGGIVLKLSSGSRTFRIDGQIIRIDT
CCEEEEECCCEEEEEEEEECCEEECCCCCCCCCCCCCEEEEECCCCEEEEECCEEEEEEC
PVSPGGRGEDMEYVMVKFLSLNRDAEAFLGKKILMIERELIAAGKV
CCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCEEEEEEHHHHHCCCC
>Mature Secondary Structure
MRVGLHLDIVLEEDLERDRVVARKAVVYDVVERLITISQTSPSFVRRHLGDRINASYVTT
CEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHCCCCCCEEEEE
VGEGENKRPVRMGFPATILEYREDYPLASSNLVPAFVLQQDGKPVEINLRMHYRVHPMIE
ECCCCCCCCEEECCCHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEEEEEEEEECCCCC
SDLALQANGETVNLIDISLGGIQFSHRRKEPPLKYGGIVLKLSSGSRTFRIDGQIIRIDT
CCEEEEECCCEEEEEEEEECCEEECCCCCCCCCCCCCEEEEECCCCEEEEECCEEEEEEC
PVSPGGRGEDMEYVMVKFLSLNRDAEAFLGKKILMIERELIAAGKV
CCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCEEEEEEHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA