| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85860427
Identifier: 85860427
GI number: 85860427
Start: 2594996
End: 2595676
Strand: Direct
Name: 85860427
Synonym: SYN_02698
Alternate gene names: NA
Gene position: 2594996-2595676 (Clockwise)
Preceding gene: 85860426
Following gene: 85860468
Centisome position: 81.62
GC content: 56.53
Gene sequence:
>681_bases ATGAGGGTGGGCTTACATCTTGATATTGTTCTGGAAGAAGACCTGGAGCGGGACCGGGTCGTCGCGAGAAAAGCTGTGGT TTATGATGTTGTGGAACGCCTGATCACCATTTCCCAGACATCGCCTTCTTTCGTCAGAAGGCATCTCGGTGACCGGATCA ACGCAAGCTACGTCACCACCGTCGGAGAGGGAGAGAACAAAAGACCTGTCCGGATGGGCTTCCCGGCGACCATTCTGGAG TATCGGGAAGATTATCCCCTCGCTTCATCCAACCTTGTCCCCGCCTTCGTTCTGCAACAGGACGGGAAACCCGTGGAAAT CAATCTGCGGATGCACTACCGCGTGCACCCGATGATAGAAAGCGACCTCGCCCTGCAGGCAAACGGCGAAACGGTCAACC TGATTGACATCTCCCTCGGCGGGATCCAGTTCAGTCACCGAAGAAAGGAACCGCCCCTGAAATACGGAGGCATCGTCCTG AAGCTCTCGTCCGGCAGCAGAACCTTCAGGATCGACGGGCAGATCATCCGGATCGACACCCCCGTTTCGCCCGGCGGCCG CGGCGAGGATATGGAATACGTCATGGTCAAATTCCTCAGCCTCAACCGGGACGCGGAAGCCTTCCTGGGAAAGAAAATCC TCATGATCGAACGCGAGCTTATCGCCGCCGGAAAAGTCTGA
Upstream 100 bases:
>100_bases TTCGTGTTCAATGTTCAAGGTTCGATGTTCGACGTTCAAGGTTTCGGGTTCGAGGTTATTGTGAAAAACAAGGGGGGTTG TTTCTGAAAGGGTTTTCTGC
Downstream 100 bases:
>100_bases AAGCATGAGGGCGATAAATGGGCGCAGTTCCTGTTTATTGCCGCTGTTTATCGCCGCTGTTTACTGCCGCTGTGTATTGC CCATGAGGAATCTCCGGCCG
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MRVGLHLDIVLEEDLERDRVVARKAVVYDVVERLITISQTSPSFVRRHLGDRINASYVTTVGEGENKRPVRMGFPATILE YREDYPLASSNLVPAFVLQQDGKPVEINLRMHYRVHPMIESDLALQANGETVNLIDISLGGIQFSHRRKEPPLKYGGIVL KLSSGSRTFRIDGQIIRIDTPVSPGGRGEDMEYVMVKFLSLNRDAEAFLGKKILMIERELIAAGKV
Sequences:
>Translated_226_residues MRVGLHLDIVLEEDLERDRVVARKAVVYDVVERLITISQTSPSFVRRHLGDRINASYVTTVGEGENKRPVRMGFPATILE YREDYPLASSNLVPAFVLQQDGKPVEINLRMHYRVHPMIESDLALQANGETVNLIDISLGGIQFSHRRKEPPLKYGGIVL KLSSGSRTFRIDGQIIRIDTPVSPGGRGEDMEYVMVKFLSLNRDAEAFLGKKILMIERELIAAGKV >Mature_226_residues MRVGLHLDIVLEEDLERDRVVARKAVVYDVVERLITISQTSPSFVRRHLGDRINASYVTTVGEGENKRPVRMGFPATILE YREDYPLASSNLVPAFVLQQDGKPVEINLRMHYRVHPMIESDLALQANGETVNLIDISLGGIQFSHRRKEPPLKYGGIVL KLSSGSRTFRIDGQIIRIDTPVSPGGRGEDMEYVMVKFLSLNRDAEAFLGKKILMIERELIAAGKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25412; Mature: 25412
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVGLHLDIVLEEDLERDRVVARKAVVYDVVERLITISQTSPSFVRRHLGDRINASYVTT CEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHCCCCCCEEEEE VGEGENKRPVRMGFPATILEYREDYPLASSNLVPAFVLQQDGKPVEINLRMHYRVHPMIE ECCCCCCCCEEECCCHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEEEEEEEEECCCCC SDLALQANGETVNLIDISLGGIQFSHRRKEPPLKYGGIVLKLSSGSRTFRIDGQIIRIDT CCEEEEECCCEEEEEEEEECCEEECCCCCCCCCCCCCEEEEECCCCEEEEECCEEEEEEC PVSPGGRGEDMEYVMVKFLSLNRDAEAFLGKKILMIERELIAAGKV CCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCEEEEEEHHHHHCCCC >Mature Secondary Structure MRVGLHLDIVLEEDLERDRVVARKAVVYDVVERLITISQTSPSFVRRHLGDRINASYVTT CEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHCCCCCCEEEEE VGEGENKRPVRMGFPATILEYREDYPLASSNLVPAFVLQQDGKPVEINLRMHYRVHPMIE ECCCCCCCCEEECCCHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEEEEEEEEECCCCC SDLALQANGETVNLIDISLGGIQFSHRRKEPPLKYGGIVLKLSSGSRTFRIDGQIIRIDT CCEEEEECCCEEEEEEEEECCEEECCCCCCCCCCCCCEEEEECCCCEEEEECCEEEEEEC PVSPGGRGEDMEYVMVKFLSLNRDAEAFLGKKILMIERELIAAGKV CCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCEEEEEEHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA