| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is hipO [H]
Identifier: 85860408
GI number: 85860408
Start: 2576176
End: 2577501
Strand: Direct
Name: hipO [H]
Synonym: SYN_00083
Alternate gene names: 85860408
Gene position: 2576176-2577501 (Clockwise)
Preceding gene: 85860407
Following gene: 85860409
Centisome position: 81.03
GC content: 61.69
Gene sequence:
>1326_bases TTGGCGCAATGCGCCAACTGGCATGGATCTGAAGCTAAGATCACGGAAAGGAGCCTCATGTCCCCCGGCAAACTCACAAA GCCCGAATCTCATGACCCGTTGAAAACGCTTTCCGCGATTCAGGAAAAGGACTATCCTTATCTTGAAAGTCTCTATCAGG ATCTCCACCGCCATCCGGAACTTTCCGGAAGGGAAGAGAAAACGTCCAGGCGGATGACCGTGGAGATGGAGCAGGCAGGT TTCCGGGCTACGCCGGGCATCGGCGGTAACGGGGTGGTGGGGATGCTGGAAAACGGTCCCGGTCCGGTCGTCATGGTCCG GGCGGACATGGACGCCCTGCCGATTGAGGAGAAAACCGGTCTCCCTTACGCCAGCCGGGTCAGGACCCTGATGGAATCAG GGCAGGAGGTCGGCGTGATGCATGCCTGCGGCCACGATGTCCACATGACCGTCCTGATTGGGGCGGCACGGCTGCTGGCG CGATTCCGCAATTGCTGGCAGGGAACCCTGCTTCTGGTCGCTCAGCCTGCCGAGGAAAACGCCGCCGGCGCGGCGGCCAT GATCGCCGACGGCCTTTTCATCCGCTTTCCCCGTCCCGATTTCGCTCTTGGCCTCCATGTTCTCCCCGGGCCGGCAGGCG CCGTTCTTTATCACGAAGGTTTCTGGTTCGCCGGCTCGACAACTCTCGAGCTGACCGTGTACGGGAAAGGAGGACATGCC GCCCGGCCTCATGAGACGCGGGACCCCGTCGTTCTGGCTGCCCAGATGATCCTCGCGTTTCAGACGGTGGTCAGCCGGGA AACCGATCCGATGGAACCGGCGGTGCTCACCGTATCCTCTTTTCATGCGGGAAACCGGGACAACGTCATTCCGGAAACGG CCACTCTCCAGATCAGCCTCCGCGCGTTCAGCCGCGAACAGCATGAGCGGATGATTTCCGCCCTGAAACGGATCGCCGAG GGCATCGCCAGGACGGGCGGCATCCCCGAGGATCAGCTTCCCCGACTGTCAGTCAGATCATCCACGCCGGTCCTCTACAA CGATCCTCGGCTCACCCGCAGACTCGTCCGCCGGTTCCGCCGGACTTTCGGCCGTTCCCGGGTCGCTGAAGTGCCGGCAA TGACGGCCTCGGAGGATTTCTCCTGTTTCGGGCAGGCGGGAATTCCTCTCTGCTATTTCGGACTGGGAATGGCGGATCCC CAGGGAGAAAGCCCTCCCCTTCACAGTCCTTACATGGCTCCTCTCCCGGAACCGACGATTTCGACCGGAGTTGCCGCCAT GACCGCAGCCGTTCTGGAACTGCTCCCGGCTCTTGATCAAAGCTGA
Upstream 100 bases:
>100_bases GGAAGCTGGCTGGGCGCCATCCTGGCGAATCATCTTTCCGGTCCGCATTTGAAACTGGCCTTTGGAATTTTTGTAGCGGG TCTCGGCATCTACCTGATCA
Downstream 100 bases:
>100_bases TGCTCAGGCGGCAAGGCAGAGGCAGAGAAGGTTCAATTTTTAAGGTTCAAGATTCTATGTTCTACGTTTCAGGTCAGGAT TTCCAGGCGAAAAACTTAGA
Product: metal-dependent amidase/aminoacylase/carboxypeptidase
Products: NA
Alternate protein names: Benzoylglycine amidohydrolase; Hippuricase [H]
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MAQCANWHGSEAKITERSLMSPGKLTKPESHDPLKTLSAIQEKDYPYLESLYQDLHRHPELSGREEKTSRRMTVEMEQAG FRATPGIGGNGVVGMLENGPGPVVMVRADMDALPIEEKTGLPYASRVRTLMESGQEVGVMHACGHDVHMTVLIGAARLLA RFRNCWQGTLLLVAQPAEENAAGAAAMIADGLFIRFPRPDFALGLHVLPGPAGAVLYHEGFWFAGSTTLELTVYGKGGHA ARPHETRDPVVLAAQMILAFQTVVSRETDPMEPAVLTVSSFHAGNRDNVIPETATLQISLRAFSREQHERMISALKRIAE GIARTGGIPEDQLPRLSVRSSTPVLYNDPRLTRRLVRRFRRTFGRSRVAEVPAMTASEDFSCFGQAGIPLCYFGLGMADP QGESPPLHSPYMAPLPEPTISTGVAAMTAAVLELLPALDQS
Sequences:
>Translated_441_residues MAQCANWHGSEAKITERSLMSPGKLTKPESHDPLKTLSAIQEKDYPYLESLYQDLHRHPELSGREEKTSRRMTVEMEQAG FRATPGIGGNGVVGMLENGPGPVVMVRADMDALPIEEKTGLPYASRVRTLMESGQEVGVMHACGHDVHMTVLIGAARLLA RFRNCWQGTLLLVAQPAEENAAGAAAMIADGLFIRFPRPDFALGLHVLPGPAGAVLYHEGFWFAGSTTLELTVYGKGGHA ARPHETRDPVVLAAQMILAFQTVVSRETDPMEPAVLTVSSFHAGNRDNVIPETATLQISLRAFSREQHERMISALKRIAE GIARTGGIPEDQLPRLSVRSSTPVLYNDPRLTRRLVRRFRRTFGRSRVAEVPAMTASEDFSCFGQAGIPLCYFGLGMADP QGESPPLHSPYMAPLPEPTISTGVAAMTAAVLELLPALDQS >Mature_440_residues AQCANWHGSEAKITERSLMSPGKLTKPESHDPLKTLSAIQEKDYPYLESLYQDLHRHPELSGREEKTSRRMTVEMEQAGF RATPGIGGNGVVGMLENGPGPVVMVRADMDALPIEEKTGLPYASRVRTLMESGQEVGVMHACGHDVHMTVLIGAARLLAR FRNCWQGTLLLVAQPAEENAAGAAAMIADGLFIRFPRPDFALGLHVLPGPAGAVLYHEGFWFAGSTTLELTVYGKGGHAA RPHETRDPVVLAAQMILAFQTVVSRETDPMEPAVLTVSSFHAGNRDNVIPETATLQISLRAFSREQHERMISALKRIAEG IARTGGIPEDQLPRLSVRSSTPVLYNDPRLTRRLVRRFRRTFGRSRVAEVPAMTASEDFSCFGQAGIPLCYFGLGMADPQ GESPPLHSPYMAPLPEPTISTGVAAMTAAVLELLPALDQS
Specific function: Required But Not Essential For Aminobenzoyl-Glutamate Utilization. May Participate In Hydrolysis Of Aminobenzoyl- Glutamate To Aminobenzoate, Either Alone Or In Combination With Abgb. [C]
COG id: COG1473
COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20 family [H]
Homologues:
Organism=Escherichia coli, GI87081880, Length=247, Percent_Identity=29.9595141700405, Blast_Score=80, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017439 - InterPro: IPR010168 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: =3.5.1.32 [H]
Molecular weight: Translated: 47950; Mature: 47818
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQCANWHGSEAKITERSLMSPGKLTKPESHDPLKTLSAIQEKDYPYLESLYQDLHRHPE CCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCC LSGREEKTSRRMTVEMEQAGFRATPGIGGNGVVGMLENGPGPVVMVRADMDALPIEEKTG CCCCHHHHCCCEEEEHHHCCCEECCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCC LPYASRVRTLMESGQEVGVMHACGHDVHMTVLIGAARLLARFRNCWQGTLLLVAQPAEEN CCHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC AAGAAAMIADGLFIRFPRPDFALGLHVLPGPAGAVLYHEGFWFAGSTTLELTVYGKGGHA CCCHHHHHHCCEEEEECCCCCEEEEEECCCCCCEEEEECCEEEECCEEEEEEEEECCCCC ARPHETRDPVVLAAQMILAFQTVVSRETDPMEPAVLTVSSFHAGNRDNVIPETATLQISL CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEH RAFSREQHERMISALKRIAEGIARTGGIPEDQLPRLSVRSSTPVLYNDPRLTRRLVRRFR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEECCHHHHHHHHHHHH RTFGRSRVAEVPAMTASEDFSCFGQAGIPLCYFGLGMADPQGESPPLHSPYMAPLPEPTI HHHCCCHHHHCCCCCCCCCCHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHH STGVAAMTAAVLELLPALDQS HHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AQCANWHGSEAKITERSLMSPGKLTKPESHDPLKTLSAIQEKDYPYLESLYQDLHRHPE CCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCC LSGREEKTSRRMTVEMEQAGFRATPGIGGNGVVGMLENGPGPVVMVRADMDALPIEEKTG CCCCHHHHCCCEEEEHHHCCCEECCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCC LPYASRVRTLMESGQEVGVMHACGHDVHMTVLIGAARLLARFRNCWQGTLLLVAQPAEEN CCHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC AAGAAAMIADGLFIRFPRPDFALGLHVLPGPAGAVLYHEGFWFAGSTTLELTVYGKGGHA CCCHHHHHHCCEEEEECCCCCEEEEEECCCCCCEEEEECCEEEECCEEEEEEEEECCCCC ARPHETRDPVVLAAQMILAFQTVVSRETDPMEPAVLTVSSFHAGNRDNVIPETATLQISL CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEH RAFSREQHERMISALKRIAEGIARTGGIPEDQLPRLSVRSSTPVLYNDPRLTRRLVRRFR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEECCHHHHHHHHHHHH RTFGRSRVAEVPAMTASEDFSCFGQAGIPLCYFGLGMADPQGESPPLHSPYMAPLPEPTI HHHCCCHHHHCCCCCCCCCCHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHH STGVAAMTAAVLELLPALDQS HHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7730270; 10688204 [H]