Click here to switch to the map view.

The map label for this gene is 85860294

Identifier: 85860294

GI number: 85860294

Start: 2475498

End: 2475983

Strand: Direct

Name: 85860294

Synonym: SYN_01217

Alternate gene names: NA

Gene position: 2475498-2475983 (Clockwise)

Preceding gene: 85860285

Following gene: 85860295

Centisome position: 77.86

GC content: 51.23

Gene sequence:

>486_bases
ATGAGACGATCTTTGAATAAGATGGCCGAAGAGTTCAGAATCTATTGGAGGCACTACATATTGCAGAGCCTCTTTGCCAC
GCTGGCTGTGTTTATCGTCCTTTATTTGCTTACTCTGCAACACGCCATCATCATCGCTTCGATCGGCGCCACGGCTTTCA
TTGTTTTCACGATGCCGGACAATATAACCGCCCAGGCATGGAACGTGATCGGTGGACATGTCGTGGGACTGTCCTGCGGA
TTTCTGTTTTCCCTGATTCCCCACCCCACGCTGATTCCTTCGCTTCTGGTCTATTCTCTCGCCGTCGGGACTTCGATCTT
CACCATGGTTGTCACGGATACGGAGCATCCGCCGGCAGCCGGCACCGCTCTCGGAGTCGCCATAACCGGCATTTCCCTGC
ACGTATTTTGCGCGGTTACCCTGAGCATCATCCTGTTTTCAGTCATTCATCGATTCTTCAAACCTTATTTAAGAGATCTG
ACCTGA

Upstream 100 bases:

>100_bases
AAAGGAACTTTAGCCTGGAATGTGCTACAGACCTACTCATTGGTTACCTCAAAGAAATCGCCCTGAGGCGCGACCTGAAT
GATCAAGGTGGAGAATACAG

Downstream 100 bases:

>100_bases
AGGCGAATGAGGTTAATATGCAATGCGAAGATTTAACTTCAAGATTCTCCTTCTTCTTTCTCTGGGCCATCTGGTAACGG
ATATCTATCAAGGGGCGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MRRSLNKMAEEFRIYWRHYILQSLFATLAVFIVLYLLTLQHAIIIASIGATAFIVFTMPDNITAQAWNVIGGHVVGLSCG
FLFSLIPHPTLIPSLLVYSLAVGTSIFTMVVTDTEHPPAAGTALGVAITGISLHVFCAVTLSIILFSVIHRFFKPYLRDL
T

Sequences:

>Translated_161_residues
MRRSLNKMAEEFRIYWRHYILQSLFATLAVFIVLYLLTLQHAIIIASIGATAFIVFTMPDNITAQAWNVIGGHVVGLSCG
FLFSLIPHPTLIPSLLVYSLAVGTSIFTMVVTDTEHPPAAGTALGVAITGISLHVFCAVTLSIILFSVIHRFFKPYLRDL
T
>Mature_161_residues
MRRSLNKMAEEFRIYWRHYILQSLFATLAVFIVLYLLTLQHAIIIASIGATAFIVFTMPDNITAQAWNVIGGHVVGLSCG
FLFSLIPHPTLIPSLLVYSLAVGTSIFTMVVTDTEHPPAAGTALGVAITGISLHVFCAVTLSIILFSVIHRFFKPYLRDL
T

Specific function: Unknown

COG id: COG3448

COG function: function code T; CBS-domain-containing membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17750; Mature: 17750

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: PS00678 WD_REPEATS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRSLNKMAEEFRIYWRHYILQSLFATLAVFIVLYLLTLQHAIIIASIGATAFIVFTMPD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
NITAQAWNVIGGHVVGLSCGFLFSLIPHPTLIPSLLVYSLAVGTSIFTMVVTDTEHPPAA
CCHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCC
GTALGVAITGISLHVFCAVTLSIILFSVIHRFFKPYLRDLT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRRSLNKMAEEFRIYWRHYILQSLFATLAVFIVLYLLTLQHAIIIASIGATAFIVFTMPD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
NITAQAWNVIGGHVVGLSCGFLFSLIPHPTLIPSLLVYSLAVGTSIFTMVVTDTEHPPAA
CCHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCC
GTALGVAITGISLHVFCAVTLSIILFSVIHRFFKPYLRDLT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA