Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85860250

Identifier: 85860250

GI number: 85860250

Start: 2439232

End: 2440230

Strand: Direct

Name: 85860250

Synonym: SYN_02490

Alternate gene names: NA

Gene position: 2439232-2440230 (Clockwise)

Preceding gene: 85860248

Following gene: 85860251

Centisome position: 76.72

GC content: 53.95

Gene sequence:

>999_bases
ATGAGATACCTCGGACATCTTCCCATAAAAGATCCTCTTTACGGATATCTGAGCGATGACATTCTCCCGCGGCTCAGCGC
CTCAGGCCACTCTCCCGTATTCCGGGTCTATCAGATACCGGCCTCCAACGATGTCTACCTTTACGAAGATCAGGAAAACC
GGATAAACCTTGTGGGAAAATTCTTCAACGGCGTCAAGAATCGCTCACCAGAAATCGCCTTCCGTCACATGGAACGGGAA
TTCAACAACCTCAAGCATCTGAGAGGCATCGGCTTCACCTGCCACCCTCATTGCATCGCCCCTCCCCTCGGTTGCAATGC
ACGTCTCAACTGTGTCCTGATAGAGGAGTTCTGTCACGGCCTTTCGCTTGACTATTTTATCATCAAGGCCATCCGGGAGG
GGGCGCGGGAATGTCTTTTTCAAAAGCTCACCGCCCTCGCCTATTTTCTTGCGACGCTGCATAATCGGACCGCAACCGGA
AAAAAGGTGGACATGAGCGAGGACTGCGTCTACTTCGACCGGATTGTGGATTTTCTCAAAAATCGGGGACATGTCGGATG
GAGCGAGGCGGAAGACTTCCTCCTGCTGAAGGAGCAGTGGCGAAAAAAGGAATGCATGTGGGAAGACAACCAAGTCCTTG
TCCACGGTGATGTGACACCGGCCAATATCCTTTTCGGTGATGGCCTCGGGGTGATCGCCATCGATCTGGAGCGGATGAAA
AAAGCCGACCGGGTCTTCGATGTGGGCCGGGTGGCCGCCGAGATCAAGCATTTCTTCATGCAGCACGCCGGCAACGGGAC
GCAGGCGGAACCCTTTATCGGACACTTCTTATGGGAATATGCCTGCCACTTTCCGGATCGGGACAGAGCCTTTCGGTCCA
TCGTTCGCCGCATTCCGTTTCACATGGGAATGACCCTTCTGCGCATTGCCCGTAATCCCTGGATATCCGATGCATACCGC
CGGCAGTTGCTGGATGAAGCCAGGAAAACACTGAGGTAG

Upstream 100 bases:

>100_bases
AATTCGCACGCGTCGACAGACAAACAGGCCGGGATGCACAGTGGCTTGAAATCATCACCCTCATACCGCGTTTTAAAAAC
AAAGAATAAATCGAGATCTC

Downstream 100 bases:

>100_bases
ATTATTTATGGCCATTCATGGAATTCTCTTCGACCTTTACGGAACACTGATCGATATCAGGACCGACGAATCCCGGGAAG
ACATCTATCGCACCATCGCC

Product: cytoplasmic protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MRYLGHLPIKDPLYGYLSDDILPRLSASGHSPVFRVYQIPASNDVYLYEDQENRINLVGKFFNGVKNRSPEIAFRHMERE
FNNLKHLRGIGFTCHPHCIAPPLGCNARLNCVLIEEFCHGLSLDYFIIKAIREGARECLFQKLTALAYFLATLHNRTATG
KKVDMSEDCVYFDRIVDFLKNRGHVGWSEAEDFLLLKEQWRKKECMWEDNQVLVHGDVTPANILFGDGLGVIAIDLERMK
KADRVFDVGRVAAEIKHFFMQHAGNGTQAEPFIGHFLWEYACHFPDRDRAFRSIVRRIPFHMGMTLLRIARNPWISDAYR
RQLLDEARKTLR

Sequences:

>Translated_332_residues
MRYLGHLPIKDPLYGYLSDDILPRLSASGHSPVFRVYQIPASNDVYLYEDQENRINLVGKFFNGVKNRSPEIAFRHMERE
FNNLKHLRGIGFTCHPHCIAPPLGCNARLNCVLIEEFCHGLSLDYFIIKAIREGARECLFQKLTALAYFLATLHNRTATG
KKVDMSEDCVYFDRIVDFLKNRGHVGWSEAEDFLLLKEQWRKKECMWEDNQVLVHGDVTPANILFGDGLGVIAIDLERMK
KADRVFDVGRVAAEIKHFFMQHAGNGTQAEPFIGHFLWEYACHFPDRDRAFRSIVRRIPFHMGMTLLRIARNPWISDAYR
RQLLDEARKTLR
>Mature_332_residues
MRYLGHLPIKDPLYGYLSDDILPRLSASGHSPVFRVYQIPASNDVYLYEDQENRINLVGKFFNGVKNRSPEIAFRHMERE
FNNLKHLRGIGFTCHPHCIAPPLGCNARLNCVLIEEFCHGLSLDYFIIKAIREGARECLFQKLTALAYFLATLHNRTATG
KKVDMSEDCVYFDRIVDFLKNRGHVGWSEAEDFLLLKEQWRKKECMWEDNQVLVHGDVTPANILFGDGLGVIAIDLERMK
KADRVFDVGRVAAEIKHFFMQHAGNGTQAEPFIGHFLWEYACHFPDRDRAFRSIVRRIPFHMGMTLLRIARNPWISDAYR
RQLLDEARKTLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38530; Mature: 38530

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: PS00037 MYB_1 ; PS00109 PROTEIN_KINASE_TYR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYLGHLPIKDPLYGYLSDDILPRLSASGHSPVFRVYQIPASNDVYLYEDQENRINLVGK
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCHHHHHHH
FFNGVKNRSPEIAFRHMEREFNNLKHLRGIGFTCHPHCIAPPLGCNARLNCVLIEEFCHG
HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHCC
LSLDYFIIKAIREGARECLFQKLTALAYFLATLHNRTATGKKVDMSEDCVYFDRIVDFLK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
NRGHVGWSEAEDFLLLKEQWRKKECMWEDNQVLVHGDVTPANILFGDGLGVIAIDLERMK
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEECCCCEEEEEHHHHH
KADRVFDVGRVAAEIKHFFMQHAGNGTQAEPFIGHFLWEYACHFPDRDRAFRSIVRRIPF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCH
HMGMTLLRIARNPWISDAYRRQLLDEARKTLR
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRYLGHLPIKDPLYGYLSDDILPRLSASGHSPVFRVYQIPASNDVYLYEDQENRINLVGK
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCHHHHHHH
FFNGVKNRSPEIAFRHMEREFNNLKHLRGIGFTCHPHCIAPPLGCNARLNCVLIEEFCHG
HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHCC
LSLDYFIIKAIREGARECLFQKLTALAYFLATLHNRTATGKKVDMSEDCVYFDRIVDFLK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
NRGHVGWSEAEDFLLLKEQWRKKECMWEDNQVLVHGDVTPANILFGDGLGVIAIDLERMK
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEECCCCEEEEEHHHHH
KADRVFDVGRVAAEIKHFFMQHAGNGTQAEPFIGHFLWEYACHFPDRDRAFRSIVRRIPF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCH
HMGMTLLRIARNPWISDAYRRQLLDEARKTLR
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA