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The map label for this gene is ybfF [C]

Identifier: 85860108

GI number: 85860108

Start: 2316302

End: 2317228

Strand: Direct

Name: ybfF [C]

Synonym: SYN_00829

Alternate gene names: 85860108

Gene position: 2316302-2317228 (Clockwise)

Preceding gene: 85860107

Following gene: 85860109

Centisome position: 72.86

GC content: 56.42

Gene sequence:

>927_bases
ATGAAGTCGTTTTTACGCCCCGACATCAGCATCATCATCCCGGCGCATAACGAAGCAGCCAGCATCGGCGATATTGTCCG
ACGCGCCGGAAGCGTCATGGATTCCCTGAAATGTTTTTATGATATCAATGTGATCGACGACGGCTCCGAAGACCAGACCG
CGGAAATCGCCGGAGCTGCCGGGGCCTCGGTTATCCGCCACCCTTACACGATAGGGAACGGCGCCGCCGTCAAAACGGGC
ATCCGCCACGCCCGGGGAAACATTCTGGTCATGCTCGACGGGGACGGCCAGCACTCCCCGGAAGACATCCCCCGCCTGCT
GGAAATGATGAATACCTTCGATATGGCAGTGGGCGCCCGGAACCATCAGTCAGCTACTTACCTGCACCGCGATATCGCCA
ACGCCGTTTACAACCGGTTTGCCTCCTATATCTGCAAGCGGAAAATTGATGACCTGACCTCCGGTTTCCGCGCCATCAAA
GCGATCATTGCCCGGGAATTCGTCTCAATGCTGCCCAACACCTTTTCCTATCCGACCACGCTGACCCTGGCCGTTGTCCG
TTCCGGCTACAGCCTCACTTATGTCCCCATCGCCACTTCCCGGCGCATCGGAAAAAGCAAGATTCATCTTCTCCGGGACG
GCGCCCGCTTCCTCCTGATTCTCCTGAAAATTTCCACCCTCTTCTCCCCCATGCGGGTCTTTCTGCCGGTTAGTTTTCTT
ATGTTTGCGGCAGGACTGGGATACGGTCTTTTCCGGATCTGCACCCTGAATGACAGCTATGGGCCCACCTCCGCCATGCT
GATGACCATGTCCGTCGTCGTCTTTATGGTCGGCCTGGTCTCGGAGCAGGTGGCCCAGCTCCGGTACGAACGGACGAATC
AGCAATACGCTGCATCATGGAATAAGGATACTGAAAAGGAAGAATAA

Upstream 100 bases:

>100_bases
ACTAACAATACCCAGGAACAGACCGTTGTATTGGTCATTGCCGCTTATCCGCGGTGAACATTGTGGCTGACATGGGCATC
CGATCCCTGAAATTTTTCCT

Downstream 100 bases:

>100_bases
AATGAGTATGCACGGTACGATCACCGACCTTATTGAAACCATCACCCACGAACTGGAGCCTCTGGCTTTGATCATTCGGG
CAGACTACGACGAACCGGGC

Product: cell wall biogenesis glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MKSFLRPDISIIIPAHNEAASIGDIVRRAGSVMDSLKCFYDINVIDDGSEDQTAEIAGAAGASVIRHPYTIGNGAAVKTG
IRHARGNILVMLDGDGQHSPEDIPRLLEMMNTFDMAVGARNHQSATYLHRDIANAVYNRFASYICKRKIDDLTSGFRAIK
AIIAREFVSMLPNTFSYPTTLTLAVVRSGYSLTYVPIATSRRIGKSKIHLLRDGARFLLILLKISTLFSPMRVFLPVSFL
MFAAGLGYGLFRICTLNDSYGPTSAMLMTMSVVVFMVGLVSEQVAQLRYERTNQQYAASWNKDTEKEE

Sequences:

>Translated_308_residues
MKSFLRPDISIIIPAHNEAASIGDIVRRAGSVMDSLKCFYDINVIDDGSEDQTAEIAGAAGASVIRHPYTIGNGAAVKTG
IRHARGNILVMLDGDGQHSPEDIPRLLEMMNTFDMAVGARNHQSATYLHRDIANAVYNRFASYICKRKIDDLTSGFRAIK
AIIAREFVSMLPNTFSYPTTLTLAVVRSGYSLTYVPIATSRRIGKSKIHLLRDGARFLLILLKISTLFSPMRVFLPVSFL
MFAAGLGYGLFRICTLNDSYGPTSAMLMTMSVVVFMVGLVSEQVAQLRYERTNQQYAASWNKDTEKEE
>Mature_308_residues
MKSFLRPDISIIIPAHNEAASIGDIVRRAGSVMDSLKCFYDINVIDDGSEDQTAEIAGAAGASVIRHPYTIGNGAAVKTG
IRHARGNILVMLDGDGQHSPEDIPRLLEMMNTFDMAVGARNHQSATYLHRDIANAVYNRFASYICKRKIDDLTSGFRAIK
AIIAREFVSMLPNTFSYPTTLTLAVVRSGYSLTYVPIATSRRIGKSKIHLLRDGARFLLILLKISTLFSPMRVFLPVSFL
MFAAGLGYGLFRICTLNDSYGPTSAMLMTMSVVVFMVGLVSEQVAQLRYERTNQQYAASWNKDTEKEE

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4503363, Length=235, Percent_Identity=24.2553191489362, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI1788588, Length=184, Percent_Identity=27.7173913043478, Blast_Score=81, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71999402, Length=233, Percent_Identity=24.8927038626609, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24585265, Length=214, Percent_Identity=26.1682242990654, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 34063; Mature: 34063

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSFLRPDISIIIPAHNEAASIGDIVRRAGSVMDSLKCFYDINVIDDGSEDQTAEIAGAA
CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHC
GASVIRHPYTIGNGAAVKTGIRHARGNILVMLDGDGQHSPEDIPRLLEMMNTFDMAVGAR
CHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCC
NHQSATYLHRDIANAVYNRFASYICKRKIDDLTSGFRAIKAIIAREFVSMLPNTFSYPTT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
LTLAVVRSGYSLTYVPIATSRRIGKSKIHLLRDGARFLLILLKISTLFSPMRVFLPVSFL
HHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MFAAGLGYGLFRICTLNDSYGPTSAMLMTMSVVVFMVGLVSEQVAQLRYERTNQQYAASW
HHHHHHCHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
NKDTEKEE
CCCCCCCC
>Mature Secondary Structure
MKSFLRPDISIIIPAHNEAASIGDIVRRAGSVMDSLKCFYDINVIDDGSEDQTAEIAGAA
CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHC
GASVIRHPYTIGNGAAVKTGIRHARGNILVMLDGDGQHSPEDIPRLLEMMNTFDMAVGAR
CHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCC
NHQSATYLHRDIANAVYNRFASYICKRKIDDLTSGFRAIKAIIAREFVSMLPNTFSYPTT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
LTLAVVRSGYSLTYVPIATSRRIGKSKIHLLRDGARFLLILLKISTLFSPMRVFLPVSFL
HHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MFAAGLGYGLFRICTLNDSYGPTSAMLMTMSVVVFMVGLVSEQVAQLRYERTNQQYAASW
HHHHHHCHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
NKDTEKEE
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]