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The map label for this gene is secF

Identifier: 85860050

GI number: 85860050

Start: 2261802

End: 2262710

Strand: Direct

Name: secF

Synonym: SYN_01525

Alternate gene names: 85860050

Gene position: 2261802-2262710 (Clockwise)

Preceding gene: 85860049

Following gene: 85860051

Centisome position: 71.14

GC content: 47.85

Gene sequence:

>909_bases
ATGGAAATCATTAAATCGGAAACCCACTTTAATTTTGTCGCCATGATGAAAATGGCGGTTACAATCTCGATTGTTTACAT
CCTGATCGGTATTGCCTCCATCTTCTGGCATGGCGGCCTCAATTTTGGAATCGATTTTGCGGGAGGAACACTCATTCAGA
TCCGGTTCGACCAGGAAACATCGGTGGAAAAGCTCAGACAGACACTCGAACCCATCGGCATGGAGAACAGCATTATCCAA
CAGTTCGGTCCAAATGAAATGGTGGTCAGAACCGCAGCCTCCAGTATGGATCTCAAAGGATTGTCAGGACAGATTGAAAA
CGCCCTCCAGACAACCTATGGTCAGAAGGCCTTTGAAATTCGAAGGGTTGAATCCGTCGGCCCCAAAGTCGGAAGCGACC
TGACTCGAAAAGCGCTGCTGGCTATCATTTTTTCCTGGATCGGAATCCTCGTTTATGTGGGATTTCGTTTCGAGCTCCGC
TATGCCTTTGGCGGGATCATCGCTCTTGTTCACGATGTTCTGGTTACCGTGGGAACCCTGTCCCTTCTGAACAAGGAATT
CGATCTGATCATCGTTGCCGCGCTGCTCACGATCATCGGTTACTCCATCAACGACACGATCGTCATTTTTGACCGTATCC
GTGAAAATACCCGAAAAAACATGAAAATGCCGCTTATGGATGTCATCAATTTGAGCGTGAACCAGACCCTCAGTCGAACT
CTTCTTACTTCTTTCACTGTCATCCTGGTTCTTCTGGCTCTTTTCTTTTTCGGCGGCCCCGTTATCCATGATTTCGCCTT
TACCCTGCTGGTCGGTTGCATCGCGGGTGTTTACTCGACCGTTTTTATTGCCAGTCCCATTGTGCTGGCCTTTGAAAAAA
TCCGGCCTTCCCGGATAAAAAGGAATTAA

Upstream 100 bases:

>100_bases
TCACAAGGATTATTTTTGATTACTTCGTCTGGAACCGCAGGATCAAGTCCATCAGCATATAAAAGAGGGAACTGCAATTT
GATACGTCGAGGAGATCTTC

Downstream 100 bases:

>100_bases
CAAGTTTGCCCCCTCTCGGCATCGTCGGATTGACTTTTTTCATTATCGTCCTTTTTATTGGCGTATATGCAACAGTCTTC
GCCCTGCCGGGAACGGTTCT

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MEIIKSETHFNFVAMMKMAVTISIVYILIGIASIFWHGGLNFGIDFAGGTLIQIRFDQETSVEKLRQTLEPIGMENSIIQ
QFGPNEMVVRTAASSMDLKGLSGQIENALQTTYGQKAFEIRRVESVGPKVGSDLTRKALLAIIFSWIGILVYVGFRFELR
YAFGGIIALVHDVLVTVGTLSLLNKEFDLIIVAALLTIIGYSINDTIVIFDRIRENTRKNMKMPLMDVINLSVNQTLSRT
LLTSFTVILVLLALFFFGGPVIHDFAFTLLVGCIAGVYSTVFIASPIVLAFEKIRPSRIKRN

Sequences:

>Translated_302_residues
MEIIKSETHFNFVAMMKMAVTISIVYILIGIASIFWHGGLNFGIDFAGGTLIQIRFDQETSVEKLRQTLEPIGMENSIIQ
QFGPNEMVVRTAASSMDLKGLSGQIENALQTTYGQKAFEIRRVESVGPKVGSDLTRKALLAIIFSWIGILVYVGFRFELR
YAFGGIIALVHDVLVTVGTLSLLNKEFDLIIVAALLTIIGYSINDTIVIFDRIRENTRKNMKMPLMDVINLSVNQTLSRT
LLTSFTVILVLLALFFFGGPVIHDFAFTLLVGCIAGVYSTVFIASPIVLAFEKIRPSRIKRN
>Mature_302_residues
MEIIKSETHFNFVAMMKMAVTISIVYILIGIASIFWHGGLNFGIDFAGGTLIQIRFDQETSVEKLRQTLEPIGMENSIIQ
QFGPNEMVVRTAASSMDLKGLSGQIENALQTTYGQKAFEIRRVESVGPKVGSDLTRKALLAIIFSWIGILVYVGFRFELR
YAFGGIIALVHDVLVTVGTLSLLNKEFDLIIVAALLTIIGYSINDTIVIFDRIRENTRKNMKMPLMDVINLSVNQTLSRT
LLTSFTVILVLLALFFFGGPVIHDFAFTLLVGCIAGVYSTVFIASPIVLAFEKIRPSRIKRN

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=267, Percent_Identity=41.1985018726592, Blast_Score=217, Evalue=7e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 33564; Mature: 33564

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIIKSETHFNFVAMMKMAVTISIVYILIGIASIFWHGGLNFGIDFAGGTLIQIRFDQET
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEEECCCH
SVEKLRQTLEPIGMENSIIQQFGPNEMVVRTAASSMDLKGLSGQIENALQTTYGQKAFEI
HHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHH
RRVESVGPKVGSDLTRKALLAIIFSWIGILVYVGFRFELRYAFGGIIALVHDVLVTVGTL
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHH
SLLNKEFDLIIVAALLTIIGYSINDTIVIFDRIRENTRKNMKMPLMDVINLSVNQTLSRT
HHHCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LLTSFTVILVLLALFFFGGPVIHDFAFTLLVGCIAGVYSTVFIASPIVLAFEKIRPSRIK
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCC
RN
CC
>Mature Secondary Structure
MEIIKSETHFNFVAMMKMAVTISIVYILIGIASIFWHGGLNFGIDFAGGTLIQIRFDQET
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEEECCCH
SVEKLRQTLEPIGMENSIIQQFGPNEMVVRTAASSMDLKGLSGQIENALQTTYGQKAFEI
HHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHH
RRVESVGPKVGSDLTRKALLAIIFSWIGILVYVGFRFELRYAFGGIIALVHDVLVTVGTL
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHH
SLLNKEFDLIIVAALLTIIGYSINDTIVIFDRIRENTRKNMKMPLMDVINLSVNQTLSRT
HHHCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LLTSFTVILVLLALFFFGGPVIHDFAFTLLVGCIAGVYSTVFIASPIVLAFEKIRPSRIK
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCC
RN
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA