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The map label for this gene is yajC [C]

Identifier: 85860048

GI number: 85860048

Start: 2259805

End: 2260143

Strand: Direct

Name: yajC [C]

Synonym: SYN_01523

Alternate gene names: 85860048

Gene position: 2259805-2260143 (Clockwise)

Preceding gene: 85860047

Following gene: 85860049

Centisome position: 71.08

GC content: 51.33

Gene sequence:

>339_bases
TTGAAGGAGGATAACGCATTGACAGACTTAGCTTATGCCATGGGAAGCGCTCCCGGAGGAGCGGCAGGGGGAGATGTCTC
TTTTCTGATCATGATGGCCGTGATCTTCTGCATTTTTTATTTCCTGCTGATCAGGCCGCAGCAGAAAAAGCAGAAAGAAC
TCAAAGAAATGCTGGCGAATCTGAATCACGGCGATGTGGTGATGACCTCGGGAGGCATCCACGGAAAGATTGCTGCCCTG
ACCGGCGACGTCGTTACTCTTGAAGTGGCCGATAAAGTGCGCGTCAAGGTTTCAAGGGGCTTTATCGCGGCTGTTCTTGA
GAAAGCCGGCAAGGAATAA

Upstream 100 bases:

>100_bases
GTCAATACGCGGCTTTTAAAACCCGGTTTCTAAAAGACCGTCGAATGTCGGAAGCCTGACTCCTGATCAGGGTATATTCA
TAATGTCATAATGGACACGA

Downstream 100 bases:

>100_bases
GTCTGAAAGGGGAAGTCTATGTTCGGAAGCATAAGAGTGCGGGCTTTCATCGCCCTTGCCGTTATCCTGGTCGCTGTCTT
CTATCTGTTTCCTACGCTGA

Product: protein translocase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MKEDNALTDLAYAMGSAPGGAAGGDVSFLIMMAVIFCIFYFLLIRPQQKKQKELKEMLANLNHGDVVMTSGGIHGKIAAL
TGDVVTLEVADKVRVKVSRGFIAAVLEKAGKE

Sequences:

>Translated_112_residues
MKEDNALTDLAYAMGSAPGGAAGGDVSFLIMMAVIFCIFYFLLIRPQQKKQKELKEMLANLNHGDVVMTSGGIHGKIAAL
TGDVVTLEVADKVRVKVSRGFIAAVLEKAGKE
>Mature_112_residues
MKEDNALTDLAYAMGSAPGGAAGGDVSFLIMMAVIFCIFYFLLIRPQQKKQKELKEMLANLNHGDVVMTSGGIHGKIAAL
TGDVVTLEVADKVRVKVSRGFIAAVLEKAGKE

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=95, Percent_Identity=38.9473684210526, Blast_Score=72, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 11941; Mature: 11941

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEDNALTDLAYAMGSAPGGAAGGDVSFLIMMAVIFCIFYFLLIRPQQKKQKELKEMLAN
CCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
LNHGDVVMTSGGIHGKIAALTGDVVTLEVADKVRVKVSRGFIAAVLEKAGKE
CCCCCEEEECCCCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKEDNALTDLAYAMGSAPGGAAGGDVSFLIMMAVIFCIFYFLLIRPQQKKQKELKEMLAN
CCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
LNHGDVVMTSGGIHGKIAALTGDVVTLEVADKVRVKVSRGFIAAVLEKAGKE
CCCCCEEEECCCCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]