| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
Click here to switch to the map view.
The map label for this gene is 85859945
Identifier: 85859945
GI number: 85859945
Start: 2174289
End: 2174669
Strand: Direct
Name: 85859945
Synonym: SYN_03099
Alternate gene names: NA
Gene position: 2174289-2174669 (Clockwise)
Preceding gene: 85859944
Following gene: 85859946
Centisome position: 68.39
GC content: 54.86
Gene sequence:
>381_bases ATGCCTACGACACTTTGGCACGGCAAATGCCATGACAAGATCAAGGAAGTAAAAACAAAAATCGACAGGAGGCATGGAAT CATGAAAAAATTGACAACGCTGTTCATTACGGCCCTCATGGTGACAGGATTGACGACATCCGCTTTCGCCGTTGGTCCTG CCGGAAACGAGCGTGGACGGGATGACCGCGAAAGCTACCGGAGTGAAACTGTCCGAGGTGGCTTTCAGGGCCGATACGAG CGAGGAAGAAATGTTCATCATGGCAGGCATGTATACAACCGGGCGCAGCATAGCGGATACGGACGCGGCTGGGGACATCA TGACAGGTATGGACACGGGTGGGGGAATCACGGCGGATTCGGGCACGGCTGGGGCCGATAG
Upstream 100 bases:
>100_bases AGATGGATACTTGATATGCACTCTCCAGCCTGGCGCAAGAAAAATGAGCATCAACAGCCGTGATGACTAAAATATAGAAT AATAATATCAACATGTTACA
Downstream 100 bases:
>100_bases GTCAGGCTCATGCCTCGATGACCGGAAACGATCTCAACCTGTTCTCTGATGCCGCCGGCCGCAATCAACCCATCGTATCC GTCCACCAGAATGAGATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MPTTLWHGKCHDKIKEVKTKIDRRHGIMKKLTTLFITALMVTGLTTSAFAVGPAGNERGRDDRESYRSETVRGGFQGRYE RGRNVHHGRHVYNRAQHSGYGRGWGHHDRYGHGWGNHGGFGHGWGR
Sequences:
>Translated_126_residues MPTTLWHGKCHDKIKEVKTKIDRRHGIMKKLTTLFITALMVTGLTTSAFAVGPAGNERGRDDRESYRSETVRGGFQGRYE RGRNVHHGRHVYNRAQHSGYGRGWGHHDRYGHGWGNHGGFGHGWGR >Mature_125_residues PTTLWHGKCHDKIKEVKTKIDRRHGIMKKLTTLFITALMVTGLTTSAFAVGPAGNERGRDDRESYRSETVRGGFQGRYER GRNVHHGRHVYNRAQHSGYGRGWGHHDRYGHGWGNHGGFGHGWGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14318; Mature: 14187
Theoretical pI: Translated: 11.14; Mature: 11.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTTLWHGKCHDKIKEVKTKIDRRHGIMKKLTTLFITALMVTGLTTSAFAVGPAGNERGR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCCCCCCCC DDRESYRSETVRGGFQGRYERGRNVHHGRHVYNRAQHSGYGRGWGHHDRYGHGWGNHGGF HHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC GHGWGR CCCCCC >Mature Secondary Structure PTTLWHGKCHDKIKEVKTKIDRRHGIMKKLTTLFITALMVTGLTTSAFAVGPAGNERGR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCCCCCCCC DDRESYRSETVRGGFQGRYERGRNVHHGRHVYNRAQHSGYGRGWGHHDRYGHGWGNHGGF HHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC GHGWGR CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA