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The map label for this gene is 85859932

Identifier: 85859932

GI number: 85859932

Start: 2165995

End: 2167194

Strand: Direct

Name: 85859932

Synonym: SYN_00677

Alternate gene names: NA

Gene position: 2165995-2167194 (Clockwise)

Preceding gene: 85859930

Following gene: 85859933

Centisome position: 68.13

GC content: 54.83

Gene sequence:

>1200_bases
ATGACACTCGTTAAATTCTTATCCGCGGCACTGATTCTCCTTTTCCTGAACACGACCGCCGTATTCGCCCAAGGCGCCGG
TTATGAATGGGACATTCTCAACAAGGAAGTCATGAAACTCTACCGTATGGGAAACCTGGACCGCGCGGTCAAGGTCGCGA
AGAAAGCGCTTGAAGTAGCCAGGGAAAATGTCGGACCGGATCATACCGATGTGGCCACGAGTCTGAACAATCTCGCAGAA
CTCTACCGTACCCAGGGCCAGTATGCCCATGCAGAACCGTTGTTGAAGAGATCGCTGGCGATCATGGAGGAAGCCCGGGG
ACCGGATCATACCGATGTGGCCACGAGCCTGAACAATCTCGCCCTGCTCTATTATGCCCAGGACCAGTACACCGAAGCAG
AACCTCTGTATAAAAGATCACTGACGATCATGGAGAAGGCCCTCGGTCCGGATCATACCGATGTAGCCACGAGCCTGAAC
AATCTCGCCCTGCTCTATTATGCCCAGGGTCAATTCAATCAGGCCGAACCCCTCTACAGGAGGGCGCTGGAGATCAGGGA
AAAGGCACTGGGTTCGAATCACTCAGCCGTGGCCGTAAGCATGAACAACCTCGCAGGCCTTTATCATGCCCAGGGCCAAT
ACGCGCAGGCGGAACCCCTCTACAAGAGGGCACTGGAGATCATGGAGGAAGCTCGAGACCCTGATTCTATCGAGTTGGCA
ACGAGCCTCAGCAACCTTGCTTTTTTCTATGTCGCCCAAGGCCAGTACAAGCAGGCTGAACCCTTCTACAAGAGGGAACT
GGAGATCAGGGAAAAGGCACTGGGTCCGAATCATCCCGATGTGGCCACGAGCCTGAACAATCTCGCAGAGCTCTACCGTA
CCCAGGGCCGGTACACTCAGGCTGAGTTCCTCTTCAAGAGGTCTCTGGCGATCAGAGAAAAGGCCCTCGCCCCGAATCAT
ACCGCTGTAGCCACAAGTCTGAATAACCTCGCATTGCTCTACTATGCCCGAGGCCAGTATGCTCAGGCGGAACCCCTTTA
CAAAAGGGCACTGGAGATTATGGAGAAGGCCCTGACCCCGGATCATCCTTCCGTGGCCACAATAATTGAAAATCTGGTCA
AACTCTACAGGGCCACCAGTCGGTTCAAGGAGGCCGGCAGGCTCGAACAGCGCGCGGCCGCTATTCGGTCTGTCATATGA

Upstream 100 bases:

>100_bases
AAAAAAGACGGGGGCTATTCACCAACTCTTCAGTTTTTAAAGCGTTTTACAAAAGATCTTCATCAGCATTTTCAGTCGTA
AGTCGGCGAGGAAGGAACTG

Downstream 100 bases:

>100_bases
TGGACGATTAACCGACTCCCTGCCGGCAATTGATGTCTGCATGTTGGAAATTTTTTCATGCTTCAGCGTATTTATGCATT
GTTCGATAAAAGTTCCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide Repeat Family; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Family Protein; Kinesin Light Chain; NB-ARC Domain-Containing Protein; NB-ARC Domain Protein; Serine/Threonine Protein Kinase; Tetratricopeptide Domain-Containing Protein; Serine/Threonine Kinase Family Protein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Tpr_1 Repeat-Containing Protein; Nb-Arc; TPR Domain-Containing Protein; Tetratricopeptide Protein; SEFIR Domain Protein; TPR Domain Family Protein; SEC-C Motif Domain Protein; Tetratricopeptide TPR2 Protein; Serine/Threonine Protein Kinase With TPR Repeats; Ankyrin Repeat Domain Protein; Tetratricopeptide Tpr_3 Repeat-Containing Protein; Tetratricopeptide Repeat-Containing Protein; TPR Repeat-Containing Serine/Threonin Protein Kinase; Protein Kinase; Sel1 Domain-Containing Protein; Ankyrin And Tpr Repeat Domain Protein; Peptidase-Like

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MTLVKFLSAALILLFLNTTAVFAQGAGYEWDILNKEVMKLYRMGNLDRAVKVAKKALEVARENVGPDHTDVATSLNNLAE
LYRTQGQYAHAEPLLKRSLAIMEEARGPDHTDVATSLNNLALLYYAQDQYTEAEPLYKRSLTIMEKALGPDHTDVATSLN
NLALLYYAQGQFNQAEPLYRRALEIREKALGSNHSAVAVSMNNLAGLYHAQGQYAQAEPLYKRALEIMEEARDPDSIELA
TSLSNLAFFYVAQGQYKQAEPFYKRELEIREKALGPNHPDVATSLNNLAELYRTQGRYTQAEFLFKRSLAIREKALAPNH
TAVATSLNNLALLYYARGQYAQAEPLYKRALEIMEKALTPDHPSVATIIENLVKLYRATSRFKEAGRLEQRAAAIRSVI

Sequences:

>Translated_399_residues
MTLVKFLSAALILLFLNTTAVFAQGAGYEWDILNKEVMKLYRMGNLDRAVKVAKKALEVARENVGPDHTDVATSLNNLAE
LYRTQGQYAHAEPLLKRSLAIMEEARGPDHTDVATSLNNLALLYYAQDQYTEAEPLYKRSLTIMEKALGPDHTDVATSLN
NLALLYYAQGQFNQAEPLYRRALEIREKALGSNHSAVAVSMNNLAGLYHAQGQYAQAEPLYKRALEIMEEARDPDSIELA
TSLSNLAFFYVAQGQYKQAEPFYKRELEIREKALGPNHPDVATSLNNLAELYRTQGRYTQAEFLFKRSLAIREKALAPNH
TAVATSLNNLALLYYARGQYAQAEPLYKRALEIMEKALTPDHPSVATIIENLVKLYRATSRFKEAGRLEQRAAAIRSVI
>Mature_398_residues
TLVKFLSAALILLFLNTTAVFAQGAGYEWDILNKEVMKLYRMGNLDRAVKVAKKALEVARENVGPDHTDVATSLNNLAEL
YRTQGQYAHAEPLLKRSLAIMEEARGPDHTDVATSLNNLALLYYAQDQYTEAEPLYKRSLTIMEKALGPDHTDVATSLNN
LALLYYAQGQFNQAEPLYRRALEIREKALGSNHSAVAVSMNNLAGLYHAQGQYAQAEPLYKRALEIMEEARDPDSIELAT
SLSNLAFFYVAQGQYKQAEPFYKRELEIREKALGPNHPDVATSLNNLAELYRTQGRYTQAEFLFKRSLAIREKALAPNHT
AVATSLNNLALLYYARGQYAQAEPLYKRALEIMEKALTPDHPSVATIIENLVKLYRATSRFKEAGRLEQRAAAIRSVI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI34304360, Length=340, Percent_Identity=39.4117647058824, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI33620730, Length=298, Percent_Identity=40.9395973154362, Blast_Score=187, Evalue=1e-47,
Organism=Homo sapiens, GI194306559, Length=298, Percent_Identity=40.9395973154362, Blast_Score=187, Evalue=1e-47,
Organism=Homo sapiens, GI110735431, Length=298, Percent_Identity=40.9395973154362, Blast_Score=187, Evalue=1e-47,
Organism=Homo sapiens, GI41871955, Length=295, Percent_Identity=41.0169491525424, Blast_Score=181, Evalue=7e-46,
Organism=Homo sapiens, GI41871946, Length=295, Percent_Identity=41.0169491525424, Blast_Score=181, Evalue=7e-46,
Organism=Homo sapiens, GI41871960, Length=295, Percent_Identity=41.0169491525424, Blast_Score=181, Evalue=8e-46,
Organism=Homo sapiens, GI198041734, Length=286, Percent_Identity=39.8601398601399, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI198041731, Length=286, Percent_Identity=39.8601398601399, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI12383062, Length=286, Percent_Identity=39.8601398601399, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI198041728, Length=286, Percent_Identity=39.8601398601399, Blast_Score=170, Evalue=2e-42,
Organism=Homo sapiens, GI91825557, Length=191, Percent_Identity=47.1204188481675, Blast_Score=160, Evalue=2e-39,
Organism=Homo sapiens, GI19923891, Length=83, Percent_Identity=48.1927710843374, Blast_Score=79, Evalue=8e-15,
Organism=Homo sapiens, GI18104962, Length=273, Percent_Identity=24.5421245421245, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI224028289, Length=314, Percent_Identity=25.1592356687898, Blast_Score=66, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI71984517, Length=295, Percent_Identity=42.0338983050847, Blast_Score=192, Evalue=3e-49,
Organism=Caenorhabditis elegans, GI71984524, Length=295, Percent_Identity=42.0338983050847, Blast_Score=191, Evalue=4e-49,
Organism=Caenorhabditis elegans, GI71984527, Length=295, Percent_Identity=42.0338983050847, Blast_Score=191, Evalue=5e-49,
Organism=Caenorhabditis elegans, GI71984535, Length=281, Percent_Identity=42.7046263345196, Blast_Score=191, Evalue=5e-49,
Organism=Caenorhabditis elegans, GI17541458, Length=386, Percent_Identity=30.0518134715026, Blast_Score=139, Evalue=2e-33,
Organism=Drosophila melanogaster, GI17647555, Length=285, Percent_Identity=41.0526315789474, Blast_Score=179, Evalue=2e-45,
Organism=Drosophila melanogaster, GI18857963, Length=264, Percent_Identity=22.3484848484848, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44764; Mature: 44632

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLVKFLSAALILLFLNTTAVFAQGAGYEWDILNKEVMKLYRMGNLDRAVKVAKKALEVA
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
RENVGPDHTDVATSLNNLAELYRTQGQYAHAEPLLKRSLAIMEEARGPDHTDVATSLNNL
HHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCE
ALLYYAQDQYTEAEPLYKRSLTIMEKALGPDHTDVATSLNNLALLYYAQGQFNQAEPLYR
EEEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEEEEECCCCCCCCHHHH
RALEIREKALGSNHSAVAVSMNNLAGLYHAQGQYAQAEPLYKRALEIMEEARDPDSIELA
HHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHH
TSLSNLAFFYVAQGQYKQAEPFYKRELEIREKALGPNHPDVATSLNNLAELYRTQGRYTQ
HHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHH
AEFLFKRSLAIREKALAPNHTAVATSLNNLALLYYARGQYAQAEPLYKRALEIMEKALTP
HHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCC
DHPSVATIIENLVKLYRATSRFKEAGRLEQRAAAIRSVI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TLVKFLSAALILLFLNTTAVFAQGAGYEWDILNKEVMKLYRMGNLDRAVKVAKKALEVA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
RENVGPDHTDVATSLNNLAELYRTQGQYAHAEPLLKRSLAIMEEARGPDHTDVATSLNNL
HHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCE
ALLYYAQDQYTEAEPLYKRSLTIMEKALGPDHTDVATSLNNLALLYYAQGQFNQAEPLYR
EEEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEEEEECCCCCCCCHHHH
RALEIREKALGSNHSAVAVSMNNLAGLYHAQGQYAQAEPLYKRALEIMEEARDPDSIELA
HHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHH
TSLSNLAFFYVAQGQYKQAEPFYKRELEIREKALGPNHPDVATSLNNLAELYRTQGRYTQ
HHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHH
AEFLFKRSLAIREKALAPNHTAVATSLNNLALLYYARGQYAQAEPLYKRALEIMEKALTP
HHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCC
DHPSVATIIENLVKLYRATSRFKEAGRLEQRAAAIRSVI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA