| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is yjhP [H]
Identifier: 85859848
GI number: 85859848
Start: 2081132
End: 2081899
Strand: Direct
Name: yjhP [H]
Synonym: SYN_00463
Alternate gene names: 85859848
Gene position: 2081132-2081899 (Clockwise)
Preceding gene: 85859847
Following gene: 85859849
Centisome position: 65.46
GC content: 52.21
Gene sequence:
>768_bases ATGGACATGTGGAAGTTCTTTGACATCACTCATCGTGAGCACATCCTCTGCAATCCGATGAGTCTTGAGAAATTGGATCA GCTGATTACGCTTCTGCGTCTGAAACCTGGCGCACGCGTGCTTGAAATCGCCACCGGAAAGGGCGAATTTATTATCAGGC TTGCAGAACGATATCGGCAAATGACAGGAACAGGGATTGATTTCTCTCCTTACTGCATTGCAGAAGTCCGCAAAAAGCAC CAGACACGTGTTCCGGATGCCCAACTCTCCTTCCTGGAGATGGATGGGGCCGAGTATCTCCCGGAAACCCTGGAGAGCTT TGATCTGGTAGCCTGCATCGGTGCAAGTTGGATTTATGGCGGGCATCGAGGGACGTTGAACGCGCTATACAGGATGGCAA CCCCGGAAAGTTGGATCGTTGTGGGAGAACCGTACTGGCGTCATGAACCGGAAGGAGAGTATTTACAAGCGATCGGAGTG ACACGGAGCGACTTCGGAACGCATTATCAGAATGTAGAGGTCGGGCGAGAGCACGGATTGGAGGCGGTCTACACACTCGT AAGCAGCCAGGATGACTGGGATAAGTATGAGGGGCTCCAATGGTATGCTGCAGAAACCTGGGCAAGTGACCATCAGAACG ATCCCGATGTGGAGACTGTGCTGAAGCGCGTGCGTGAGAACAAGACAGCGTATTTGAGGTGGGGAAGAGAAACGTTGGGA TGGGCGATTTATGTGTTCAGGAAAGGAGGATACGGGGGAAGCAAGTAG
Upstream 100 bases:
>100_bases ATCGTGAGCATTTTAAACAGAAGCCAAACACGAAAATTTTACCAGTAAAGCAAACGAGATATAAAGAAGTTAGATCAACA TTGACAGAGGGGGTACACCT
Downstream 100 bases:
>100_bases AAACCATATCCCCTTGAAGGAAAAGGAACAACGAACTCAGCCAGAAAGAGTGTCAAAAATGGACAAGGAATTTCATTACC ACATCACCGGCATCATAGCC
Product: methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MDMWKFFDITHREHILCNPMSLEKLDQLITLLRLKPGARVLEIATGKGEFIIRLAERYRQMTGTGIDFSPYCIAEVRKKH QTRVPDAQLSFLEMDGAEYLPETLESFDLVACIGASWIYGGHRGTLNALYRMATPESWIVVGEPYWRHEPEGEYLQAIGV TRSDFGTHYQNVEVGREHGLEAVYTLVSSQDDWDKYEGLQWYAAETWASDHQNDPDVETVLKRVRENKTAYLRWGRETLG WAIYVFRKGGYGGSK
Sequences:
>Translated_255_residues MDMWKFFDITHREHILCNPMSLEKLDQLITLLRLKPGARVLEIATGKGEFIIRLAERYRQMTGTGIDFSPYCIAEVRKKH QTRVPDAQLSFLEMDGAEYLPETLESFDLVACIGASWIYGGHRGTLNALYRMATPESWIVVGEPYWRHEPEGEYLQAIGV TRSDFGTHYQNVEVGREHGLEAVYTLVSSQDDWDKYEGLQWYAAETWASDHQNDPDVETVLKRVRENKTAYLRWGRETLG WAIYVFRKGGYGGSK >Mature_255_residues MDMWKFFDITHREHILCNPMSLEKLDQLITLLRLKPGARVLEIATGKGEFIIRLAERYRQMTGTGIDFSPYCIAEVRKKH QTRVPDAQLSFLEMDGAEYLPETLESFDLVACIGASWIYGGHRGTLNALYRMATPESWIVVGEPYWRHEPEGEYLQAIGV TRSDFGTHYQNVEVGREHGLEAVYTLVSSQDDWDKYEGLQWYAAETWASDHQNDPDVETVLKRVRENKTAYLRWGRETLG WAIYVFRKGGYGGSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790760, Length=248, Percent_Identity=32.6612903225806, Blast_Score=141, Evalue=3e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 - InterPro: IPR017031 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 29407; Mature: 29407
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMWKFFDITHREHILCNPMSLEKLDQLITLLRLKPGARVLEIATGKGEFIIRLAERYRQ CCCHHHCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHH MTGTGIDFSPYCIAEVRKKHQTRVPDAQLSFLEMDGAEYLPETLESFDLVACIGASWIYG HHCCCCCCCCHHHHHHHHHHHCCCCCHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHEEC GHRGTLNALYRMATPESWIVVGEPYWRHEPEGEYLQAIGVTRSDFGTHYQNVEVGREHGL CCCHHHHHHHHHCCCCCEEEECCCHHCCCCCCCHHHHHCCCHHHCCCCCCCCHHHHHHCH EAVYTLVSSQDDWDKYEGLQWYAAETWASDHQNDPDVETVLKRVRENKTAYLRWGRETLG HHHHHHHCCCCCHHHHCCEEEEEHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEECCHHHC WAIYVFRKGGYGGSK EEEEEEEECCCCCCC >Mature Secondary Structure MDMWKFFDITHREHILCNPMSLEKLDQLITLLRLKPGARVLEIATGKGEFIIRLAERYRQ CCCHHHCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHH MTGTGIDFSPYCIAEVRKKHQTRVPDAQLSFLEMDGAEYLPETLESFDLVACIGASWIYG HHCCCCCCCCHHHHHHHHHHHCCCCCHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHEEC GHRGTLNALYRMATPESWIVVGEPYWRHEPEGEYLQAIGVTRSDFGTHYQNVEVGREHGL CCCHHHHHHHHHCCCCCEEEECCCHHCCCCCCCHHHHHCCCHHHCCCCCCCCHHHHHHCH EAVYTLVSSQDDWDKYEGLQWYAAETWASDHQNDPDVETVLKRVRENKTAYLRWGRETLG HHHHHHHCCCCCHHHHCCEEEEEHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEECCHHHC WAIYVFRKGGYGGSK EEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]