| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85859784
Identifier: 85859784
GI number: 85859784
Start: 2019925
End: 2020161
Strand: Direct
Name: 85859784
Synonym: SYN_02882
Alternate gene names: NA
Gene position: 2019925-2020161 (Clockwise)
Preceding gene: 85859774
Following gene: 85859804
Centisome position: 63.53
GC content: 37.55
Gene sequence:
>237_bases TTGGTTTGTTTGAAAAGAATCAGCCAGCTTGCCTTTTCTTTCTTTTATATCGATAACAAGGGAAGATTTCCAGAAAGGAA TGATGAAACTGACAGCAAAGAAAAAAAACGGCTTCCGTTCCTAAACATTTCCATCAGGAATTTAAGAATGGAAGCCGAAC AATACAGAATAATTCAGGCCGATCAGAAGCAAGGGAAAGAGATGTACGTTGCCGAAGCTCAACTGTTTCTTTTATAA
Upstream 100 bases:
>100_bases TTCATTGTGCACCTCCTTCTGATCCCTGCATGCGCAGGTCATGATCCGGACGCACTTTTCATCCGGGTTCACGGCCAGGC GGACTTAAATTTTTTAGAGG
Downstream 100 bases:
>100_bases ATAAGCCTGAGTCCCTCCAGGGTAAGCATATCATCGATCATTTCGATGCTCCTGGTTTCCGGCTTGACGACCTTGGCCAG CCCTCCTGTGGCAATCACCA
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 78
Protein sequence:
>78_residues MVCLKRISQLAFSFFYIDNKGRFPERNDETDSKEKKRLPFLNISIRNLRMEAEQYRIIQADQKQGKEMYVAEAQLFLL
Sequences:
>Translated_78_residues MVCLKRISQLAFSFFYIDNKGRFPERNDETDSKEKKRLPFLNISIRNLRMEAEQYRIIQADQKQGKEMYVAEAQLFLL >Mature_78_residues MVCLKRISQLAFSFFYIDNKGRFPERNDETDSKEKKRLPFLNISIRNLRMEAEQYRIIQADQKQGKEMYVAEAQLFLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9363; Mature: 9363
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVCLKRISQLAFSFFYIDNKGRFPERNDETDSKEKKRLPFLNISIRNLRMEAEQYRIIQA CHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCHHHCCCEEEEEHHHEEECHHHHEEEEC DQKQGKEMYVAEAQLFLL CCCCCCEEEEEEEEEEEC >Mature Secondary Structure MVCLKRISQLAFSFFYIDNKGRFPERNDETDSKEKKRLPFLNISIRNLRMEAEQYRIIQA CHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCHHHCCCEEEEEHHHEEECHHHHEEEEC DQKQGKEMYVAEAQLFLL CCCCCCEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA