| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is hyuA [H]
Identifier: 85859769
GI number: 85859769
Start: 2002737
End: 2004413
Strand: Direct
Name: hyuA [H]
Synonym: SYN_02869
Alternate gene names: 85859769
Gene position: 2002737-2004413 (Clockwise)
Preceding gene: 85859764
Following gene: 85859770
Centisome position: 62.99
GC content: 52.36
Gene sequence:
>1677_bases ATGATTCTCGGCATTGACGTTGGAGGAACGCATACGGACGCCGTTCTGATAGAATCCGGTCGGATTCGAAAAACGGCCAA AGTCACCACTTCTCCGGATCGCATCGTGGATTCACTATCCGGAATCGCACAAGACCTGCTGAAAGGCGAATCCCTTGAAA AAATCCAGCGCATTGTGCTCAGCACAACACTTTCCACCAACGCCATTGTACAGAACAAAGTGGATCCCGTCGGGCTTCTG GTCATCAGTGGCCCCGGTCTTTCTCCATCGCATTTTGAAATCGGAGGCAACACCCGTTTTCTGTCCGGCTATGTCAATCA TCGCGGCATAGAAACGGCACCCATTGATCCGGCTGAAGTTACCCGATTTCATGAAGAGTTCCTGCGGAAGGGATTAAAAC ATGTCGGCATTGTCGGCAAATTTTCGACCCGCAACCCGAATCAGGAACTACAGGTAGAAAAGAGCATCCACAACGGTCTT GATCATGTTTCCTTAGGCCACCGGATGTCCGGCCATCTCAATTTCCCGAGACGCGTTGCCACGACCTATCTGAATGAAGC CGTCTGGGAGCGCTATTCATCTTTTGTCCGGCAGGTCATTTCTTTTTTTCAGGGATTGGGGCTTTCCGTTCCTGTTTACA TTCTGAAAGCAGATGGCGGCACGTTTGAAATCCAACACTCCGTTGAGTTTCCGGTTTACACCATCCTGTCCGGACCTGCC GCCAGCATCATGGGCATTCTCAGCATGACGCCGGATAACAAAAATGATGCCATTGCCCTGGACATCGGCGGCACCACGAC GGACATCGCCGTTTTTGCCGATGGCGTCCCCCTTCTCGAGGCTTTCGGGGTCACAATGGAAAATCACAAGACGCTGATCC GGGGGCTTCGTTCAAAGCCTGTGGGAATCGGCGGCGACAGTATGGTATATGTCAAAGACGGTCAAATTCTCATTGGGCCC GAACGAAAAGGCCCAGCCGCTGCCTTTGACGGACCCTGCCCGACCCCTACGGATGCCATGATTTTCCTTGGCTTGACCGA CATCGGCAACCGTTCAAAGGCCGAAAAGGCCGTTCAGAGCATCGCTGAGATCATGGGGATTACGGTACAGGAAGCGGCAG AAATCATCTTTGAGAATACCTGCGAAAAAATTGCGCTCCATGTCCATTCTGTCATCGAAGAAATCAACAATCAGCCGGTC TATACCATCCATGAGCTCCTGGAAGGTAAAAAAATATCCCCCAAAATCCTTTATATTATCGGCGGGCCGGCGAAACCCAT GTCCACCCGTCTGGGGCAACTGCTGGGATGTCCTGTCTGCGTCCCTTCCTACTATGAAGTGGCCAACGCCATCGGAACCG CCCTGGCCCGAACGACCGCCGAACTGACGATTCTCGCCGATACCGAACAGGGAACAATGACCATCGGCGAGGAAGGCATC CAGGAAAAGCTTCCCTCCCGCTTTACCAGAGAAGATGCCATTGAAACCGGCAGGCGCATGCTCAGGGAAAGAGCCCTGCG CCTCGGCGCGCGGGCGGAGGATCTGGAAATTGAAGTCATTGAAGATCAGGAATTCAACATGGTCAGAGATTTCTATATGA CAGGGAAAAATATTCGCGTCAAACTGCAGGTCAAGCCCGGTCTTATTGCGGGGTTTAAAACAGGAGAATTGTCATGA
Upstream 100 bases:
>100_bases TTGAGACGGAAACATACGCCTTTTTTTTGCCTTGTCAAGACAAAAAATTACCAGTATATGAAATGAGTTATTTTTCATTA CACAGGAGCGAGGTATCCCA
Downstream 100 bases:
>100_bases AAAAAGCACGGAAAACCGGTTTGATTTTCTTCCCGGCTTTTGACTGGGCCATTTCGCCTACTCATCCGGAAAGAGAAGAA CGCCTGCTCTATACCCAGGA
Product: hydantoinase/oxoprolinase family protein
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 558; Mature: 558
Protein sequence:
>558_residues MILGIDVGGTHTDAVLIESGRIRKTAKVTTSPDRIVDSLSGIAQDLLKGESLEKIQRIVLSTTLSTNAIVQNKVDPVGLL VISGPGLSPSHFEIGGNTRFLSGYVNHRGIETAPIDPAEVTRFHEEFLRKGLKHVGIVGKFSTRNPNQELQVEKSIHNGL DHVSLGHRMSGHLNFPRRVATTYLNEAVWERYSSFVRQVISFFQGLGLSVPVYILKADGGTFEIQHSVEFPVYTILSGPA ASIMGILSMTPDNKNDAIALDIGGTTTDIAVFADGVPLLEAFGVTMENHKTLIRGLRSKPVGIGGDSMVYVKDGQILIGP ERKGPAAAFDGPCPTPTDAMIFLGLTDIGNRSKAEKAVQSIAEIMGITVQEAAEIIFENTCEKIALHVHSVIEEINNQPV YTIHELLEGKKISPKILYIIGGPAKPMSTRLGQLLGCPVCVPSYYEVANAIGTALARTTAELTILADTEQGTMTIGEEGI QEKLPSRFTREDAIETGRRMLRERALRLGARAEDLEIEVIEDQEFNMVRDFYMTGKNIRVKLQVKPGLIAGFKTGELS
Sequences:
>Translated_558_residues MILGIDVGGTHTDAVLIESGRIRKTAKVTTSPDRIVDSLSGIAQDLLKGESLEKIQRIVLSTTLSTNAIVQNKVDPVGLL VISGPGLSPSHFEIGGNTRFLSGYVNHRGIETAPIDPAEVTRFHEEFLRKGLKHVGIVGKFSTRNPNQELQVEKSIHNGL DHVSLGHRMSGHLNFPRRVATTYLNEAVWERYSSFVRQVISFFQGLGLSVPVYILKADGGTFEIQHSVEFPVYTILSGPA ASIMGILSMTPDNKNDAIALDIGGTTTDIAVFADGVPLLEAFGVTMENHKTLIRGLRSKPVGIGGDSMVYVKDGQILIGP ERKGPAAAFDGPCPTPTDAMIFLGLTDIGNRSKAEKAVQSIAEIMGITVQEAAEIIFENTCEKIALHVHSVIEEINNQPV YTIHELLEGKKISPKILYIIGGPAKPMSTRLGQLLGCPVCVPSYYEVANAIGTALARTTAELTILADTEQGTMTIGEEGI QEKLPSRFTREDAIETGRRMLRERALRLGARAEDLEIEVIEDQEFNMVRDFYMTGKNIRVKLQVKPGLIAGFKTGELS >Mature_558_residues MILGIDVGGTHTDAVLIESGRIRKTAKVTTSPDRIVDSLSGIAQDLLKGESLEKIQRIVLSTTLSTNAIVQNKVDPVGLL VISGPGLSPSHFEIGGNTRFLSGYVNHRGIETAPIDPAEVTRFHEEFLRKGLKHVGIVGKFSTRNPNQELQVEKSIHNGL DHVSLGHRMSGHLNFPRRVATTYLNEAVWERYSSFVRQVISFFQGLGLSVPVYILKADGGTFEIQHSVEFPVYTILSGPA ASIMGILSMTPDNKNDAIALDIGGTTTDIAVFADGVPLLEAFGVTMENHKTLIRGLRSKPVGIGGDSMVYVKDGQILIGP ERKGPAAAFDGPCPTPTDAMIFLGLTDIGNRSKAEKAVQSIAEIMGITVQEAAEIIFENTCEKIALHVHSVIEEINNQPV YTIHELLEGKKISPKILYIIGGPAKPMSTRLGQLLGCPVCVPSYYEVANAIGTALARTTAELTILADTEQGTMTIGEEGI QEKLPSRFTREDAIETGRRMLRERALRLGARAEDLEIEVIEDQEFNMVRDFYMTGKNIRVKLQVKPGLIAGFKTGELS
Specific function: HyuA and hyuB convert D- and L-substituted hydantoins to corresponding N-carbamyl-amino acids [H]
COG id: COG0145
COG function: function code EQ; N-methylhydantoinase A/acetone carboxylase, beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
Organism=Caenorhabditis elegans, GI133901900, Length=390, Percent_Identity=25.1282051282051, Blast_Score=75, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6322634, Length=456, Percent_Identity=25, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI45550492, Length=536, Percent_Identity=24.8134328358209, Blast_Score=92, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008040 - InterPro: IPR002821 [H]
Pfam domain/function: PF05378 Hydant_A_N; PF01968 Hydantoinase_A [H]
EC number: NA
Molecular weight: Translated: 60645; Mature: 60645
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILGIDVGGTHTDAVLIESGRIRKTAKVTTSPDRIVDSLSGIAQDLLKGESLEKIQRIVL CEEEEECCCCCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH STTLSTNAIVQNKVDPVGLLVISGPGLSPSHFEIGGNTRFLSGYVNHRGIETAPIDPAEV HHHCCCCHHECCCCCCEEEEEEECCCCCCCEEEECCCEEEEEEHHCCCCCCCCCCCHHHH TRFHEEFLRKGLKHVGIVGKFSTRNPNQELQVEKSIHNGLDHVSLGHRMSGHLNFPRRVA HHHHHHHHHHHHHHCEEEEEECCCCCCHHHEEHHHHHCCCCHHHCCCCCCCCCCCCHHHH TTYLNEAVWERYSSFVRQVISFFQGLGLSVPVYILKADGGTFEIQHSVEFPVYTILSGPA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEECCCCCEEEEECCCH ASIMGILSMTPDNKNDAIALDIGGTTTDIAVFADGVPLLEAFGVTMENHKTLIRGLRSKP HHHHHHHEECCCCCCCEEEEEECCCCEEEEEEECCCHHHHHHCCCHHHHHHHHHHHHCCC VGIGGDSMVYVKDGQILIGPERKGPAAAFDGPCPTPTDAMIFLGLTDIGNRSKAEKAVQS CCCCCCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHH IAEIMGITVQEAAEIIFENTCEKIALHVHSVIEEINNQPVYTIHELLEGKKISPKILYII HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEEE GGPAKPMSTRLGQLLGCPVCVPSYYEVANAIGTALARTTAELTILADTEQGTMTIGEEGI CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEEECCCCCEEECHHHH QEKLPSRFTREDAIETGRRMLRERALRLGARAEDLEIEVIEDQEFNMVRDFYMTGKNIRV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHCCCCCEEE KLQVKPGLIAGFKTGELS EEEECCCEEECCCCCCCC >Mature Secondary Structure MILGIDVGGTHTDAVLIESGRIRKTAKVTTSPDRIVDSLSGIAQDLLKGESLEKIQRIVL CEEEEECCCCCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH STTLSTNAIVQNKVDPVGLLVISGPGLSPSHFEIGGNTRFLSGYVNHRGIETAPIDPAEV HHHCCCCHHECCCCCCEEEEEEECCCCCCCEEEECCCEEEEEEHHCCCCCCCCCCCHHHH TRFHEEFLRKGLKHVGIVGKFSTRNPNQELQVEKSIHNGLDHVSLGHRMSGHLNFPRRVA HHHHHHHHHHHHHHCEEEEEECCCCCCHHHEEHHHHHCCCCHHHCCCCCCCCCCCCHHHH TTYLNEAVWERYSSFVRQVISFFQGLGLSVPVYILKADGGTFEIQHSVEFPVYTILSGPA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEECCCCCEEEEECCCH ASIMGILSMTPDNKNDAIALDIGGTTTDIAVFADGVPLLEAFGVTMENHKTLIRGLRSKP HHHHHHHEECCCCCCCEEEEEECCCCEEEEEEECCCHHHHHHCCCHHHHHHHHHHHHCCC VGIGGDSMVYVKDGQILIGPERKGPAAAFDGPCPTPTDAMIFLGLTDIGNRSKAEKAVQS CCCCCCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHH IAEIMGITVQEAAEIIFENTCEKIALHVHSVIEEINNQPVYTIHELLEGKKISPKILYII HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEEE GGPAKPMSTRLGQLLGCPVCVPSYYEVANAIGTALARTTAELTILADTEQGTMTIGEEGI CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEEECCCCCEEECHHHH QEKLPSRFTREDAIETGRRMLRERALRLGARAEDLEIEVIEDQEFNMVRDFYMTGKNIRV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHCCCCCEEE KLQVKPGLIAGFKTGELS EEEECCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1732229 [H]