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The map label for this gene is yadS [H]

Identifier: 85859719

GI number: 85859719

Start: 1948788

End: 1949555

Strand: Direct

Name: yadS [H]

Synonym: SYN_03005

Alternate gene names: 85859719

Gene position: 1948788-1949555 (Clockwise)

Preceding gene: 85859714

Following gene: 85859720

Centisome position: 61.3

GC content: 55.99

Gene sequence:

>768_bases
ATGAATAACCTGAGAGCGCCGTATCTTAATTGTTTGACAAACAACGGCACAAATAATAAGGGTGACCGGGCTGTAATTCT
TGGATGGAAAAGAGGAAATGCCTTGACTTATCTGCTGGACATTCTGGGCACTCTGGTTTTTGCCGTTTCCGGGGCCTTCC
GGGCTGTCAAGTACGAACTGGACCTCCTCGGGGTCCTTGTCCTCGCGGTGGCCACCGGGGTGGGCGGAGGAATTCTCCGC
GATCTCCTGATCGGTTTTGTGCCTCCGTCGGCCTTCCGGGATGAAACCTATCTTCTTGTCTGCTTTCTTGGCGGACTGCT
TGTCTTTCTCGCCGCGCCCAAAATCGCACGGCGTTGGGACCTGGTGATGGCGGCGGATGCTTTGGGACTGGGGGTGTTTT
CCGCAATCGGCGCCGCCAAGGCCGCGGAGTTTCACCTTGGGCCCGTGGGAATCGTCATGATGGCTGTTCTGACTGCTACG
GGAGGAGGGGTTGTCCGGGATATCCTGGTAAGAGAAATTCCTGCGGTTATCCGGGTCGATTTTTACGCGACCGCCGCCCT
CTGCGGCGGGCTTTCTTTTCTGGCTGCCGGACTGGCCGGTATGAACGAGTTTTTTCAGCTTCTCATCTCCATTATCGTTG
CCACAGGGCTGCGGCTCATCGCCATGATTTATCGGATTAATCTTCCCCGGGTGCGCAGCCTGCCTGAATCTCCCACGGAG
TTGACCCACAGGCATAAAGCTGAGAAGAAAAAACCTCGCGCCTTCTGA

Upstream 100 bases:

>100_bases
AACTCTCTCTGCATAATATCTTTTCATCTGATCCAAATCAATCCTGTTGTTTTATAATTCCGCTTCCCCTCCCGAAACAT
CGCAAAGGCAGTCCTGAATC

Downstream 100 bases:

>100_bases
ATGTCTCCTGCCATCATCGTCTGTCGCCCGATCCGGCATGTTCCCCGAAGCCTGACAAATTGCTTGATTTATCAGAAATG
ATGATATAGAAGGCGTCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MNNLRAPYLNCLTNNGTNNKGDRAVILGWKRGNALTYLLDILGTLVFAVSGAFRAVKYELDLLGVLVLAVATGVGGGILR
DLLIGFVPPSAFRDETYLLVCFLGGLLVFLAAPKIARRWDLVMAADALGLGVFSAIGAAKAAEFHLGPVGIVMMAVLTAT
GGGVVRDILVREIPAVIRVDFYATAALCGGLSFLAAGLAGMNEFFQLLISIIVATGLRLIAMIYRINLPRVRSLPESPTE
LTHRHKAEKKKPRAF

Sequences:

>Translated_255_residues
MNNLRAPYLNCLTNNGTNNKGDRAVILGWKRGNALTYLLDILGTLVFAVSGAFRAVKYELDLLGVLVLAVATGVGGGILR
DLLIGFVPPSAFRDETYLLVCFLGGLLVFLAAPKIARRWDLVMAADALGLGVFSAIGAAKAAEFHLGPVGIVMMAVLTAT
GGGVVRDILVREIPAVIRVDFYATAALCGGLSFLAAGLAGMNEFFQLLISIIVATGLRLIAMIYRINLPRVRSLPESPTE
LTHRHKAEKKKPRAF
>Mature_255_residues
MNNLRAPYLNCLTNNGTNNKGDRAVILGWKRGNALTYLLDILGTLVFAVSGAFRAVKYELDLLGVLVLAVATGVGGGILR
DLLIGFVPPSAFRDETYLLVCFLGGLLVFLAAPKIARRWDLVMAADALGLGVFSAIGAAKAAEFHLGPVGIVMMAVLTAT
GGGVVRDILVREIPAVIRVDFYATAALCGGLSFLAAGLAGMNEFFQLLISIIVATGLRLIAMIYRINLPRVRSLPESPTE
LTHRHKAEKKKPRAF

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family [H]

Homologues:

Organism=Escherichia coli, GI1786352, Length=198, Percent_Identity=38.8888888888889, Blast_Score=104, Evalue=7e-24,
Organism=Escherichia coli, GI87082304, Length=161, Percent_Identity=33.5403726708075, Blast_Score=90, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005115 [H]

Pfam domain/function: PF03458 UPF0126 [H]

EC number: NA

Molecular weight: Translated: 27235; Mature: 27235

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNLRAPYLNCLTNNGTNNKGDRAVILGWKRGNALTYLLDILGTLVFAVSGAFRAVKYEL
CCCCCCCHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLLGVLVLAVATGVGGGILRDLLIGFVPPSAFRDETYLLVCFLGGLLVFLAAPKIARRWD
HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHH
LVMAADALGLGVFSAIGAAKAAEFHLGPVGIVMMAVLTATGGGVVRDILVREIPAVIRVD
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
FYATAALCGGLSFLAAGLAGMNEFFQLLISIIVATGLRLIAMIYRINLPRVRSLPESPTE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHH
LTHRHKAEKKKPRAF
HHHHHHHHCCCCCCC
>Mature Secondary Structure
MNNLRAPYLNCLTNNGTNNKGDRAVILGWKRGNALTYLLDILGTLVFAVSGAFRAVKYEL
CCCCCCCHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLLGVLVLAVATGVGGGILRDLLIGFVPPSAFRDETYLLVCFLGGLLVFLAAPKIARRWD
HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHH
LVMAADALGLGVFSAIGAAKAAEFHLGPVGIVMMAVLTATGGGVVRDILVREIPAVIRVD
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
FYATAALCGGLSFLAAGLAGMNEFFQLLISIIVATGLRLIAMIYRINLPRVRSLPESPTE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHH
LTHRHKAEKKKPRAF
HHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA