| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85859702
Identifier: 85859702
GI number: 85859702
Start: 1932302
End: 1933051
Strand: Direct
Name: 85859702
Synonym: SYN_01985
Alternate gene names: NA
Gene position: 1932302-1933051 (Clockwise)
Preceding gene: 85859701
Following gene: 85859708
Centisome position: 60.78
GC content: 52.4
Gene sequence:
>750_bases GTGAGCAGCGTTTCCATCCATGCGGTTCTGATCCCCCTCGACGGTTCCTCCTTCAGCCAAAGGGCAGTTGCATACGGGAT TTATGTCGCCAAAAAAATGAATATTCAACTGATCGGAATACATGCCAGAACCCGGGGGGATTCGTCAGCAGAGGAAACCT TTATCGAGATCTTTTTGGAAGACTGCCGTCGTTTCGGCATTTCAATGGAGCTCCGGCAAACGACGGATTTGTCCTCAGCA GCAATCCTGGAGGCGACAGCGGATAAGGAAACCGGGCTTTTTCTCATTCCCAGACCGGATCGCCTCGAACTTCAAAGCAC GCAGAATAAACCAGCGCATCTCGCCCTTCCCGGCGCGCCTTACACTCTGATGGTCATTCCTCCAGAATTTCGGGAAATTG AAAGTATGGGGCTGATCTATAACGGATGCTCCGAAGGGGACCATTCCCTTGATTTGGCTGTCTCTCTTTCCCGGCAAGCT TCCTGGCCGCTGACGATCCTTCTTCCTTCCGAAGATCCATTTCGGATTGATTCTCTCAACCGTCAACTGGAAGATTACTT TGACCAGCTGACCGGTGAACCGCTCATCGACTGGGATACCGTTGTCCTAAGCGGACAACAGGGAGAAGCAGCTTTCCGTT TCCTCCTCGACGGCTCCATCGAACTGCTGGTCATGTCCCGGCCCGACCTGGACTCATCCATGGTGATGCTTCTCAACAAA AGCCCGATTCCCGTGATTGTCACACGTTAA
Upstream 100 bases:
>100_bases GACCAGCAGAAAACCGGGAGAAATTATTTTGAAAAATCGCCGTCCTTCTGATATGGACTCCTCAATTTAAGAAACAGTTA AAATAGGGAAAAGGAAGACA
Downstream 100 bases:
>100_bases AGCTCATTTAATCCTGGAAATCACATTTCGCAACAGGAAGAAGGCTGGTTTCCTTTGACAGAAGAGCCTTTAAACCATCC AGTGCGTCATAGCGTGTCAT
Product: universal stress family protein N
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MSSVSIHAVLIPLDGSSFSQRAVAYGIYVAKKMNIQLIGIHARTRGDSSAEETFIEIFLEDCRRFGISMELRQTTDLSSA AILEATADKETGLFLIPRPDRLELQSTQNKPAHLALPGAPYTLMVIPPEFREIESMGLIYNGCSEGDHSLDLAVSLSRQA SWPLTILLPSEDPFRIDSLNRQLEDYFDQLTGEPLIDWDTVVLSGQQGEAAFRFLLDGSIELLVMSRPDLDSSMVMLLNK SPIPVIVTR
Sequences:
>Translated_249_residues MSSVSIHAVLIPLDGSSFSQRAVAYGIYVAKKMNIQLIGIHARTRGDSSAEETFIEIFLEDCRRFGISMELRQTTDLSSA AILEATADKETGLFLIPRPDRLELQSTQNKPAHLALPGAPYTLMVIPPEFREIESMGLIYNGCSEGDHSLDLAVSLSRQA SWPLTILLPSEDPFRIDSLNRQLEDYFDQLTGEPLIDWDTVVLSGQQGEAAFRFLLDGSIELLVMSRPDLDSSMVMLLNK SPIPVIVTR >Mature_248_residues SSVSIHAVLIPLDGSSFSQRAVAYGIYVAKKMNIQLIGIHARTRGDSSAEETFIEIFLEDCRRFGISMELRQTTDLSSAA ILEATADKETGLFLIPRPDRLELQSTQNKPAHLALPGAPYTLMVIPPEFREIESMGLIYNGCSEGDHSLDLAVSLSRQAS WPLTILLPSEDPFRIDSLNRQLEDYFDQLTGEPLIDWDTVVLSGQQGEAAFRFLLDGSIELLVMSRPDLDSSMVMLLNKS PIPVIVTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27598; Mature: 27467
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVSIHAVLIPLDGSSFSQRAVAYGIYVAKKMNIQLIGIHARTRGDSSAEETFIEIFLE CCCEEEEEEEEEECCCCCCCHHEEEEEEEEEECCEEEEEEEEECCCCCHHHHHHHHHHHH DCRRFGISMELRQTTDLSSAAILEATADKETGLFLIPRPDRLELQSTQNKPAHLALPGAP HHHHCCCEEEEECCCCCCCEEEEEECCCCCCCEEEEECCCCEEEECCCCCCCEEEECCCC YTLMVIPPEFREIESMGLIYNGCSEGDHSLDLAVSLSRQASWPLTILLPSEDPFRIDSLN EEEEEECCCHHHHHHCCEEEECCCCCCCCEEEEEEECCCCCCCEEEEECCCCCEEHHHHH RQLEDYFDQLTGEPLIDWDTVVLSGQQGEAAFRFLLDGSIELLVMSRPDLDSSMVMLLNK HHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEEECCCEEEEEEECCCCCCCEEEEECC SPIPVIVTR CCCCEEEEC >Mature Secondary Structure SSVSIHAVLIPLDGSSFSQRAVAYGIYVAKKMNIQLIGIHARTRGDSSAEETFIEIFLE CCEEEEEEEEEECCCCCCCHHEEEEEEEEEECCEEEEEEEEECCCCCHHHHHHHHHHHH DCRRFGISMELRQTTDLSSAAILEATADKETGLFLIPRPDRLELQSTQNKPAHLALPGAP HHHHCCCEEEEECCCCCCCEEEEEECCCCCCCEEEEECCCCEEEECCCCCCCEEEECCCC YTLMVIPPEFREIESMGLIYNGCSEGDHSLDLAVSLSRQASWPLTILLPSEDPFRIDSLN EEEEEECCCHHHHHHCCEEEECCCCCCCCEEEEEEECCCCCCCEEEEECCCCCEEHHHHH RQLEDYFDQLTGEPLIDWDTVVLSGQQGEAAFRFLLDGSIELLVMSRPDLDSSMVMLLNK HHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEEECCCEEEEEEECCCCCCCEEEEECC SPIPVIVTR CCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA