| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85859552
Identifier: 85859552
GI number: 85859552
Start: 1774076
End: 1774426
Strand: Direct
Name: 85859552
Synonym: SYN_01894
Alternate gene names: NA
Gene position: 1774076-1774426 (Clockwise)
Preceding gene: 85859551
Following gene: 85859553
Centisome position: 55.8
GC content: 56.7
Gene sequence:
>351_bases ATGAAAGACGAAAAAAACACGAACGAGACGGAAAAGGGACTGGGTTTCGACGCCGAGGACATGTTCGGCCGAGAGGAAGA CACCGCAGGAGAATTTTCTCCCGGTGGTTTCACCAGGGGGAAGTTCCGCAAGGTTTTCATCAGCGCCGTCAAAAGGGACG GCACGGCAATCCGGGTCAAGGATCGGTGGTACGAGATCACCGACAGGACCAAGAACGAGGCCGGCGAACTGGTGAAGGGC ATGGAGATCAACCTCTACTATGCCACGGGCGAGAAGAAGAACTTCGCCAACGCGATTTACCCGGTCGCAGAGGCGCTCGC TCCCGCCGGCGAAATGGTTCCCGTAATGTAA
Upstream 100 bases:
>100_bases GGAACAAGCCCGTGGAGGGGAAACCGGGAATCTACGTCGGCGTCAACTGCTACAAAAAGTAAGTCGATCAACCAACAAAA ATCATGAAAGGAGAAGAACG
Downstream 100 bases:
>100_bases GCGGAAATAAAAAGCAAGTCCCCCGGCATCGCTGGGATGAACCCTGACGAAACAATCAGGGCATGCAGTCTCCAGCGGTC GAGGGAAACCCCTCTTCCTC
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MKDEKNTNETEKGLGFDAEDMFGREEDTAGEFSPGGFTRGKFRKVFISAVKRDGTAIRVKDRWYEITDRTKNEAGELVKG MEINLYYATGEKKNFANAIYPVAEALAPAGEMVPVM
Sequences:
>Translated_116_residues MKDEKNTNETEKGLGFDAEDMFGREEDTAGEFSPGGFTRGKFRKVFISAVKRDGTAIRVKDRWYEITDRTKNEAGELVKG MEINLYYATGEKKNFANAIYPVAEALAPAGEMVPVM >Mature_116_residues MKDEKNTNETEKGLGFDAEDMFGREEDTAGEFSPGGFTRGKFRKVFISAVKRDGTAIRVKDRWYEITDRTKNEAGELVKG MEINLYYATGEKKNFANAIYPVAEALAPAGEMVPVM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12966; Mature: 12966
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDEKNTNETEKGLGFDAEDMFGREEDTAGEFSPGGFTRGKFRKVFISAVKRDGTAIRVK CCCCCCCCCHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEE DRWYEITDRTKNEAGELVKGMEINLYYATGEKKNFANAIYPVAEALAPAGEMVPVM CCEEECCCCCCHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKDEKNTNETEKGLGFDAEDMFGREEDTAGEFSPGGFTRGKFRKVFISAVKRDGTAIRVK CCCCCCCCCHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEE DRWYEITDRTKNEAGELVKGMEINLYYATGEKKNFANAIYPVAEALAPAGEMVPVM CCEEECCCCCCHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA