Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85859520

Identifier: 85859520

GI number: 85859520

Start: 1741588

End: 1742442

Strand: Direct

Name: 85859520

Synonym: SYN_01862

Alternate gene names: NA

Gene position: 1741588-1742442 (Clockwise)

Preceding gene: 85859519

Following gene: 85859521

Centisome position: 54.78

GC content: 57.43

Gene sequence:

>855_bases
ATGAAAAAGAACATGCTTAAAAAAAAGGTGGGAATGCTTCTCGTTCTCACGCTGGCCGTTTCCGTCCTCGGGAGCGCGGG
CATCGCATCCAGCCAGGAAGAAAATGTCCCCGAAAACCGTGAAACGGCCGACGTACAGATCACTAAACTACCGGCGGAGG
GCGCCGTCACCGTCATGCCCGAGGTCGCCCAGCCCGTCGAGCTGAGCAGTTCGGACGTGAACCGGATCACCTGCCAGGGC
GAAATCAAGGACGTCGTCTACTCAAGGGAGAAGGGGATCACGGTCAAGTTCAGCGGCAGGGACGCTTTCGTCAAGTTCCG
TACGGGCTTGAAGGATGGCAAGAGCACGTACAGCACGACGCCGTCGGAGATCTTCGTCGTTTGCGGCGATAACGTTTACA
GCCTGATCGCTCTTCCCAAGAGAATCCCCGCCCGGTCCATCAGGCTCTCCCCGGGAAAAACGGAGAACATCAGGAAGAAC
AGGTCGCTTTTCGGCGCCCTCCCTTTTGAGAAGAAGGTCCTCTCCGCGATCCGGAGCCTCTACACGGAAGAGATTCCCGA
GAGCTTCACCGTATCCACCCCCAACAAGAGAATCGATCTCTTTCGTGACCTGGATATCGTCCTTGCCAGGGTAGCGGTGG
TCGAAGGCGAGGGTATCCAGGTTAAGGAGTACCGCGGCACGCTCGCCGGTGGAGACAAGGACAGGATCGAGCTCGGCGAA
AAGGATTTTCTCCGAAACGAAATCTCCACCGACCCCATCGCCGTCTCCCTGGACAGGCTTGTCCTGAAAAAGGGGGAGAT
CCTGAGAGCCTTCGTGGTCGAATCTCACCGGGAGGAACCGGGCGATGAAAGATAA

Upstream 100 bases:

>100_bases
CGAAGACATACCTCATCGATTACAGGATCTCGGACGGCAGGTTCCAGGTCGTCAGGATATCGGAGAAGGAAGATGCGAAC
AGCCAGGCGGCGAGGTTGCC

Downstream 100 bases:

>100_bases
GTTGAAGACCATCTGGGCGAACGTCACACCGCGGCAAAAGCGGAACCTTGTCCTTCTCGCCATGGCGACGGTGGTACTGG
CGTTCAGCCTCGCGGGGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MKKNMLKKKVGMLLVLTLAVSVLGSAGIASSQEENVPENRETADVQITKLPAEGAVTVMPEVAQPVELSSSDVNRITCQG
EIKDVVYSREKGITVKFSGRDAFVKFRTGLKDGKSTYSTTPSEIFVVCGDNVYSLIALPKRIPARSIRLSPGKTENIRKN
RSLFGALPFEKKVLSAIRSLYTEEIPESFTVSTPNKRIDLFRDLDIVLARVAVVEGEGIQVKEYRGTLAGGDKDRIELGE
KDFLRNEISTDPIAVSLDRLVLKKGEILRAFVVESHREEPGDER

Sequences:

>Translated_284_residues
MKKNMLKKKVGMLLVLTLAVSVLGSAGIASSQEENVPENRETADVQITKLPAEGAVTVMPEVAQPVELSSSDVNRITCQG
EIKDVVYSREKGITVKFSGRDAFVKFRTGLKDGKSTYSTTPSEIFVVCGDNVYSLIALPKRIPARSIRLSPGKTENIRKN
RSLFGALPFEKKVLSAIRSLYTEEIPESFTVSTPNKRIDLFRDLDIVLARVAVVEGEGIQVKEYRGTLAGGDKDRIELGE
KDFLRNEISTDPIAVSLDRLVLKKGEILRAFVVESHREEPGDER
>Mature_284_residues
MKKNMLKKKVGMLLVLTLAVSVLGSAGIASSQEENVPENRETADVQITKLPAEGAVTVMPEVAQPVELSSSDVNRITCQG
EIKDVVYSREKGITVKFSGRDAFVKFRTGLKDGKSTYSTTPSEIFVVCGDNVYSLIALPKRIPARSIRLSPGKTENIRKN
RSLFGALPFEKKVLSAIRSLYTEEIPESFTVSTPNKRIDLFRDLDIVLARVAVVEGEGIQVKEYRGTLAGGDKDRIELGE
KDFLRNEISTDPIAVSLDRLVLKKGEILRAFVVESHREEPGDER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31352; Mature: 31352

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNMLKKKVGMLLVLTLAVSVLGSAGIASSQEENVPENRETADVQITKLPAEGAVTVMP
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECC
EVAQPVELSSSDVNRITCQGEIKDVVYSREKGITVKFSGRDAFVKFRTGLKDGKSTYSTT
CCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCCCCCCCC
PSEIFVVCGDNVYSLIALPKRIPARSIRLSPGKTENIRKNRSLFGALPFEKKVLSAIRSL
CCEEEEEECCCEEEEHHHHCCCCCCEEEECCCCCCHHHHCCHHEECCCHHHHHHHHHHHH
YTEEIPESFTVSTPNKRIDLFRDLDIVLARVAVVEGEGIQVKEYRGTLAGGDKDRIELGE
HHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCCCHHHHCCH
KDFLRNEISTDPIAVSLDRLVLKKGEILRAFVVESHREEPGDER
HHHHHHHCCCCCEEEHHHHHHHHCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKKNMLKKKVGMLLVLTLAVSVLGSAGIASSQEENVPENRETADVQITKLPAEGAVTVMP
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECC
EVAQPVELSSSDVNRITCQGEIKDVVYSREKGITVKFSGRDAFVKFRTGLKDGKSTYSTT
CCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCCCCCCCC
PSEIFVVCGDNVYSLIALPKRIPARSIRLSPGKTENIRKNRSLFGALPFEKKVLSAIRSL
CCEEEEEECCCEEEEHHHHCCCCCCEEEECCCCCCHHHHCCHHEECCCHHHHHHHHHHHH
YTEEIPESFTVSTPNKRIDLFRDLDIVLARVAVVEGEGIQVKEYRGTLAGGDKDRIELGE
HHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCCCHHHHCCH
KDFLRNEISTDPIAVSLDRLVLKKGEILRAFVVESHREEPGDER
HHHHHHHCCCCCEEEHHHHHHHHCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA