| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
Click here to switch to the map view.
The map label for this gene is 85859491
Identifier: 85859491
GI number: 85859491
Start: 1705739
End: 1706902
Strand: Direct
Name: 85859491
Synonym: SYN_01832
Alternate gene names: NA
Gene position: 1705739-1706902 (Clockwise)
Preceding gene: 85859490
Following gene: 85859492
Centisome position: 53.65
GC content: 50.17
Gene sequence:
>1164_bases ATGAAAGGATTTCCAAAGCGGGGTTTTATATTCTGGCCGGTCGGTACCGGTGATAGTACGACCATTGTTGTAGACAAAGA GGACGGGATCATATTACAAATCGACCTGCGCCATATGGAATGCGCTACAGAGGAAGACGATCCTCATGTTCCGATCATTG ATATCCTCAAACAAGAGCTTCCGGAGCTGAACGAGAAACCCCACCTGTCAGTGTTCGCGTTGACACATCCCGATAAGGAT CACTGCCAGGGGTTTTCGCAATTGATAAAAGAAGTCACAATCGGGGAACTCTGGTTTTCGCCACGAATATTCCGAGAATA TCACAAGGACCTTTGCGAAGACGCCTCGGCCTTCAAGAAAGAAGCTATGAGGCGTGTCAAGAAAACGATCACTAGCAAAG GGAATGTTGGTTCCGGAGATCGCGTCCACATCATCGGCTATGATGATCTCCTGAAAGAAGAGGAATTCGAAGGATTCCCT CAAGACCAGCTGACCGTTCCGGGAAACTCCATCACTGAACTAAATGGGGAGGATTATTCAGATTGCTTCAATGCTTTCGT CCATGCGCCATTTAAGGACGACAGCGAAGGCGAGCGAAATGACACAAGTCTTGCTTTTCGGATAGCCCTGTCTGATGGAG AAGTTACCGGCTTTGCCATGCTTCTTGGCGATCACTGCTACCCCACAGTAAAGCGCATTTTCGACCGAACCACTGATAAA AATAATTTGGCTTGGAACGTATTTCTTGCCCCACACCACTGTTCCAAGGGAGTCATGTACTGGTGCGATGAGGGCGAGAA GGAAGAAACCCTTCGGCAGGGCGTTCTTGACGCGATTGAGAAGGCAGCCAGTGACCCAGGCTATATCGTCGCCAGTTCAG AACCAATCCCAAAATCAAACGAAGCCGGCGATAATCCGCCACATGCAATAGCGAAAAACCGGTACGAGGAAATAGCGCCA GACGGGTTTGTGTGCACACAGGAACATGGAGGCAAGGATCACCCTCAACCAATCATTTTTGAAGTGACCACCGCAGGCCT TACATACTGGGGGTCTCAAGTCGCAAAAGCAGCGGGACTGACCTCCCTGGCGAAAGCTATCGAGCAGGCACGCGGAGGCG CGGCACCACCTTCAGATAGAGTTGGATTCGGGGAAAATCGATGA
Upstream 100 bases:
>100_bases CGTTCTGATGGTTCGATCTTTATAAAGATCAACGATAAAGGGGAATGGTGGGTCCATCCGGGAACTCGTTGGTTAAGGGA TTAAAGGAGGGGGGAATATC
Downstream 100 bases:
>100_bases CAGCGGGGCAGGAACTCGCACAAGAAGAACTGCGCGAGATCGAGGCTGCGTCAGAGGGTGCGTTCGAAGTCCTTTCTGTG AGGTTTCCAGAAGGGGATCA
Product: cytoplasmic protein
Products: NA
Alternate protein names: Cytoplasmic Protein
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MKGFPKRGFIFWPVGTGDSTTIVVDKEDGIILQIDLRHMECATEEDDPHVPIIDILKQELPELNEKPHLSVFALTHPDKD HCQGFSQLIKEVTIGELWFSPRIFREYHKDLCEDASAFKKEAMRRVKKTITSKGNVGSGDRVHIIGYDDLLKEEEFEGFP QDQLTVPGNSITELNGEDYSDCFNAFVHAPFKDDSEGERNDTSLAFRIALSDGEVTGFAMLLGDHCYPTVKRIFDRTTDK NNLAWNVFLAPHHCSKGVMYWCDEGEKEETLRQGVLDAIEKAASDPGYIVASSEPIPKSNEAGDNPPHAIAKNRYEEIAP DGFVCTQEHGGKDHPQPIIFEVTTAGLTYWGSQVAKAAGLTSLAKAIEQARGGAAPPSDRVGFGENR
Sequences:
>Translated_387_residues MKGFPKRGFIFWPVGTGDSTTIVVDKEDGIILQIDLRHMECATEEDDPHVPIIDILKQELPELNEKPHLSVFALTHPDKD HCQGFSQLIKEVTIGELWFSPRIFREYHKDLCEDASAFKKEAMRRVKKTITSKGNVGSGDRVHIIGYDDLLKEEEFEGFP QDQLTVPGNSITELNGEDYSDCFNAFVHAPFKDDSEGERNDTSLAFRIALSDGEVTGFAMLLGDHCYPTVKRIFDRTTDK NNLAWNVFLAPHHCSKGVMYWCDEGEKEETLRQGVLDAIEKAASDPGYIVASSEPIPKSNEAGDNPPHAIAKNRYEEIAP DGFVCTQEHGGKDHPQPIIFEVTTAGLTYWGSQVAKAAGLTSLAKAIEQARGGAAPPSDRVGFGENR >Mature_387_residues MKGFPKRGFIFWPVGTGDSTTIVVDKEDGIILQIDLRHMECATEEDDPHVPIIDILKQELPELNEKPHLSVFALTHPDKD HCQGFSQLIKEVTIGELWFSPRIFREYHKDLCEDASAFKKEAMRRVKKTITSKGNVGSGDRVHIIGYDDLLKEEEFEGFP QDQLTVPGNSITELNGEDYSDCFNAFVHAPFKDDSEGERNDTSLAFRIALSDGEVTGFAMLLGDHCYPTVKRIFDRTTDK NNLAWNVFLAPHHCSKGVMYWCDEGEKEETLRQGVLDAIEKAASDPGYIVASSEPIPKSNEAGDNPPHAIAKNRYEEIAP DGFVCTQEHGGKDHPQPIIFEVTTAGLTYWGSQVAKAAGLTSLAKAIEQARGGAAPPSDRVGFGENR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42935; Mature: 42935
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGFPKRGFIFWPVGTGDSTTIVVDKEDGIILQIDLRHMECATEEDDPHVPIIDILKQEL CCCCCCCCEEEEECCCCCCEEEEEECCCCEEEEEECCHHHCCCCCCCCCCCHHHHHHHHH PELNEKPHLSVFALTHPDKDHCQGFSQLIKEVTIGELWFSPRIFREYHKDLCEDASAFKK HCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH EAMRRVKKTITSKGNVGSGDRVHIIGYDDLLKEEEFEGFPQDQLTVPGNSITELNGEDYS HHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHCCCCCCCEECCCCCEEECCCCCHH DCFNAFVHAPFKDDSEGERNDTSLAFRIALSDGEVTGFAMLLGDHCYPTVKRIFDRTTDK HHHHHHEECCCCCCCCCCCCCCEEEEEEEECCCCCEEEHEECCCCCHHHHHHHHHCCCCC NNLAWNVFLAPHHCSKGVMYWCDEGEKEETLRQGVLDAIEKAASDPGYIVASSEPIPKSN CCEEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC EAGDNPPHAIAKNRYEEIAPDGFVCTQEHGGKDHPQPIIFEVTTAGLTYWGSQVAKAAGL CCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHH TSLAKAIEQARGGAAPPSDRVGFGENR HHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKGFPKRGFIFWPVGTGDSTTIVVDKEDGIILQIDLRHMECATEEDDPHVPIIDILKQEL CCCCCCCCEEEEECCCCCCEEEEEECCCCEEEEEECCHHHCCCCCCCCCCCHHHHHHHHH PELNEKPHLSVFALTHPDKDHCQGFSQLIKEVTIGELWFSPRIFREYHKDLCEDASAFKK HCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH EAMRRVKKTITSKGNVGSGDRVHIIGYDDLLKEEEFEGFPQDQLTVPGNSITELNGEDYS HHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHCCCCCCCEECCCCCEEECCCCCHH DCFNAFVHAPFKDDSEGERNDTSLAFRIALSDGEVTGFAMLLGDHCYPTVKRIFDRTTDK HHHHHHEECCCCCCCCCCCCCCEEEEEEEECCCCCEEEHEECCCCCHHHHHHHHHCCCCC NNLAWNVFLAPHHCSKGVMYWCDEGEKEETLRQGVLDAIEKAASDPGYIVASSEPIPKSN CCEEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC EAGDNPPHAIAKNRYEEIAPDGFVCTQEHGGKDHPQPIIFEVTTAGLTYWGSQVAKAAGL CCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHH TSLAKAIEQARGGAAPPSDRVGFGENR HHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA