Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85859471

Identifier: 85859471

GI number: 85859471

Start: 1677804

End: 1678154

Strand: Direct

Name: 85859471

Synonym: SYN_00763

Alternate gene names: NA

Gene position: 1677804-1678154 (Clockwise)

Preceding gene: 85859470

Following gene: 85859475

Centisome position: 52.77

GC content: 44.44

Gene sequence:

>351_bases
ATGACAATGTCTGAATCATTTGAGGAATCTTCCATAGAATGCATGACCGTGCAAAATCGCTTTGTGCCACCGGAGATATG
CAAAGGGGCAGTGAACAGGGTCGGCTCAGTTACACGAAATTCCTTAGAGATAAAGATCGATTCGACCATACAGCAAAAGA
TATCCGATTCAGTTGCAAAGGCGGTAAAAGCTATTGAGGCGATGCAGAAGAACACGGATCTCATGAAAGCCTTAAGGACA
ATCAGGGAAGGAAAAGGGGACAAGGCCACGGTAGAAATAGTTTGTAAAGAGTTTGATGTCCTGGAGAAGGAACTCCTCGC
CAGAGAGAAACATCACACTGTTCACGAATAA

Upstream 100 bases:

>100_bases
TTTTAAGCGCTGAAGAGACAGCAACTACAGATTGCCGTAAAGAATATTCGGAATAGGAAAAACTTTTTATATTCATGGCT
CGGTAAATAAAGAAAGGAGC

Downstream 100 bases:

>100_bases
GAGGAGCATAGAATGCGGCTCTTCCGAGGCCGGAAATGGTCAGCCCGACAAAAGCCTTCAGGCTGACTTCCGCCTGTTTC
TGTTTAGTATTACATCATGA

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MTMSESFEESSIECMTVQNRFVPPEICKGAVNRVGSVTRNSLEIKIDSTIQQKISDSVAKAVKAIEAMQKNTDLMKALRT
IREGKGDKATVEIVCKEFDVLEKELLAREKHHTVHE

Sequences:

>Translated_116_residues
MTMSESFEESSIECMTVQNRFVPPEICKGAVNRVGSVTRNSLEIKIDSTIQQKISDSVAKAVKAIEAMQKNTDLMKALRT
IREGKGDKATVEIVCKEFDVLEKELLAREKHHTVHE
>Mature_115_residues
TMSESFEESSIECMTVQNRFVPPEICKGAVNRVGSVTRNSLEIKIDSTIQQKISDSVAKAVKAIEAMQKNTDLMKALRTI
REGKGDKATVEIVCKEFDVLEKELLAREKHHTVHE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13035; Mature: 12904

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMSESFEESSIECMTVQNRFVPPEICKGAVNRVGSVTRNSLEIKIDSTIQQKISDSVAK
CCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHH
AVKAIEAMQKNTDLMKALRTIREGKGDKATVEIVCKEFDVLEKELLAREKHHTVHE
HHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TMSESFEESSIECMTVQNRFVPPEICKGAVNRVGSVTRNSLEIKIDSTIQQKISDSVAK
CCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHH
AVKAIEAMQKNTDLMKALRTIREGKGDKATVEIVCKEFDVLEKELLAREKHHTVHE
HHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA