| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is pfp [H]
Identifier: 85859467
GI number: 85859467
Start: 1672743
End: 1674134
Strand: Direct
Name: pfp [H]
Synonym: SYN_00887
Alternate gene names: 85859467
Gene position: 1672743-1674134 (Clockwise)
Preceding gene: 85859466
Following gene: 85859469
Centisome position: 52.61
GC content: 45.4
Gene sequence:
>1392_bases TTGCGGCACGGGAGGATTAATGGTTTCATGAAAAAAGTTCAGCAGGAAGATTATATTATACAAAACTTGGGTGAATGTGC GATCCAGTCTCCGGTAATCGTTAATGATTTTACGCCCGACAGCAAGCGTTTGCTGCTGAAACAATATCTTGACTATAGTA ATACCGGAAAAAATAAGGACGAAAAAGTGAAAAGGGAGATTCCCCTTTCTGTGGAAGTGGCAGGTCCACGGGAAAAAATA TTTTTCGATCCTTCCAAAACAAAAGCGGCGATTGTCACTTGCGGCGGCTTGTGCCCGGGAATCAATGACGTGATTCGCGC CATCGTCATGCAATTATATCACCGTTACGGTGTTCGCAACATAATTGGAATAAAGTATGGATTCCAAGGACTTATACCAT CATACGGACATGAAATTGTTGAATTGACGCCTGAATCGGTTGAAAATATCCATCGCGAAGGTGGCAGTATATTATCTTCC TCACGAGGTCAGCAGAATATTGGAGAAATGGTTGACGCCCTTTCGCGAATGAATGTCAATATTTTTTTCTGTATCGGCGG TGATGGAACCATGCGCGCGGCTGAACGCATTACAGAGGAAATTACAAGACGAAAATTAAGCATAAGCCTAATCGGTATCC CGAAAACGATCGATAACGATCTGAATTTTGTTCAGAAAACATTCGGGTTTGATACAGCAATCGCTGAATCCGAAAACGCA ATCTCCTGCGCCCATGTTGAAGCGAAAGGTGCGCCTATGGGAATAGGACTCGTCAAGATTATGGGACGGCTCTCCGGTCA GATCGCTGTTGGTGCGGCACTGGCACAGAATGACGTCAATTTTGTCCTGATTCCCGAAGTACCTTTTGATCTTGAAGGCG AAAACGGCCTCTTCAAAGCCTTGGAAAAACGTCTCATACGCAGAAAACATTGTGTTATTCTTGTGGCAGAAGGCGCCGGT CAGGAACTGATGCGCACAAATAATACGCCTCAGGAAACAGATGCTTCCGGCAATATCCGTCTGCTGGATATCGGCTATTT TTTAAAGGTGCGGATTGAAGACTACTTTAAAAAAGCGGGCATCCAGATCAATCTGAAATATATTGACCCCAGCTATATGA TTCGCAGTGTTCGCGCAAGTGCCAGCGACAGTATCTATTGCTCCGCTCTTGGCCAGTACGCCGTTCATGCCGGGATGGCC GGAAAAACCGGGATGCTGGTCGGTTTATTGAAAGATGAATATGTCCACTTGCCAATCCGGGTTGTTACTTCAGGGAAACA GATCGATCCGGAAGGCAATTTATGGATGCGGGTTCTTGAATCGACGGGTCAGCCTCCTTCCTTGCTTAATAAACCTTTGG ACCCTCCTGTTGAGGAACATGTTGTTATTTGA
Upstream 100 bases:
>100_bases AAACTTTATATAATATTATACTATCAATTACATATATAAAGGGCTGTTCTGTTCTTTTTTTTGTGTTATACATAAATTAA AACATATTTTAGTCTCCAGC
Downstream 100 bases:
>100_bases ATTTTTCCATGGGTGAGAAAAGCCCGCCAGTTAAACCTTACCGGCGGGCTAAGCATAAATCCAACACCTATAGAAAAATC CAGGTTAAATATCTAACTTT
Product: diphosphate--fructose-6-phosphate 1-phosphotransferase
Products: NA
Alternate protein names: 6-phosphofructokinase, pyrophosphate dependent; PPi-dependent phosphofructokinase; PPi-PFK; Pyrophosphate-dependent 6-phosphofructose-1-kinase [H]
Number of amino acids: Translated: 463; Mature: 463
Protein sequence:
>463_residues MRHGRINGFMKKVQQEDYIIQNLGECAIQSPVIVNDFTPDSKRLLLKQYLDYSNTGKNKDEKVKREIPLSVEVAGPREKI FFDPSKTKAAIVTCGGLCPGINDVIRAIVMQLYHRYGVRNIIGIKYGFQGLIPSYGHEIVELTPESVENIHREGGSILSS SRGQQNIGEMVDALSRMNVNIFFCIGGDGTMRAAERITEEITRRKLSISLIGIPKTIDNDLNFVQKTFGFDTAIAESENA ISCAHVEAKGAPMGIGLVKIMGRLSGQIAVGAALAQNDVNFVLIPEVPFDLEGENGLFKALEKRLIRRKHCVILVAEGAG QELMRTNNTPQETDASGNIRLLDIGYFLKVRIEDYFKKAGIQINLKYIDPSYMIRSVRASASDSIYCSALGQYAVHAGMA GKTGMLVGLLKDEYVHLPIRVVTSGKQIDPEGNLWMRVLESTGQPPSLLNKPLDPPVEEHVVI
Sequences:
>Translated_463_residues MRHGRINGFMKKVQQEDYIIQNLGECAIQSPVIVNDFTPDSKRLLLKQYLDYSNTGKNKDEKVKREIPLSVEVAGPREKI FFDPSKTKAAIVTCGGLCPGINDVIRAIVMQLYHRYGVRNIIGIKYGFQGLIPSYGHEIVELTPESVENIHREGGSILSS SRGQQNIGEMVDALSRMNVNIFFCIGGDGTMRAAERITEEITRRKLSISLIGIPKTIDNDLNFVQKTFGFDTAIAESENA ISCAHVEAKGAPMGIGLVKIMGRLSGQIAVGAALAQNDVNFVLIPEVPFDLEGENGLFKALEKRLIRRKHCVILVAEGAG QELMRTNNTPQETDASGNIRLLDIGYFLKVRIEDYFKKAGIQINLKYIDPSYMIRSVRASASDSIYCSALGQYAVHAGMA GKTGMLVGLLKDEYVHLPIRVVTSGKQIDPEGNLWMRVLESTGQPPSLLNKPLDPPVEEHVVI >Mature_463_residues MRHGRINGFMKKVQQEDYIIQNLGECAIQSPVIVNDFTPDSKRLLLKQYLDYSNTGKNKDEKVKREIPLSVEVAGPREKI FFDPSKTKAAIVTCGGLCPGINDVIRAIVMQLYHRYGVRNIIGIKYGFQGLIPSYGHEIVELTPESVENIHREGGSILSS SRGQQNIGEMVDALSRMNVNIFFCIGGDGTMRAAERITEEITRRKLSISLIGIPKTIDNDLNFVQKTFGFDTAIAESENA ISCAHVEAKGAPMGIGLVKIMGRLSGQIAVGAALAQNDVNFVLIPEVPFDLEGENGLFKALEKRLIRRKHCVILVAEGAG QELMRTNNTPQETDASGNIRLLDIGYFLKVRIEDYFKKAGIQINLKYIDPSYMIRSVRASASDSIYCSALGQYAVHAGMA GKTGMLVGLLKDEYVHLPIRVVTSGKQIDPEGNLWMRVLESTGQPPSLLNKPLDPPVEEHVVI
Specific function: Key control step of glycolysis. [C]
COG id: COG0205
COG function: function code G; 6-phosphofructokinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphofructokinase family [H]
Homologues:
Organism=Homo sapiens, GI266453619, Length=359, Percent_Identity=25.9052924791086, Blast_Score=87, Evalue=4e-17, Organism=Homo sapiens, GI266453768, Length=359, Percent_Identity=25.9052924791086, Blast_Score=86, Evalue=7e-17, Organism=Homo sapiens, GI266453748, Length=359, Percent_Identity=25.9052924791086, Blast_Score=86, Evalue=7e-17, Organism=Homo sapiens, GI4505749, Length=359, Percent_Identity=25.9052924791086, Blast_Score=86, Evalue=7e-17, Organism=Homo sapiens, GI11321601, Length=309, Percent_Identity=27.1844660194175, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI48762920, Length=369, Percent_Identity=24.6612466124661, Blast_Score=72, Evalue=1e-12, Organism=Escherichia coli, GI1790350, Length=338, Percent_Identity=27.2189349112426, Blast_Score=94, Evalue=2e-20, Organism=Caenorhabditis elegans, GI25147584, Length=254, Percent_Identity=29.5275590551181, Blast_Score=82, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17558788, Length=299, Percent_Identity=28.0936454849498, Blast_Score=74, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6321679, Length=359, Percent_Identity=23.3983286908078, Blast_Score=77, Evalue=8e-15, Organism=Saccharomyces cerevisiae, GI6323861, Length=254, Percent_Identity=26.7716535433071, Blast_Score=76, Evalue=1e-14, Organism=Drosophila melanogaster, GI28573326, Length=257, Percent_Identity=28.7937743190661, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI17647809, Length=261, Percent_Identity=28.735632183908, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI24652337, Length=257, Percent_Identity=28.7937743190661, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: 3981 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 950 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012003 - InterPro: IPR012829 - InterPro: IPR022953 - InterPro: IPR015912 - InterPro: IPR000023 [H]
Pfam domain/function: PF00365 PFK [H]
EC number: =2.7.1.90 [H]
Molecular weight: Translated: 51087; Mature: 51087
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHGRINGFMKKVQQEDYIIQNLGECAIQSPVIVNDFTPDSKRLLLKQYLDYSNTGKNKD CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCCCCCCCHH EKVKREIPLSVEVAGPREKIFFDPSKTKAAIVTCGGLCPGINDVIRAIVMQLYHRYGVRN HHHHHHCCEEEEECCCCCEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCC IIGIKYGFQGLIPSYGHEIVELTPESVENIHREGGSILSSSRGQQNIGEMVDALSRMNVN EEEEECCCCCCCCCCCCCEEEECHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHCCCE IFFCIGGDGTMRAAERITEEITRRKLSISLIGIPKTIDNDLNFVQKTFGFDTAIAESENA EEEEECCCCHHHHHHHHHHHHHHHEEEEEEEECCCHHCHHHHHHHHHHCCCHHHCCCCCC ISCAHVEAKGAPMGIGLVKIMGRLSGQIAVGAALAQNDVNFVLIPEVPFDLEGENGLFKA EEEEEEECCCCCCCHHHHHHHHHHCCCEEEEHHHHCCCCCEEEECCCCCCCCCCCCHHHH LEKRLIRRKHCVILVAEGAGQELMRTNNTPQETDASGNIRLLDIGYFLKVRIEDYFKKAG HHHHHHCCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCEEEEEECEEEEEEEHHHHHHCC IQINLKYIDPSYMIRSVRASASDSIYCSALGQYAVHAGMAGKTGMLVGLLKDEYVHLPIR CEEEEEEECHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEEE VVTSGKQIDPEGNLWMRVLESTGQPPSLLNKPLDPPVEEHVVI EEECCCEECCCCHHHHHHHHHCCCCHHHHCCCCCCCHHHCCCC >Mature Secondary Structure MRHGRINGFMKKVQQEDYIIQNLGECAIQSPVIVNDFTPDSKRLLLKQYLDYSNTGKNKD CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCCCCCCCHH EKVKREIPLSVEVAGPREKIFFDPSKTKAAIVTCGGLCPGINDVIRAIVMQLYHRYGVRN HHHHHHCCEEEEECCCCCEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCC IIGIKYGFQGLIPSYGHEIVELTPESVENIHREGGSILSSSRGQQNIGEMVDALSRMNVN EEEEECCCCCCCCCCCCCEEEECHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHCCCE IFFCIGGDGTMRAAERITEEITRRKLSISLIGIPKTIDNDLNFVQKTFGFDTAIAESENA EEEEECCCCHHHHHHHHHHHHHHHEEEEEEEECCCHHCHHHHHHHHHHCCCHHHCCCCCC ISCAHVEAKGAPMGIGLVKIMGRLSGQIAVGAALAQNDVNFVLIPEVPFDLEGENGLFKA EEEEEEECCCCCCCHHHHHHHHHHCCCEEEEHHHHCCCCCEEEECCCCCCCCCCCCHHHH LEKRLIRRKHCVILVAEGAGQELMRTNNTPQETDASGNIRLLDIGYFLKVRIEDYFKKAG HHHHHHCCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCEEEEEECEEEEEEEHHHHHHCC IQINLKYIDPSYMIRSVRASASDSIYCSALGQYAVHAGMAGKTGMLVGLLKDEYVHLPIR CEEEEEEECHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEEE VVTSGKQIDPEGNLWMRVLESTGQPPSLLNKPLDPPVEEHVVI EEECCCEECCCCHHHHHHHHHCCCCHHHHCCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10913106 [H]