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The map label for this gene is 85859458

Identifier: 85859458

GI number: 85859458

Start: 1665114

End: 1665833

Strand: Direct

Name: 85859458

Synonym: SYN_00895

Alternate gene names: NA

Gene position: 1665114-1665833 (Clockwise)

Preceding gene: 85859457

Following gene: 85859464

Centisome position: 52.37

GC content: 46.67

Gene sequence:

>720_bases
ATGAAATACATTGAGCGAACATACCGAAATCAGATTTCATGTAAATTTCTGACATCGTTTCATGTCTGTGAAGAACAGAC
CGATCTTTTTATTCAGGCGGATCAGGATCTGACAAATAACGCGGCAGCCTCTGTACATCATTACCGCACTCATCTCAAAT
ACTACATGCAGTCTCACCCTGAATTTGTTACATCCTTCAGACCATTGCCTGAAGATGATCTGGCCCCGCCGATTGTGAAG
GCCATGCTGAAGGCCAGTAGATACGCCGGTGTTGGTCCTTTAGCTGCGGTGGCGGGGGCCGTCGCGGAATTTGTGGGGCG
GGATCTTATGAACTCTTCATCCCAGGTCGTTGTTGAAAATGGAGGAGATATTTTTCTCAATGCGTCGCAAGAATTAAACA
TTGCCGTTTTTGCGGGTGATTCACCCTTGAGTTATCAAATCGCCTTAAGGATAAAACCAGGTGACACACCGCTGGGTATT
TGCACCTCATCGGGAACGGTTGGTCATTCAATCAGCTTTGGAAAAGCAGATGCCGTATGCGTGAAAGCCAAATCAGCTGC
TCTTGCTGATGCTGCGGCGACGGCTATTGGGAATCGAGTCATGAATAAAGCCGATATAAAACATGCCCTCGAATCGGGAG
CTCTCATTCAGGGTGTCCTGGGAATATTGATTATTCTGGAGAAACAGATGGGCGTAATCGGAGATATGGAACTGATATAA

Upstream 100 bases:

>100_bases
AAGATCTATCTCGGTGACAAGGCAAAGTTATCCATCAGCCCGGAATTAAAGAGAGAAGCCAATATAATTCTTGGAGAAGG
GGTGATGATTTTCATGTAAG

Downstream 100 bases:

>100_bases
AAATAGTCCTTCTGGTTTACATAATATATCTTATAGGACAAAGAGATTATTTCTACAGACCTTCCTCAGCAAGTGACTTA
ATCAGCGCCGCCTGCCTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MKYIERTYRNQISCKFLTSFHVCEEQTDLFIQADQDLTNNAAASVHHYRTHLKYYMQSHPEFVTSFRPLPEDDLAPPIVK
AMLKASRYAGVGPLAAVAGAVAEFVGRDLMNSSSQVVVENGGDIFLNASQELNIAVFAGDSPLSYQIALRIKPGDTPLGI
CTSSGTVGHSISFGKADAVCVKAKSAALADAAATAIGNRVMNKADIKHALESGALIQGVLGILIILEKQMGVIGDMELI

Sequences:

>Translated_239_residues
MKYIERTYRNQISCKFLTSFHVCEEQTDLFIQADQDLTNNAAASVHHYRTHLKYYMQSHPEFVTSFRPLPEDDLAPPIVK
AMLKASRYAGVGPLAAVAGAVAEFVGRDLMNSSSQVVVENGGDIFLNASQELNIAVFAGDSPLSYQIALRIKPGDTPLGI
CTSSGTVGHSISFGKADAVCVKAKSAALADAAATAIGNRVMNKADIKHALESGALIQGVLGILIILEKQMGVIGDMELI
>Mature_239_residues
MKYIERTYRNQISCKFLTSFHVCEEQTDLFIQADQDLTNNAAASVHHYRTHLKYYMQSHPEFVTSFRPLPEDDLAPPIVK
AMLKASRYAGVGPLAAVAGAVAEFVGRDLMNSSSQVVVENGGDIFLNASQELNIAVFAGDSPLSYQIALRIKPGDTPLGI
CTSSGTVGHSISFGKADAVCVKAKSAALADAAATAIGNRVMNKADIKHALESGALIQGVLGILIILEKQMGVIGDMELI

Specific function: Unknown

COG id: COG2122

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0280 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023156
- InterPro:   IPR003374
- InterPro:   IPR007183 [H]

Pfam domain/function: PF02424 ApbE [H]

EC number: NA

Molecular weight: Translated: 25598; Mature: 25598

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYIERTYRNQISCKFLTSFHVCEEQTDLFIQADQDLTNNAAASVHHYRTHLKYYMQSHP
CCHHHHHHHCCCEEEEEHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCH
EFVTSFRPLPEDDLAPPIVKAMLKASRYAGVGPLAAVAGAVAEFVGRDLMNSSSQVVVEN
HHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEC
GGDIFLNASQELNIAVFAGDSPLSYQIALRIKPGDTPLGICTSSGTVGHSISFGKADAVC
CCEEEEECCCCEEEEEEECCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEE
VKAKSAALADAAATAIGNRVMNKADIKHALESGALIQGVLGILIILEKQMGVIGDMELI
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKYIERTYRNQISCKFLTSFHVCEEQTDLFIQADQDLTNNAAASVHHYRTHLKYYMQSHP
CCHHHHHHHCCCEEEEEHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCH
EFVTSFRPLPEDDLAPPIVKAMLKASRYAGVGPLAAVAGAVAEFVGRDLMNSSSQVVVEN
HHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEC
GGDIFLNASQELNIAVFAGDSPLSYQIALRIKPGDTPLGICTSSGTVGHSISFGKADAVC
CCEEEEECCCCEEEEEEECCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEE
VKAKSAALADAAATAIGNRVMNKADIKHALESGALIQGVLGILIILEKQMGVIGDMELI
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA