| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is guaB [H]
Identifier: 85859456
GI number: 85859456
Start: 1660157
End: 1661617
Strand: Direct
Name: guaB [H]
Synonym: SYN_00897
Alternate gene names: 85859456
Gene position: 1660157-1661617 (Clockwise)
Preceding gene: 85859455
Following gene: 85859457
Centisome position: 52.22
GC content: 50.44
Gene sequence:
>1461_bases ATGTTAGATGATCATGTAAGACAAGCATTCACATTTGATGATTTACTGCTTTTACCGTCGGAATCACAAATACTCCCTCG TGATGCAGACCTTTCGACGTGGCTTACGAATCGGATAGCCCTGAAAATACCAATCGTTGCGGCTGCAATGGATACGGTCA CAGAGTCTGCCACAGCCATTTGCCTCGCCCGCGAGGGGGGGATCGGTATTATTCACCGCAATATGAGCATTGAAAGGCAG GTCCTTGAAGTCGACAAGGTTAAAAAGTCGGAGAGCGGAATGATTGTCGATCCGATTACCATCGAACCCGAACAGAAAGT CAGTGAAGCCCTTGATTTGATGCATCGCTACAAAATATCCGGTGTCCCCGTGGTTAAAAATAAAAAACTTGTGGGTATTC TGACAAACCGTGATCTGCGCTTCGAAGAGAATCTGCATCAGCCGGTATCAAACGTCATGACCAGGGAAAATCTGGTGACG GTGTCCGCCAACATCTCTCTGGAAGAATCCAAAAGACTGCTTCATAAACATCGGATTGAAAAACTTCTGGTGGTTGATGA ATCCTATAACCTGAAAGGCTTGATAACGATCAAGGATATTGAAAAGATCAAAAAATATCCCAATGCCTGTAAAGATTCCC TCGGACGGCTGCGAGCGGGGGCAGCCGTAGGAATCCTGGACCGGGAAGCACGGGTTGACGCCCTGTTGAATGCTGGTGTG GATGTGATTGTAATCGATACCTCTCATGGTCACTCAAAAGGTGTTCTCGACGCAGTGAGGGATACAAAGAGCAATTTCCC CAATTGTGAACTGGTCGCGGGCAATGTAGCCACCGCAGAGGGAGCGCAGGCCCTGATCGACGCGGGTGTCGATGCCGTGA AGGTTGGCGTGGGACCCGGATCCATCTGCACGACGCGCATCATCGCCGGTGTAGGGGTTCCTCAAATCACCGCAATCGCG GACGCATACAGGGTATGTGCCCGCAATAATATCCCGGTTATCGCCGATGGTGGGATAAAATTCTCCGGAGACATCGTTAA AGCGCTCGCCGCGGGAGCCCATTCCGTCATGATCGGCGGTCTTTTCGCGGGAACCGAAGAAAGTCCCGGAGAAACCATCC TGTTTCAGGGGAGAAGTTATAAGGTCTATCGCGGCATGGGATCGCTTGAAGCCATGAAAATGGGCAGTCGGGATCGTTAT TACCAGGACGATATAGAAAGCAACCTGAAGCTCGTTCCTGAAGGCATAGAGGGCAGGGTGCCTTTTCGAGGCTCATTGTC CGCAAGTATCCACCAATTGAAAGGCGGAGTCCTGGCCGGCATGGGTTATGTGGGATGCCGGACAATAAAGGAACTGAGGG AGAAAGCGCGCTTCACAAAGATTACATCGGCAGGCCTTCGGGAAAGCCATGTCCATGACGTGATCATTACAAAGGAAGCA CCTAATTACTGGCTTGATTGA
Upstream 100 bases:
>100_bases AAAGACGACGAGAGCCGACTGCCATAGTTTATTTTTTCAAATTTGAGCTGCTCAGAAGGGGCTGGAGCCATGAGTCGCTT TTCCTTCCCGGAGGTTTAAT
Downstream 100 bases:
>100_bases AAACCAGAACTTTGAAAGTAACATCCGATGAAAATTGAAACGTTTGTTCACCTCCATGTCCATACGCAGTACAGTCTGCT TGACGGCACCATCCGGATCA
Product: inosine-5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 486; Mature: 486
Protein sequence:
>486_residues MLDDHVRQAFTFDDLLLLPSESQILPRDADLSTWLTNRIALKIPIVAAAMDTVTESATAICLAREGGIGIIHRNMSIERQ VLEVDKVKKSESGMIVDPITIEPEQKVSEALDLMHRYKISGVPVVKNKKLVGILTNRDLRFEENLHQPVSNVMTRENLVT VSANISLEESKRLLHKHRIEKLLVVDESYNLKGLITIKDIEKIKKYPNACKDSLGRLRAGAAVGILDREARVDALLNAGV DVIVIDTSHGHSKGVLDAVRDTKSNFPNCELVAGNVATAEGAQALIDAGVDAVKVGVGPGSICTTRIIAGVGVPQITAIA DAYRVCARNNIPVIADGGIKFSGDIVKALAAGAHSVMIGGLFAGTEESPGETILFQGRSYKVYRGMGSLEAMKMGSRDRY YQDDIESNLKLVPEGIEGRVPFRGSLSASIHQLKGGVLAGMGYVGCRTIKELREKARFTKITSAGLRESHVHDVIITKEA PNYWLD
Sequences:
>Translated_486_residues MLDDHVRQAFTFDDLLLLPSESQILPRDADLSTWLTNRIALKIPIVAAAMDTVTESATAICLAREGGIGIIHRNMSIERQ VLEVDKVKKSESGMIVDPITIEPEQKVSEALDLMHRYKISGVPVVKNKKLVGILTNRDLRFEENLHQPVSNVMTRENLVT VSANISLEESKRLLHKHRIEKLLVVDESYNLKGLITIKDIEKIKKYPNACKDSLGRLRAGAAVGILDREARVDALLNAGV DVIVIDTSHGHSKGVLDAVRDTKSNFPNCELVAGNVATAEGAQALIDAGVDAVKVGVGPGSICTTRIIAGVGVPQITAIA DAYRVCARNNIPVIADGGIKFSGDIVKALAAGAHSVMIGGLFAGTEESPGETILFQGRSYKVYRGMGSLEAMKMGSRDRY YQDDIESNLKLVPEGIEGRVPFRGSLSASIHQLKGGVLAGMGYVGCRTIKELREKARFTKITSAGLRESHVHDVIITKEA PNYWLD >Mature_486_residues MLDDHVRQAFTFDDLLLLPSESQILPRDADLSTWLTNRIALKIPIVAAAMDTVTESATAICLAREGGIGIIHRNMSIERQ VLEVDKVKKSESGMIVDPITIEPEQKVSEALDLMHRYKISGVPVVKNKKLVGILTNRDLRFEENLHQPVSNVMTRENLVT VSANISLEESKRLLHKHRIEKLLVVDESYNLKGLITIKDIEKIKKYPNACKDSLGRLRAGAAVGILDREARVDALLNAGV DVIVIDTSHGHSKGVLDAVRDTKSNFPNCELVAGNVATAEGAQALIDAGVDAVKVGVGPGSICTTRIIAGVGVPQITAIA DAYRVCARNNIPVIADGGIKFSGDIVKALAAGAHSVMIGGLFAGTEESPGETILFQGRSYKVYRGMGSLEAMKMGSRDRY YQDDIESNLKLVPEGIEGRVPFRGSLSASIHQLKGGVLAGMGYVGCRTIKELREKARFTKITSAGLRESHVHDVIITKEA PNYWLD
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI66933016, Length=480, Percent_Identity=39.375, Blast_Score=327, Evalue=2e-89, Organism=Homo sapiens, GI217035146, Length=478, Percent_Identity=39.9581589958159, Blast_Score=322, Evalue=5e-88, Organism=Homo sapiens, GI34328928, Length=478, Percent_Identity=39.9581589958159, Blast_Score=321, Evalue=9e-88, Organism=Homo sapiens, GI156616279, Length=478, Percent_Identity=39.9581589958159, Blast_Score=321, Evalue=1e-87, Organism=Homo sapiens, GI34328930, Length=478, Percent_Identity=39.9581589958159, Blast_Score=320, Evalue=1e-87, Organism=Homo sapiens, GI217035152, Length=484, Percent_Identity=39.8760330578512, Blast_Score=317, Evalue=1e-86, Organism=Homo sapiens, GI217035148, Length=478, Percent_Identity=39.1213389121339, Blast_Score=310, Evalue=2e-84, Organism=Homo sapiens, GI217035150, Length=478, Percent_Identity=37.0292887029289, Blast_Score=285, Evalue=7e-77, Organism=Homo sapiens, GI50541954, Length=253, Percent_Identity=37.5494071146245, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI50541952, Length=253, Percent_Identity=37.5494071146245, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI50541948, Length=253, Percent_Identity=37.5494071146245, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI50541956, Length=253, Percent_Identity=37.5494071146245, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI156104880, Length=225, Percent_Identity=36.8888888888889, Blast_Score=144, Evalue=2e-34, Organism=Escherichia coli, GI1788855, Length=482, Percent_Identity=59.1286307053942, Blast_Score=520, Evalue=1e-149, Organism=Escherichia coli, GI1786293, Length=346, Percent_Identity=27.7456647398844, Blast_Score=140, Evalue=2e-34, Organism=Caenorhabditis elegans, GI71994385, Length=500, Percent_Identity=35.4, Blast_Score=273, Evalue=1e-73, Organism=Caenorhabditis elegans, GI71994389, Length=422, Percent_Identity=36.7298578199052, Blast_Score=252, Evalue=3e-67, Organism=Caenorhabditis elegans, GI17560440, Length=241, Percent_Identity=36.5145228215768, Blast_Score=158, Evalue=6e-39, Organism=Saccharomyces cerevisiae, GI6322012, Length=494, Percent_Identity=39.8785425101215, Blast_Score=326, Evalue=6e-90, Organism=Saccharomyces cerevisiae, GI6323585, Length=495, Percent_Identity=38.989898989899, Blast_Score=315, Evalue=1e-86, Organism=Saccharomyces cerevisiae, GI6323464, Length=494, Percent_Identity=40.080971659919, Blast_Score=311, Evalue=2e-85, Organism=Saccharomyces cerevisiae, GI6319352, Length=349, Percent_Identity=39.8280802292264, Blast_Score=239, Evalue=5e-64, Organism=Saccharomyces cerevisiae, GI6319353, Length=141, Percent_Identity=39.0070921985816, Blast_Score=83, Evalue=9e-17, Organism=Drosophila melanogaster, GI24641071, Length=486, Percent_Identity=39.3004115226337, Blast_Score=322, Evalue=3e-88, Organism=Drosophila melanogaster, GI24641073, Length=486, Percent_Identity=39.3004115226337, Blast_Score=322, Evalue=3e-88, Organism=Drosophila melanogaster, GI28571163, Length=444, Percent_Identity=40.0900900900901, Blast_Score=291, Evalue=5e-79,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 52743; Mature: 52743
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDDHVRQAFTFDDLLLLPSESQILPRDADLSTWLTNRIALKIPIVAAAMDTVTESATAI CCCHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHCCEEEEEEHHHHHHHHHHCCCEEE CLAREGGIGIIHRNMSIERQVLEVDKVKKSESGMIVDPITIEPEQKVSEALDLMHRYKIS EEEECCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEECEEECCHHHHHHHHHHHHHHHCC GVPVVKNKKLVGILTNRDLRFEENLHQPVSNVMTRENLVTVSANISLEESKRLLHKHRIE CCCEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHC KLLVVDESYNLKGLITIKDIEKIKKYPNACKDSLGRLRAGAAVGILDREARVDALLNAGV EEEEEECCCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCC DVIVIDTSHGHSKGVLDAVRDTKSNFPNCELVAGNVATAEGAQALIDAGVDAVKVGVGPG EEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHCCCCEEEECCCCC SICTTRIIAGVGVPQITAIADAYRVCARNNIPVIADGGIKFSGDIVKALAAGAHSVMIGG HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEECCCEEECHHHHHHHHCCCCCEEEEE LFAGTEESPGETILFQGRSYKVYRGMGSLEAMKMGSRDRYYQDDIESNLKLVPEGIEGRV EEECCCCCCCCEEEEECCCEEEEECCCCHHHHHCCCCCCCCHHHHHCCCEEECCCCCCCC PFRGSLSASIHQLKGGVLAGMGYVGCRTIKELREKARFTKITSAGLRESHVHDVIITKEA CCCCCCHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC PNYWLD CCCCCC >Mature Secondary Structure MLDDHVRQAFTFDDLLLLPSESQILPRDADLSTWLTNRIALKIPIVAAAMDTVTESATAI CCCHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHCCEEEEEEHHHHHHHHHHCCCEEE CLAREGGIGIIHRNMSIERQVLEVDKVKKSESGMIVDPITIEPEQKVSEALDLMHRYKIS EEEECCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEECEEECCHHHHHHHHHHHHHHHCC GVPVVKNKKLVGILTNRDLRFEENLHQPVSNVMTRENLVTVSANISLEESKRLLHKHRIE CCCEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHC KLLVVDESYNLKGLITIKDIEKIKKYPNACKDSLGRLRAGAAVGILDREARVDALLNAGV EEEEEECCCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCC DVIVIDTSHGHSKGVLDAVRDTKSNFPNCELVAGNVATAEGAQALIDAGVDAVKVGVGPG EEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHCCCCEEEECCCCC SICTTRIIAGVGVPQITAIADAYRVCARNNIPVIADGGIKFSGDIVKALAAGAHSVMIGG HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEECCCEEECHHHHHHHHCCCCCEEEEE LFAGTEESPGETILFQGRSYKVYRGMGSLEAMKMGSRDRYYQDDIESNLKLVPEGIEGRV EEECCCCCCCCEEEEECCCEEEEECCCCHHHHHCCCCCCCCHHHHHCCCEEECCCCCCCC PFRGSLSASIHQLKGGVLAGMGYVGCRTIKELREKARFTKITSAGLRESHVHDVIITKEA CCCCCCHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC PNYWLD CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]