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The map label for this gene is tsf

Identifier: 85859431

GI number: 85859431

Start: 1636927

End: 1637532

Strand: Direct

Name: tsf

Synonym: SYN_03145

Alternate gene names: 85859431

Gene position: 1636927-1637532 (Clockwise)

Preceding gene: 85859430

Following gene: 85859432

Centisome position: 51.49

GC content: 44.39

Gene sequence:

>606_bases
GTGGGTATTACATCAGCAATGGTCAAAGAATTGAGAACGAAAACGGGGGCGGGAATGATGGACTGCAAAGAAGCCCTGAC
TTCGTCCAATGGAGATTTTGAAAAAGCGATAGATTATCTGCGGAAGAAGGGCATGTCTGCGGCAACGAAGCGCTCTTCCA
AGGCAGCAAAGGAAGGAACCATCGCCTCCTACATCCATATGGGAGGAAGAATCGGTGTGATGGTTGAGCTGAACTGTGAA
ACGGACTTTGTCGCAAAGACAGAAGATTTTAAGAATACGGCAAAAGATATCGCCATGCATGTGGCTGCCTCCAACCCGAC
TTATGTGAATCCCGATGAAATTCCGGAAGAAGCTCTGGAAAGAGAAAAGGAAATCTATCGAAGTCAAGCCCTGGCTGAGA
AAAAACCGGAGAAGATCTGGGATAAAATCATCGAAGGAAAACTCAATAAGTATTACGAGGAAGTATGCCTGACCAAACAG
AAATTCATCAAAAATACGGATATCACTATTGAAACCCTCATCAATAATCTGATTGCCAAGACCGGCGAAAATGTCATTAT
TCGACGTTTCGCCCGTTATCAGCTCGGAGAGGAACTCAAAAAATAA

Upstream 100 bases:

>100_bases
GGATATACCTGAAAGCATTGAGACCAAGGAAAGCGTCTCTGCTGCAGCGGATTCCGATCTGGACGAAAACGAGTAGCGAA
ATGTAGAGGAGGAATATAAA

Downstream 100 bases:

>100_bases
TTTTTTGCAGGAAATTCCTGATATTTAAAGGAATACGTTAAAGGCAAGTGGTCAATTTCTTGGAAAAGCCGGTTTATAAA
AGGGTCCTGCTGAAGCTCAG

Product: translation elongation factor Ts

Products: NA

Alternate protein names: EF-Ts

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MGITSAMVKELRTKTGAGMMDCKEALTSSNGDFEKAIDYLRKKGMSAATKRSSKAAKEGTIASYIHMGGRIGVMVELNCE
TDFVAKTEDFKNTAKDIAMHVAASNPTYVNPDEIPEEALEREKEIYRSQALAEKKPEKIWDKIIEGKLNKYYEEVCLTKQ
KFIKNTDITIETLINNLIAKTGENVIIRRFARYQLGEELKK

Sequences:

>Translated_201_residues
MGITSAMVKELRTKTGAGMMDCKEALTSSNGDFEKAIDYLRKKGMSAATKRSSKAAKEGTIASYIHMGGRIGVMVELNCE
TDFVAKTEDFKNTAKDIAMHVAASNPTYVNPDEIPEEALEREKEIYRSQALAEKKPEKIWDKIIEGKLNKYYEEVCLTKQ
KFIKNTDITIETLINNLIAKTGENVIIRRFARYQLGEELKK
>Mature_200_residues
GITSAMVKELRTKTGAGMMDCKEALTSSNGDFEKAIDYLRKKGMSAATKRSSKAAKEGTIASYIHMGGRIGVMVELNCET
DFVAKTEDFKNTAKDIAMHVAASNPTYVNPDEIPEEALEREKEIYRSQALAEKKPEKIWDKIIEGKLNKYYEEVCLTKQK
FIKNTDITIETLINNLIAKTGENVIIRRFARYQLGEELKK

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family

Homologues:

Organism=Homo sapiens, GI291084500, Length=189, Percent_Identity=26.4550264550265, Blast_Score=66, Evalue=2e-11,
Organism=Escherichia coli, GI1786366, Length=95, Percent_Identity=49.4736842105263, Blast_Score=96, Evalue=1e-21,
Organism=Drosophila melanogaster, GI19921466, Length=101, Percent_Identity=39.6039603960396, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): EFTS_SYNAS (Q2LTQ6)

Other databases:

- EMBL:   CP000252
- RefSeq:   YP_461633.1
- ProteinModelPortal:   Q2LTQ6
- SMR:   Q2LTQ6
- STRING:   Q2LTQ6
- GeneID:   3883139
- GenomeReviews:   CP000252_GR
- KEGG:   sat:SYN_03145
- NMPDR:   fig|56780.10.peg.1575
- eggNOG:   COG0264
- HOGENOM:   HBG713289
- OMA:   NVEYVSI
- BioCyc:   SACI56780:SYN_03145-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00050
- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449
- Gene3D:   G3DSA:3.30.479.20
- PANTHER:   PTHR11741
- TIGRFAMs:   TIGR00116

Pfam domain/function: PF00889 EF_TS; PF00627 UBA; SSF54713 EF_TS; SSF46934 UBA_like

EC number: NA

Molecular weight: Translated: 22639; Mature: 22508

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: PS01126 EF_TS_1; PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGITSAMVKELRTKTGAGMMDCKEALTSSNGDFEKAIDYLRKKGMSAATKRSSKAAKEGT
CCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCH
IASYIHMGGRIGVMVELNCETDFVAKTEDFKNTAKDIAMHVAASNPTYVNPDEIPEEALE
HHHHHHCCCCEEEEEEECCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHCHHHHHH
REKEIYRSQALAEKKPEKIWDKIIEGKLNKYYEEVCLTKQKFIKNTDITIETLINNLIAK
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
TGENVIIRRFARYQLGEELKK
CCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GITSAMVKELRTKTGAGMMDCKEALTSSNGDFEKAIDYLRKKGMSAATKRSSKAAKEGT
CHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCH
IASYIHMGGRIGVMVELNCETDFVAKTEDFKNTAKDIAMHVAASNPTYVNPDEIPEEALE
HHHHHHCCCCEEEEEEECCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHCHHHHHH
REKEIYRSQALAEKKPEKIWDKIIEGKLNKYYEEVCLTKQKFIKNTDITIETLINNLIAK
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
TGENVIIRRFARYQLGEELKK
CCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA