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The map label for this gene is 85859396

Identifier: 85859396

GI number: 85859396

Start: 1603016

End: 1603807

Strand: Direct

Name: 85859396

Synonym: SYN_02178

Alternate gene names: NA

Gene position: 1603016-1603807 (Clockwise)

Preceding gene: 85859395

Following gene: 85859397

Centisome position: 50.42

GC content: 50.88

Gene sequence:

>792_bases
GTGATTGAGATGAACGAATCGGATATCTTGAAAGACGAATTGTACACGCTGGTCCGTTCCTTAAAAAACCAGATCGAGCT
TGCGTGGGAACTTCGACATCCTTTATCGTGGACGACGGCGGAGGGAGATCAGAAATCGCCATTCCTCGGAATGAAGCTGG
CCTCAGGGGTGCATGAACAAGATGTGAAGGAATCGTTGATCTCCTCCGACATCACCGGTCCAGCGGACAATCCCCTGGAA
ACACTGGATGATATTCGACGTGACATGGAAGCGTGCCATCGCTGTCCCCTTGAAAAAACGCGGAAAAATCTTGTCTTCGG
CGAAGGCAATCCCCACTCGGAACTGGTTTTCGTGGGAGAAGCGCCCGGCGCCGACGAAGATCTTCAGGGAAGGCCCTTTG
TGGGACGCGCCGGTCATCTCCTGACCAGAATTATCGATGCCATGGGACTGAAAAGGGAGGATGTCTATATCTGCAACATC
CTGAAATGCCGTCCTCCGGGAAATCGAAATCCCCTGCCCGAAGAAATCGAAGTTTGTGAACCCTGGCTGATCCGACAGCT
GGAAGCGATCCGTCCACGGATAATCTGCGCTCTGGGCACCTTTGCGGCTCAGACCCTTCTCAAAAAGAAGGGAATTCCTA
TTACCGTTCTTCGTGGACAGTTTCATGACTATCATGGAATTAAACTGATGCCTACCTACCATCCCGCATATCTTCTGAGG
AATCCGGGAGCAAAAAGGCAGGTTTGGGAAGATGTACAGAAAATCATGAAAGTTCTGGAAGCGGGTCAATAA

Upstream 100 bases:

>100_bases
GAAGATCCGGAACAGTCAGCTTAACAATCCCGAAAAAGAGCGGGATCCTTTTTCTGCTTCGTGGAAGACCGCCGGCGATA
AAGACCACCTCCAATGAGTC

Downstream 100 bases:

>100_bases
ATGGAAAACAGGATGAAACGCTTACGTCAAATCTTTGCTTTTTTGTCGGGATTGCTCATTTTTTTCATGCTCCTGGGAAT
CTGCTTTGCGGCCCATGACG

Product: uracil DNA glycosylase superfamily protein

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase; Uracil DNA Glycosylase Superfamily Protein; DNA-Directed DNA Polymerase; DNA Polymerase Bacteriophage-Type; Phage Spo1 DNA Polymerase-Related Protein; DNA Polymerase-Related Protein Bacteriophage-Type; DNA Glycosylase; Uracil-DNA Glycosylase Family 4 Protein; Bacteriophage-Related DNA Polymerase; Phage DNA Polymerase; DNA Polymerase-Related Protein; Phage SPO1 DNA Polymerase Domain-Containing Protein; Phage Related DNA Polymerase; Uracil-DNA Glycosylase C-Terminal; Phage SpO1 DNA Polymerase-Related Protein; Bacteriophage-Type DNA Polymerase; DNA Polymerase Related Protein; Phage DNA Polymerase-Related Protein; DNA-Directed DNA Polymerase Bacteriophage-Type; Uracil-DNA Glycosylase Phage-Related Protein; Phage Shock Protein E; C-Terminal Part Of DNA Polymerase Bacteriophage-Type; Phage Spo1 DNA Polymerase Domain Protein; Uracil-DNA Glycosylase C-Terminal Domain Protein; Uracil-DNA Glycosylase-Like Protein; Uracil-DNA Glycosylase-Related Protein; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein; N-Terminus Of Phage SPO1 DNA Polymerase

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MIEMNESDILKDELYTLVRSLKNQIELAWELRHPLSWTTAEGDQKSPFLGMKLASGVHEQDVKESLISSDITGPADNPLE
TLDDIRRDMEACHRCPLEKTRKNLVFGEGNPHSELVFVGEAPGADEDLQGRPFVGRAGHLLTRIIDAMGLKREDVYICNI
LKCRPPGNRNPLPEEIEVCEPWLIRQLEAIRPRIICALGTFAAQTLLKKKGIPITVLRGQFHDYHGIKLMPTYHPAYLLR
NPGAKRQVWEDVQKIMKVLEAGQ

Sequences:

>Translated_263_residues
MIEMNESDILKDELYTLVRSLKNQIELAWELRHPLSWTTAEGDQKSPFLGMKLASGVHEQDVKESLISSDITGPADNPLE
TLDDIRRDMEACHRCPLEKTRKNLVFGEGNPHSELVFVGEAPGADEDLQGRPFVGRAGHLLTRIIDAMGLKREDVYICNI
LKCRPPGNRNPLPEEIEVCEPWLIRQLEAIRPRIICALGTFAAQTLLKKKGIPITVLRGQFHDYHGIKLMPTYHPAYLLR
NPGAKRQVWEDVQKIMKVLEAGQ
>Mature_263_residues
MIEMNESDILKDELYTLVRSLKNQIELAWELRHPLSWTTAEGDQKSPFLGMKLASGVHEQDVKESLISSDITGPADNPLE
TLDDIRRDMEACHRCPLEKTRKNLVFGEGNPHSELVFVGEAPGADEDLQGRPFVGRAGHLLTRIIDAMGLKREDVYICNI
LKCRPPGNRNPLPEEIEVCEPWLIRQLEAIRPRIICALGTFAAQTLLKKKGIPITVLRGQFHDYHGIKLMPTYHPAYLLR
NPGAKRQVWEDVQKIMKVLEAGQ

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 29775; Mature: 29775

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEMNESDILKDELYTLVRSLKNQIELAWELRHPLSWTTAEGDQKSPFLGMKLASGVHEQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCHH
DVKESLISSDITGPADNPLETLDDIRRDMEACHRCPLEKTRKNLVFGEGNPHSELVFVGE
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCEEECCCCCCCCEEEEEC
APGADEDLQGRPFVGRAGHLLTRIIDAMGLKREDVYICNILKCRPPGNRNPLPEEIEVCE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCHHHHHCC
PWLIRQLEAIRPRIICALGTFAAQTLLKKKGIPITVLRGQFHDYHGIKLMPTYHPAYLLR
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEECCCCHHEEC
NPGAKRQVWEDVQKIMKVLEAGQ
CCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIEMNESDILKDELYTLVRSLKNQIELAWELRHPLSWTTAEGDQKSPFLGMKLASGVHEQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCHH
DVKESLISSDITGPADNPLETLDDIRRDMEACHRCPLEKTRKNLVFGEGNPHSELVFVGE
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCEEECCCCCCCCEEEEEC
APGADEDLQGRPFVGRAGHLLTRIIDAMGLKREDVYICNILKCRPPGNRNPLPEEIEVCE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCHHHHHCC
PWLIRQLEAIRPRIICALGTFAAQTLLKKKGIPITVLRGQFHDYHGIKLMPTYHPAYLLR
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEECCCCHHEEC
NPGAKRQVWEDVQKIMKVLEAGQ
CCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA