Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85859159

Identifier: 85859159

GI number: 85859159

Start: 1334058

End: 1335590

Strand: Direct

Name: 85859159

Synonym: SYN_02855

Alternate gene names: NA

Gene position: 1334058-1335590 (Clockwise)

Preceding gene: 85859158

Following gene: 85859162

Centisome position: 41.96

GC content: 58.9

Gene sequence:

>1533_bases
ATGAGGACAATTCTCTGCTTCAGGATATGGCCGGCGGCAATGGTTCTGATCTGTCTGATTGTCCTGTGCGGCAGGGCGGA
GGCGACGCCGGTGGCAGCGACCCTTTCCCCGGAATCGGCCCAGGTGACGGAAGTTTCCCGTCTGTCGGTTCGAATGGAGG
GCGGGGGAGAGGGCAGGGCGGTGTTGATTCTACCCGGCCCGGCTAAGCCCGAATCACTGAAAATCTTTCCGGTGGAAGAT
CCGGCACTGAAGATTTCCTCTCTTTCCTGGCGGGCCTTGACGGACAAAGGATCCGCAGTCAACGACGCAAAGCGGAAGCA
GCACCGGAGCCTGACGGCGGAACGAAATCGGCTGGCGGCGGAGATCAAGGGCCTGGAGGCGCGGATCGCCTTCTGGCAGT
CCCAGACAAAAGCGAAAACCAGATCGTTGAACGATGCCGTCAATCTTTCTGCAGTGATTTCCCGGAATACGAAAAAAGCC
TGGCAGGAAAAGATGACCCTGGAGGAGGAACGCGAAGAACTGGATCAGCGCATCGCGACTCTTCAGGCTGAGATGAAGAA
TCCCCGTGAAGCGGCAAAGGCGGACTGGGAAGTCAGCCTGTCTCTGTTGGGTTTGAAGCCGGAGAGCCGATCGATTATCT
TGAGATATTCCTATACCCTGTCCGACTGCGGCTGGAAGCCGCTCTATCGCCTTGAAGCCAATCCAGGGCAGGAACGCGTC
TCCTTTTCCTGGGAAGCCGAGGTCTGGCAGAACTCCCCTCATGACTGGGCCGGCGTGGAGCTATCCCTGGCGACCCACCC
GGAAGGGACTCCGACCGTTCCGGACAAAGCACCGGAGTGGCGAATCGGCGTGGAGAAAACAGGGGCTCGTCAGGCTTCAA
AGAAAACGGAAAAAACAGAAGCGGCAGGGACGCCGATGCGGAATCCCGTTGCCCCGTTTTTCCGTTTCCTGGGGACACGA
AGCGTCCCGGCAGGCCAAAAGGTGGTTCTTCCCGTGGAAAGCGCGAACTGGCCGGCTGTCTTTACCCGTATCCTGAAACC
ATTTTCCGGCCGGAATGCGGAGATGCGGGCAGTGATCACCCTGCCGTCACCCGTGACGATTCCGGAAAATCCGGCTTTGT
TTCTGAGGGACGGCGTATTGCTGGGCCGTCGGGAATTCGGTTTTTCCGGACGGGAGAAAAGTCTGCTTTTCGGGAGCTGT
CCGGATGTTCAGGCGGAGATCAACATGCTGTCGGAGCCGGGAAACGCGCCTGCATTCGATGCAAATAAACAGGTGTGGGA
TTGGCGCTGGCAGACGGTCGTAAAAAATGAAGGCGGCAAGCTGCTGAAAGTCCGGGTCGAAGAGCCCGTCCCTCAAATCC
GGGACCGCCGGATCACGTTCGCAATGACGGGAGAACCAGGTTATCCGGAAGAAAAAGCGGAGATGGGAGTGCGGGAACTG
GAGCTGCCGCCGGGCACCGGCCGGACGCTGGAAACCTTTCTCCACATCGCAGCGCCACGGGACTTGAATGTGGAGATGAG
CTGGACCCCCTGA

Upstream 100 bases:

>100_bases
AAGGAGATTACCGGCTTCTCAAGGGCTGGGAGGTTCAGCAGCTTCTGACGCCGCGAAAGAGGAGCGGATCGAAGATTCTG
CCGGAAAAGGAAAAATAAGA

Downstream 100 bases:

>100_bases
GCGGCTTCCTATCCCAGAGGTTTTCCTCCGTTTAGCTTTTCATAAATCCGGATATACTGGGCAATCATCGTCTGAAGGTC
GTATTTTTCACGGCATTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 510; Mature: 510

Protein sequence:

>510_residues
MRTILCFRIWPAAMVLICLIVLCGRAEATPVAATLSPESAQVTEVSRLSVRMEGGGEGRAVLILPGPAKPESLKIFPVED
PALKISSLSWRALTDKGSAVNDAKRKQHRSLTAERNRLAAEIKGLEARIAFWQSQTKAKTRSLNDAVNLSAVISRNTKKA
WQEKMTLEEEREELDQRIATLQAEMKNPREAAKADWEVSLSLLGLKPESRSIILRYSYTLSDCGWKPLYRLEANPGQERV
SFSWEAEVWQNSPHDWAGVELSLATHPEGTPTVPDKAPEWRIGVEKTGARQASKKTEKTEAAGTPMRNPVAPFFRFLGTR
SVPAGQKVVLPVESANWPAVFTRILKPFSGRNAEMRAVITLPSPVTIPENPALFLRDGVLLGRREFGFSGREKSLLFGSC
PDVQAEINMLSEPGNAPAFDANKQVWDWRWQTVVKNEGGKLLKVRVEEPVPQIRDRRITFAMTGEPGYPEEKAEMGVREL
ELPPGTGRTLETFLHIAAPRDLNVEMSWTP

Sequences:

>Translated_510_residues
MRTILCFRIWPAAMVLICLIVLCGRAEATPVAATLSPESAQVTEVSRLSVRMEGGGEGRAVLILPGPAKPESLKIFPVED
PALKISSLSWRALTDKGSAVNDAKRKQHRSLTAERNRLAAEIKGLEARIAFWQSQTKAKTRSLNDAVNLSAVISRNTKKA
WQEKMTLEEEREELDQRIATLQAEMKNPREAAKADWEVSLSLLGLKPESRSIILRYSYTLSDCGWKPLYRLEANPGQERV
SFSWEAEVWQNSPHDWAGVELSLATHPEGTPTVPDKAPEWRIGVEKTGARQASKKTEKTEAAGTPMRNPVAPFFRFLGTR
SVPAGQKVVLPVESANWPAVFTRILKPFSGRNAEMRAVITLPSPVTIPENPALFLRDGVLLGRREFGFSGREKSLLFGSC
PDVQAEINMLSEPGNAPAFDANKQVWDWRWQTVVKNEGGKLLKVRVEEPVPQIRDRRITFAMTGEPGYPEEKAEMGVREL
ELPPGTGRTLETFLHIAAPRDLNVEMSWTP
>Mature_510_residues
MRTILCFRIWPAAMVLICLIVLCGRAEATPVAATLSPESAQVTEVSRLSVRMEGGGEGRAVLILPGPAKPESLKIFPVED
PALKISSLSWRALTDKGSAVNDAKRKQHRSLTAERNRLAAEIKGLEARIAFWQSQTKAKTRSLNDAVNLSAVISRNTKKA
WQEKMTLEEEREELDQRIATLQAEMKNPREAAKADWEVSLSLLGLKPESRSIILRYSYTLSDCGWKPLYRLEANPGQERV
SFSWEAEVWQNSPHDWAGVELSLATHPEGTPTVPDKAPEWRIGVEKTGARQASKKTEKTEAAGTPMRNPVAPFFRFLGTR
SVPAGQKVVLPVESANWPAVFTRILKPFSGRNAEMRAVITLPSPVTIPENPALFLRDGVLLGRREFGFSGREKSLLFGSC
PDVQAEINMLSEPGNAPAFDANKQVWDWRWQTVVKNEGGKLLKVRVEEPVPQIRDRRITFAMTGEPGYPEEKAEMGVREL
ELPPGTGRTLETFLHIAAPRDLNVEMSWTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56743; Mature: 56743

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTILCFRIWPAAMVLICLIVLCGRAEATPVAATLSPESAQVTEVSRLSVRMEGGGEGRA
CCEEEEEEHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHEEEEEEEEEECCCCCCCE
VLILPGPAKPESLKIFPVEDPALKISSLSWRALTDKGSAVNDAKRKQHRSLTAERNRLAA
EEEECCCCCCCCEEEEECCCCCEEEECCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
EIKGLEARIAFWQSQTKAKTRSLNDAVNLSAVISRNTKKAWQEKMTLEEEREELDQRIAT
HHCCCEEEEEEHHHHHHHHHHCCCHHHCEEHEECCCHHHHHHHHHHHHHHHHHHHHHHHH
LQAEMKNPREAAKADWEVSLSLLGLKPESRSIILRYSYTLSDCGWKPLYRLEANPGQERV
HHHHHCCCHHHHCCCCEEEEEEEECCCCCCEEEEEEEEEECCCCCCCEEEEECCCCCCCE
SFSWEAEVWQNSPHDWAGVELSLATHPEGTPTVPDKAPEWRIGVEKTGARQASKKTEKTE
EEEEEHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHH
AAGTPMRNPVAPFFRFLGTRSVPAGQKVVLPVESANWPAVFTRILKPFSGRNAEMRAVIT
HCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCEEEEEEE
LPSPVTIPENPALFLRDGVLLGRREFGFSGREKSLLFGSCPDVQAEINMLSEPGNAPAFD
CCCCCCCCCCCCEEEECCEEECCHHCCCCCCCCCEEEECCCCCHHHHHHHCCCCCCCCCC
ANKQVWDWRWQTVVKNEGGKLLKVRVEEPVPQIRDRRITFAMTGEPGYPEEKAEMGVREL
CCCCEEEEEEEEEEECCCCCEEEEEECCCCCHHHCCEEEEEEECCCCCCHHHHHCCCEEE
ELPPGTGRTLETFLHIAAPRDLNVEMSWTP
ECCCCCCHHHHHHHHHCCCCCCCEEEECCC
>Mature Secondary Structure
MRTILCFRIWPAAMVLICLIVLCGRAEATPVAATLSPESAQVTEVSRLSVRMEGGGEGRA
CCEEEEEEHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHEEEEEEEEEECCCCCCCE
VLILPGPAKPESLKIFPVEDPALKISSLSWRALTDKGSAVNDAKRKQHRSLTAERNRLAA
EEEECCCCCCCCEEEEECCCCCEEEECCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
EIKGLEARIAFWQSQTKAKTRSLNDAVNLSAVISRNTKKAWQEKMTLEEEREELDQRIAT
HHCCCEEEEEEHHHHHHHHHHCCCHHHCEEHEECCCHHHHHHHHHHHHHHHHHHHHHHHH
LQAEMKNPREAAKADWEVSLSLLGLKPESRSIILRYSYTLSDCGWKPLYRLEANPGQERV
HHHHHCCCHHHHCCCCEEEEEEEECCCCCCEEEEEEEEEECCCCCCCEEEEECCCCCCCE
SFSWEAEVWQNSPHDWAGVELSLATHPEGTPTVPDKAPEWRIGVEKTGARQASKKTEKTE
EEEEEHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHH
AAGTPMRNPVAPFFRFLGTRSVPAGQKVVLPVESANWPAVFTRILKPFSGRNAEMRAVIT
HCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCEEEEEEE
LPSPVTIPENPALFLRDGVLLGRREFGFSGREKSLLFGSCPDVQAEINMLSEPGNAPAFD
CCCCCCCCCCCCEEEECCEEECCHHCCCCCCCCCEEEECCCCCHHHHHHHCCCCCCCCCC
ANKQVWDWRWQTVVKNEGGKLLKVRVEEPVPQIRDRRITFAMTGEPGYPEEKAEMGVREL
CCCCEEEEEEEEEEECCCCCEEEEEECCCCCHHHCCEEEEEEECCCCCCHHHHHCCCEEE
ELPPGTGRTLETFLHIAAPRDLNVEMSWTP
ECCCCCCHHHHHHHHHCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA