Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

Click here to switch to the map view.

The map label for this gene is 85859121

Identifier: 85859121

GI number: 85859121

Start: 1300450

End: 1300734

Strand: Direct

Name: 85859121

Synonym: SYN_01510

Alternate gene names: NA

Gene position: 1300450-1300734 (Clockwise)

Preceding gene: 85859120

Following gene: 85859122

Centisome position: 40.9

GC content: 46.32

Gene sequence:

>285_bases
ATGACATCCGAAAATAACATGAAGTGGTTATGGAGGACTTGCACCATCTGGATCGACAAACGCGAAAGAAGATCGTTGAC
AGGGTTAAAGATTACCTTTGACAAGATCCTGTGGGGTTGGGGAAGCTTCTGGGGGGGAATGTTCCGGGGAGTTTATCGCT
ATCGTTGCGGCAACTACCGGATCATCTATACCGTGGATCAGGAAGGCATGACGGTCATGATCCTGAGAACAGCAAATCGA
AAAAACGTTTATGAAGATCCTGTTGACCGACAATTACCTGACTAA

Upstream 100 bases:

>100_bases
GATCACTTGAAACAACCCTGACAATAGATAACTACCGAGTCGATTTCGTGACGCCGTATAAAATAGGGACTGAGCCCGTG
CTCAGCAACAACTGATGTGA

Downstream 100 bases:

>100_bases
AAATTCTTGAAAAATACTAAATAATGGTATATTTTAAATCATCATGTGGACGGTGACCGTCGCAAGGCAGGCATTAAAGC
AGATTAACCGCCTACCTTCC

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 93

Protein sequence:

>94_residues
MTSENNMKWLWRTCTIWIDKRERRSLTGLKITFDKILWGWGSFWGGMFRGVYRYRCGNYRIIYTVDQEGMTVMILRTANR
KNVYEDPVDRQLPD

Sequences:

>Translated_94_residues
MTSENNMKWLWRTCTIWIDKRERRSLTGLKITFDKILWGWGSFWGGMFRGVYRYRCGNYRIIYTVDQEGMTVMILRTANR
KNVYEDPVDRQLPD
>Mature_93_residues
TSENNMKWLWRTCTIWIDKRERRSLTGLKITFDKILWGWGSFWGGMFRGVYRYRCGNYRIIYTVDQEGMTVMILRTANRK
NVYEDPVDRQLPD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11406; Mature: 11275

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSENNMKWLWRTCTIWIDKRERRSLTGLKITFDKILWGWGSFWGGMFRGVYRYRCGNYR
CCCCCCCEEEEEEEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHEEECCCEE
IIYTVDQEGMTVMILRTANRKNVYEDPVDRQLPD
EEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TSENNMKWLWRTCTIWIDKRERRSLTGLKITFDKILWGWGSFWGGMFRGVYRYRCGNYR
CCCCCCEEEEEEEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHEEECCCEE
IIYTVDQEGMTVMILRTANRKNVYEDPVDRQLPD
EEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA