| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
Click here to switch to the map view.
The map label for this gene is 85859119
Identifier: 85859119
GI number: 85859119
Start: 1298305
End: 1299000
Strand: Direct
Name: 85859119
Synonym: SYN_01512
Alternate gene names: NA
Gene position: 1298305-1299000 (Clockwise)
Preceding gene: 85859117
Following gene: 85859120
Centisome position: 40.84
GC content: 50.86
Gene sequence:
>696_bases ATGCTTCCATTGATCTCCTGGAACGGATATACAGACTTTATCGAGAACAGATCTGTCCCATACCGGGATATCGTATCGAA GTACGGGATACGGGATGCCGTGACGCTCCGAAATCTGGCTGTGTACCTGATGACAAACATCGGACGCCTGACGAGTATTT CCAATCTCAAAAAGACCTTCGACGTTTCCCAGGATAAAATTGAGAATTACGCATCGGCGCTGCTGGAAACCTATCTTGTC CATCGGGTGCCGAAATTTTCCTGGTCCCTGAAGCGAAGCCTCCGGGAACGTTTCAAGATATACGCTGTCGATACAGGACT TCGCAATCGCGTTGCCTTTTCCTTTTCGGAGGACTCCGGTTGGCTGGTGGAGAACGTCGTGCTGAATCATTTACAGAGGC AGTTTGAAGAAATATATTTTGAAAGCACCAGCGGGGAGATTGATTTTGTCGTCAAGGAAGGTGTCGGCTTAACGCAGCGC ATTCAGGTCTGGTATGCCGATCCAGCCGATACGGATATCCCGGAGAGAGAGCTTCGGTGCTGGACCGGCTCGAAGACCTC GCATGAGGAAGCCCGGCCATCGCGGACAGACCGGATCCGGAATATCCTGATCACCAACGATCTCGAAAAGGAACTGGCGC TGGGTGAGACAAAAGTTGAGTGTCTGCCCGTAATCCTTTTTCTTCTGGGCAAATAG
Upstream 100 bases:
>100_bases TCAACCCTTATGGCACAGATGATCGGCGCTCTTCTGGATCTCGGGAAAAAACCGGTTCAGATTCTGCGGATTAATTTGGA AGAGCCGCTTTTTTCCGCTG
Downstream 100 bases:
>100_bases GGGCGGCGCCTGCCTATAATCAATAGGGACGGCGCCCTTTTTTGCGTGAAAATAGAATCAACTCCTGTTGCTTGCCGGGC TGGTCAGGATTGACAGTCAT
Product: ATPase
Products: NA
Alternate protein names: ATPase Of AAA Superfamily; AAA Family ATPase; AAA ATPase; AAA/ Superfamily Protein; ATPase AAA Superfamily; Universally Conserved Protein; ATPase ATPase
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MLPLISWNGYTDFIENRSVPYRDIVSKYGIRDAVTLRNLAVYLMTNIGRLTSISNLKKTFDVSQDKIENYASALLETYLV HRVPKFSWSLKRSLRERFKIYAVDTGLRNRVAFSFSEDSGWLVENVVLNHLQRQFEEIYFESTSGEIDFVVKEGVGLTQR IQVWYADPADTDIPERELRCWTGSKTSHEEARPSRTDRIRNILITNDLEKELALGETKVECLPVILFLLGK
Sequences:
>Translated_231_residues MLPLISWNGYTDFIENRSVPYRDIVSKYGIRDAVTLRNLAVYLMTNIGRLTSISNLKKTFDVSQDKIENYASALLETYLV HRVPKFSWSLKRSLRERFKIYAVDTGLRNRVAFSFSEDSGWLVENVVLNHLQRQFEEIYFESTSGEIDFVVKEGVGLTQR IQVWYADPADTDIPERELRCWTGSKTSHEEARPSRTDRIRNILITNDLEKELALGETKVECLPVILFLLGK >Mature_231_residues MLPLISWNGYTDFIENRSVPYRDIVSKYGIRDAVTLRNLAVYLMTNIGRLTSISNLKKTFDVSQDKIENYASALLETYLV HRVPKFSWSLKRSLRERFKIYAVDTGLRNRVAFSFSEDSGWLVENVVLNHLQRQFEEIYFESTSGEIDFVVKEGVGLTQR IQVWYADPADTDIPERELRCWTGSKTSHEEARPSRTDRIRNILITNDLEKELALGETKVECLPVILFLLGK
Specific function: Unknown
COG id: COG1373
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26760; Mature: 26760
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPLISWNGYTDFIENRSVPYRDIVSKYGIRDAVTLRNLAVYLMTNIGRLTSISNLKKTF CCCEECCCCCHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH DVSQDKIENYASALLETYLVHRVPKFSWSLKRSLRERFKIYAVDTGLRNRVAFSFSEDSG CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEECCCCCCCEEEEECCCCC WLVENVVLNHLQRQFEEIYFESTSGEIDFVVKEGVGLTQRIQVWYADPADTDIPERELRC HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCHHHHEE WTGSKTSHEEARPSRTDRIRNILITNDLEKELALGETKVECLPVILFLLGK ECCCCCCCHHCCCCHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MLPLISWNGYTDFIENRSVPYRDIVSKYGIRDAVTLRNLAVYLMTNIGRLTSISNLKKTF CCCEECCCCCHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH DVSQDKIENYASALLETYLVHRVPKFSWSLKRSLRERFKIYAVDTGLRNRVAFSFSEDSG CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEECCCCCCCEEEEECCCCC WLVENVVLNHLQRQFEEIYFESTSGEIDFVVKEGVGLTQRIQVWYADPADTDIPERELRC HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCHHHHEE WTGSKTSHEEARPSRTDRIRNILITNDLEKELALGETKVECLPVILFLLGK ECCCCCCCHHCCCCHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA