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The map label for this gene is 85859104

Identifier: 85859104

GI number: 85859104

Start: 1281660

End: 1282454

Strand: Direct

Name: 85859104

Synonym: SYN_01340

Alternate gene names: NA

Gene position: 1281660-1282454 (Clockwise)

Preceding gene: 85859096

Following gene: 85859105

Centisome position: 40.31

GC content: 56.86

Gene sequence:

>795_bases
ATGGAAGATATCCTGAAATACCTGCAGGTTCATGTGCCGTTTCGCATGCTGGAGGGCGGCTTCCTGGATACGGTCATCGC
GAAGGGAATTTCCCCGGAAATCGGCTTTGACTGTGCCATCCTGGATGCCACCGGAAAAGACAGATTCCGGGAGGTGGCGG
ACCGATTTTCCGATGCCGGGCTGCGGGTCACCTTTCATGCCCCTTTCATGGATCTCCGGCCGGGCGCCATCGATCCCCGA
ATCCGCGAGGTTTCCCGGGAACGGATTCAACAGGTGTTCGATCTCGTTCCTCTGTTCCGTCCGCGGACCATTGTCTGTCA
TCCCTCCTTCGACTCCAGGTATTACGTTTCCTCGGAGAGGAAGTGGCTGGAAAACAGCACCCTGACCTGGAGCACCTTTG
TGGAGCAGGCGGCGGAGTTCGATACGCTCCTGCTTTTGGAAAATGTATACGAAAAGGAACCCCGCCAGTTCGTCCATCTC
TTGACAGCCCTCGATTCCCTCCGAGTTCGCTTCTGCCTCGATACCGGCCACTGCAACGCCTTTTCCGATGCCCCGCTGTC
GTCGTGGCTGGAAGAACTGGGGACCTTTCTTGGGGAAGTGCATCTCCACGACAACGACGGGAGTCGGGACGCGCACCTTC
CCATCGGCGAGGGGAATTTCCCTTTTATGGAACTGTTCGGCTTCCTCAAGACAAAAGTGAACAGACCGATCCTGACCCTG
GAGGCCCATTCAGCGGATCATCTGAGCAGAACGCTGGAAACGCTCCGCAAAAACAGGCTTTTCGGGCTGATCTGA

Upstream 100 bases:

>100_bases
GGTAATCGCGGGGAATTGGCGGTTGTGCAACAGGAGTACTTGTGATAAAGGAAACTCGCAGTAAAATCAAGAAACAAGAA
AGAGAAGGGCCTTTTCTTTC

Downstream 100 bases:

>100_bases
ATTCCGGGAGAATAGGGAAACCATGCTGCGCTACATCCTGAAACGCCTGCTCTTCATGATTCCCCTGCTCATCGGGATCT
CGATCATCTGTTTTGCCGTG

Product: endonuclease IV

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MEDILKYLQVHVPFRMLEGGFLDTVIAKGISPEIGFDCAILDATGKDRFREVADRFSDAGLRVTFHAPFMDLRPGAIDPR
IREVSRERIQQVFDLVPLFRPRTIVCHPSFDSRYYVSSERKWLENSTLTWSTFVEQAAEFDTLLLLENVYEKEPRQFVHL
LTALDSLRVRFCLDTGHCNAFSDAPLSSWLEELGTFLGEVHLHDNDGSRDAHLPIGEGNFPFMELFGFLKTKVNRPILTL
EAHSADHLSRTLETLRKNRLFGLI

Sequences:

>Translated_264_residues
MEDILKYLQVHVPFRMLEGGFLDTVIAKGISPEIGFDCAILDATGKDRFREVADRFSDAGLRVTFHAPFMDLRPGAIDPR
IREVSRERIQQVFDLVPLFRPRTIVCHPSFDSRYYVSSERKWLENSTLTWSTFVEQAAEFDTLLLLENVYEKEPRQFVHL
LTALDSLRVRFCLDTGHCNAFSDAPLSSWLEELGTFLGEVHLHDNDGSRDAHLPIGEGNFPFMELFGFLKTKVNRPILTL
EAHSADHLSRTLETLRKNRLFGLI
>Mature_264_residues
MEDILKYLQVHVPFRMLEGGFLDTVIAKGISPEIGFDCAILDATGKDRFREVADRFSDAGLRVTFHAPFMDLRPGAIDPR
IREVSRERIQQVFDLVPLFRPRTIVCHPSFDSRYYVSSERKWLENSTLTWSTFVEQAAEFDTLLLLENVYEKEPRQFVHL
LTALDSLRVRFCLDTGHCNAFSDAPLSSWLEELGTFLGEVHLHDNDGSRDAHLPIGEGNFPFMELFGFLKTKVNRPILTL
EAHSADHLSRTLETLRKNRLFGLI

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ1614 and MJ0008 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: NA

Molecular weight: Translated: 30298; Mature: 30298

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDILKYLQVHVPFRMLEGGFLDTVIAKGISPEIGFDCAILDATGKDRFREVADRFSDAG
CHHHHHHHHHHCCHHHHCCCHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCC
LRVTFHAPFMDLRPGAIDPRIREVSRERIQQVFDLVPLFRPRTIVCHPSFDSRYYVSSER
EEEEEECCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEECCCH
KWLENSTLTWSTFVEQAAEFDTLLLLENVYEKEPRQFVHLLTALDSLRVRFCLDTGHCNA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCC
FSDAPLSSWLEELGTFLGEVHLHDNDGSRDAHLPIGEGNFPFMELFGFLKTKVNRPILTL
CCCCCHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEE
EAHSADHLSRTLETLRKNRLFGLI
ECCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEDILKYLQVHVPFRMLEGGFLDTVIAKGISPEIGFDCAILDATGKDRFREVADRFSDAG
CHHHHHHHHHHCCHHHHCCCHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCC
LRVTFHAPFMDLRPGAIDPRIREVSRERIQQVFDLVPLFRPRTIVCHPSFDSRYYVSSER
EEEEEECCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEECCCH
KWLENSTLTWSTFVEQAAEFDTLLLLENVYEKEPRQFVHLLTALDSLRVRFCLDTGHCNA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCC
FSDAPLSSWLEELGTFLGEVHLHDNDGSRDAHLPIGEGNFPFMELFGFLKTKVNRPILTL
CCCCCHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEE
EAHSADHLSRTLETLRKNRLFGLI
ECCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]